Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_G02
(699 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0263 + 1743661-1743694,1744939-1745236,1745318-1745417,174... 45 5e-05
07_03_0250 - 15822602-15822650,15822744-15822814,15822908-158230... 42 6e-04
05_06_0271 + 26836396-26836610,26836793-26836872,26837573-268376... 42 6e-04
09_04_0537 + 18410201-18410207,18410301-18410586,18410674-184107... 41 8e-04
01_06_0403 - 29060712-29060732,29061260-29061334,29061596-290617... 40 0.003
01_07_0035 + 40637102-40637197,40638594-40638948,40639664-406397... 39 0.004
06_03_0709 - 23759162-23759455,23759681-23759761,23759847-237599... 38 0.008
03_05_0960 + 29221087-29221091,29221370-29221468,29221773-292218... 37 0.013
02_03_0040 + 14262137-14262182,14262456-14262738,14262824-142629... 36 0.023
02_01_0264 - 1748883-1748888,1748943-1749017,1749453-1749868,175... 36 0.023
09_02_0102 - 4295329-4295366,4295622-4295702,4295946-4296252,429... 36 0.041
08_02_1133 + 24554037-24554043,24554524-24554797,24554890-245549... 34 0.094
05_03_0218 - 10437377-10437622,10437896-10438141,10438528-104386... 28 6.2
05_02_0072 - 6334613-6335215 28 8.2
03_02_0422 - 8308711-8309100,8309197-8310724,8311394-8313411 28 8.2
>02_01_0263 +
1743661-1743694,1744939-1745236,1745318-1745417,
1745500-1745766,1745859-1745936,1746023-1746124,
1746205-1746254,1746347-1746446,1746550-1746648,
1746742-1746858,1747187-1747313,1747396-1747793,
1747900-1748004
Length = 624
Score = 45.2 bits (102), Expect = 5e-05
Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 13/152 (8%)
Frame = +2
Query: 29 QDGRRLIIYRIGCWDPKVIP------------IEDLFKATILALELGMLEPRTQILGGVA 172
+DGR + I R+G DP + +++ ++ ++ L + I
Sbjct: 167 KDGRPVYIERLGKVDPNKLMHVTTMDRYVRYHVKEFERSFLIKFPACSLAAKRHIDSSTT 226
Query: 173 LFDLQDLGTQHAWQCTPSVAAKIVKILVSCYPANTYAIHIVNNSWIFDKIYNIFKPLLDN 352
+ D+Q +G ++ + + ++ KI YP Y + IVN F ++N K LD
Sbjct: 227 ILDVQGVGLKNFSKTARELIVRLQKIDNDNYPETLYQMFIVNAGPGFRLLWNTVKSFLDP 286
Query: 353 VMRSKIYFHGSDLTS-LHKHIDPDHLPERYGG 445
SKI+ G+ S L + ID LPE GG
Sbjct: 287 KTTSKIHVLGNKYQSKLLEVIDASELPEFLGG 318
>07_03_0250 -
15822602-15822650,15822744-15822814,15822908-15823006,
15823235-15823309,15823808-15823885,15823990-15824098,
15824167-15824216,15824310-15824411,15824994-15825071,
15825419-15825685,15825863-15825962,15826137-15826315
Length = 418
Score = 41.5 bits (93), Expect = 6e-04
Identities = 24/93 (25%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Frame = +2
Query: 170 ALFDLQDLGTQHAWQCTPSVAAKIVKILVSCYPANTYAIHIVNNSWIFDKIYNIFKPLLD 349
A+FD++ LG + + + +I KI + YP ++I+N F ++ + K ++
Sbjct: 175 AIFDVKGLGMNNFSKSGRDLFIEIQKIDSNYYPETLNQLYIINAGAGFRALWKVLKACME 234
Query: 350 NVMRSKIYFHGSD-LTSLHKHIDPDHLPERYGG 445
+KI G++ L+++ + +DP +LP+ GG
Sbjct: 235 ARTLAKIQVLGTNYLSTILEAVDPSNLPDFLGG 267
>05_06_0271 +
26836396-26836610,26836793-26836872,26837573-26837641,
26837694-26837985,26838303-26838399,26838478-26838744,
26838832-26838909,26839019-26839120,26839251-26839300,
26839383-26839482,26839645-26839743,26839840-26839968,
26840319-26840427,26840652-26841055,26841140-26841280,
26841373-26841393
Length = 750
Score = 41.5 bits (93), Expect = 6e-04
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Frame = +2
Query: 173 LFDLQDLGTQHAWQCTPSVAAKIVKILVSCYPANTYAIHIVNNSWIFDKIYNIFKPLLDN 352
+ D+Q +G ++ + + ++ KI YP ++I+N F +++ K LD
Sbjct: 334 ILDVQGVGLKNFSKAARDLITRLQKIDNDNYPETLRRMYIINAGQGFKMLWSTVKSFLDP 393
Query: 353 VMRSKIYFHGSDL-TSLHKHIDPDHLPERYGG 445
SKI+ GS L + ID + LPE +GG
Sbjct: 394 KTASKIHVLGSKYQNKLLEIIDENELPEFFGG 425
>09_04_0537 +
18410201-18410207,18410301-18410586,18410674-18410773,
18410881-18411147,18411286-18411363,18411444-18411545,
18411628-18411677,18411793-18411889,18412248-18412361,
18412495-18412666,18412865-18413217,18413812-18413898,
18413981-18414001
Length = 577
Score = 41.1 bits (92), Expect = 8e-04
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 1/104 (0%)
Frame = +2
Query: 137 LEPRTQILGGVALFDLQDLGTQHAWQCTPSVAAKIVKILVSCYPANTYAIHIVNNSWIFD 316
L + I + D+ +G ++ + + ++ KI YP + +++VN F
Sbjct: 202 LAAKRHIDSTTTILDVHGVGLKNFSKTARELVHRMQKIDSDYYPETLHQMYVVNAGSGFK 261
Query: 317 KIYNIFKPLLDNVMRSKIYFHGSDLTS-LHKHIDPDHLPERYGG 445
I+N K LD SKI+ G++ S L + ID LPE GG
Sbjct: 262 LIWNSVKGFLDPKTSSKIHVLGTNYQSRLLEVIDKSELPEFLGG 305
>01_06_0403 -
29060712-29060732,29061260-29061334,29061596-29061762,
29061841-29061996,29062412-29062535,29062949-29063047,
29063155-29063254,29063331-29063380,29063461-29063562,
29063709-29063786,29063865-29064131,29064225-29064321,
29064446-29064746,29066714-29066805,29066890-29067005,
29067445-29067519,29067846-29067911,29068206-29068262,
29068381-29068430,29068518-29068688,29068969-29069060,
29069124-29069281
Length = 837
Score = 39.5 bits (88), Expect = 0.003
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Frame = +2
Query: 173 LFDLQDLGTQHAWQCTPSVAAKIVKILVSCYPANTYAIHIVNNSWIFDKIYNIFKPLLDN 352
+ D+Q +G ++ + + ++ KI YP + ++I+N F ++ K LD
Sbjct: 508 ILDVQGVGLKNFSKDARELIMRLQKINNDNYPETLHRLYIINAGQGFKMLWGTIKSFLDP 567
Query: 353 VMRSKIYFHGSDL-TSLHKHIDPDHLPERYGG 445
SKI+ GS L + ID LP+ GG
Sbjct: 568 QTASKIHVLGSKYQNKLLETIDESELPDFLGG 599
>01_07_0035 +
40637102-40637197,40638594-40638948,40639664-40639700,
40639850-40639955,40640086-40640196,40640334-40640468
Length = 279
Score = 38.7 bits (86), Expect = 0.004
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 2/95 (2%)
Frame = +2
Query: 167 VALFDLQDLGTQHAWQCTPSVAAKIVKILVSCYPANTYAIHIVNNSWIFDKIYNIFKPLL 346
V + DL+ G + C ++I+ + YP +++ ++F K + + P +
Sbjct: 172 VCIVDLKGWGYSN---CDIRAYIAAIEIMQNYYPERLGKALMIHVPYMFMKAWKMIYPFI 228
Query: 347 DNVMRSKIYF--HGSDLTSLHKHIDPDHLPERYGG 445
DNV R K F S LH+ ID +P+ GG
Sbjct: 229 DNVTRDKFVFVDDKSLQEVLHQEIDDSQIPDTLGG 263
>06_03_0709 -
23759162-23759455,23759681-23759761,23759847-23759948,
23760068-23760163,23760256-23760315,23760496-23760549,
23760657-23760695,23761102-23761179,23761476-23761529,
23761797-23761880,23763447-23763475,23763602-23763659
Length = 342
Score = 37.9 bits (84), Expect = 0.008
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +2
Query: 263 YPANTYAIHIVNNSWIFDKIYNIFKPLLDNVMRSKIY-FHGSDLTSLHKHIDPDHLP 430
YP +IVN +IF + + KPLL R K++ HG L K +D LP
Sbjct: 197 YPEKAETYYIVNAPYIFSACWKVVKPLLQERTRKKVHVLHGCGRDELLKIMDHSSLP 253
>03_05_0960 +
29221087-29221091,29221370-29221468,29221773-29221815,
29222056-29222154,29222240-29222485,29222633-29222941
Length = 266
Score = 37.1 bits (82), Expect = 0.013
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
Frame = +2
Query: 218 TP-SVAAKIVKILVSCYPANTYAIHIVNNSWIFDKIYNIFKPLLDNVMRSKIYF----HG 382
TP A + IL + YP + N +F+ + + K LD K+ F +
Sbjct: 127 TPIKTARECANILQNHYPERLAIGILFNPPKVFEAFWKVVKHFLDPKSIQKVNFVYLKNE 186
Query: 383 SDLTSLHKHIDPDHLPERYGG 445
+ LHK+IDP+ LP +GG
Sbjct: 187 ESMKILHKYIDPEVLPVEFGG 207
>02_03_0040 +
14262137-14262182,14262456-14262738,14262824-14262923,
14263027-14263293,14263378-14263455,14263552-14263653,
14263731-14263780,14263864-14263957,14264060-14264161,
14264855-14264960,14265056-14265414,14265572-14265646,
14265890-14265907
Length = 559
Score = 36.3 bits (80), Expect = 0.023
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Frame = +2
Query: 173 LFDLQDLGTQHAWQCTPSVAAKIVKILVSCYPANTYAIHIVNNSWIFDKIYNIFKPLLDN 352
+ D+Q +G + + + ++ KI YP + I+N F +++ K LD
Sbjct: 226 ILDVQGVGMKQFSKAARDLIGQLQKIDGDNYPETLCRMFIINAGPGFRLLWSTVKSFLDP 285
Query: 353 VMRSKIYFHGSDLTS-LHKHIDPDHLPERYGG 445
+KI+ G+ S L + ID LPE +GG
Sbjct: 286 KTTAKIHVLGNKYQSKLLEVIDASELPEFFGG 317
>02_01_0264 -
1748883-1748888,1748943-1749017,1749453-1749868,
1750095-1750215,1750423-1750533,1750636-1750737,
1750896-1750989,1751145-1751194,1751323-1751424,
1751794-1751871,1751999-1752028,1752322-1753050
Length = 637
Score = 36.3 bits (80), Expect = 0.023
Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 3/99 (3%)
Frame = +2
Query: 158 LGGVAL-FDLQDL-GTQHAWQCTPSVAAKIVKILVSCYPANTYAIHIVNNSWIFDKIYNI 331
+ GV L FDL G ++ + + ++ K+ YP + I+N F ++N
Sbjct: 240 VSGVKLNFDLHVCEGYKNFNKAARDLIGRLQKVDGDNYPETLCRMFIINAGQGFRLLWNT 299
Query: 332 FKPLLDNVMRSKIYFHGSDLTS-LHKHIDPDHLPERYGG 445
K LD +KI+ G+ S L + IDP LPE GG
Sbjct: 300 VKSFLDPKTTAKIHVLGNKYQSKLLEVIDPSELPEFLGG 338
>09_02_0102 -
4295329-4295366,4295622-4295702,4295946-4296252,
4296616-4296696,4296818-4296919,4297358-4297396,
4297453-4297548,4297624-4297683,4297942-4297995,
4298230-4298307,4298577-4298630,4298705-4298788,
4300457-4300485,4300666-4300720
Length = 385
Score = 35.5 bits (78), Expect = 0.041
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +2
Query: 263 YPANTYAIHIVNNSWIFDKIYNIFKPLLDNVMRSKI-YFHGSDLTSLHKHIDPDHLP 430
YP T IVN ++F + + KPLL + KI +GS L K +D + LP
Sbjct: 196 YPEKTETYFIVNAPYVFSACWKVVKPLLQERTKRKIKVLYGSGRDELLKVMDYEALP 252
>08_02_1133 +
24554037-24554043,24554524-24554797,24554890-24554989,
24555089-24555355,24555455-24555532,24555616-24555717,
24555798-24555847,24555916-24556051,24556374-24556490,
24556659-24556818,24557450-24557811,24558075-24558152,
24558274-24558294
Length = 583
Score = 34.3 bits (75), Expect = 0.094
Identities = 35/140 (25%), Positives = 58/140 (41%), Gaps = 14/140 (10%)
Frame = +2
Query: 20 YRGQD--GRRLIIYRIGCWDP----KVIPIEDLFKATILALELGMLE--------PRTQI 157
Y G D GR + I R+G DP ++ ++ K + E E + I
Sbjct: 145 YHGVDREGRPVYIERLGKVDPNKLMQITSVDRYIKYHVQEFERAFRERFPACTLAAKRHI 204
Query: 158 LGGVALFDLQDLGTQHAWQCTPSVAAKIVKILVSCYPANTYAIHIVNNSWIFDKIYNIFK 337
+ D+Q +G ++ + + ++ KI YP + + +VN F I+N K
Sbjct: 205 DSTTTILDVQGVGFKNFSKTARELINRMQKIDSDYYPETLHQMFVVNAGSGFKLIWNSVK 264
Query: 338 PLLDNVMRSKIYFHGSDLTS 397
LD SKI+ GS+ S
Sbjct: 265 GFLDPKTSSKIHVLGSNYQS 284
>05_03_0218 -
10437377-10437622,10437896-10438141,10438528-10438611,
10438720-10438854
Length = 236
Score = 28.3 bits (60), Expect = 6.2
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 5/81 (6%)
Frame = +2
Query: 218 TP-SVAAKIVKILVSCYPANTYAIHIVNNSWIFDKIYNIFKPLLDNVMRSKIYFHGSDLT 394
TP S + + + I+ + YP + N IF+ + I K L+ M K+ F ++
Sbjct: 118 TPLSTSRESMHIVQNYYPGIIAVAILSNTPRIFESFWKIIKHFLEAKMSEKVKFLYTNNP 177
Query: 395 SLHKHI----DPDHLPERYGG 445
HK + D D L +GG
Sbjct: 178 ESHKIVSEMFDMDLLETAFGG 198
>05_02_0072 - 6334613-6335215
Length = 200
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -3
Query: 565 DVWVNFLLAELISAIDHFLRHVYVLPQRFEPYSIGIVGPY 446
D+ ++ LLAE I+ + HF H +V FE ++G +
Sbjct: 88 DLVLHLLLAERINTVMHFAAHTHVDDNSFEFTKNNVLGTH 127
>03_02_0422 - 8308711-8309100,8309197-8310724,8311394-8313411
Length = 1311
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -2
Query: 212 AKHAGCQGLANRTKQRHQVFACEVPTFPTPEL 117
A+H G +++ K + VFA E+ T +PEL
Sbjct: 791 AQHLGLMNISDNGKASNHVFAVELDTVLSPEL 822
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,218,731
Number of Sequences: 37544
Number of extensions: 408824
Number of successful extensions: 974
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 950
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 972
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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