Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_G01
(453 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC18G6.14c |rps7||40S ribosomal protein S7|Schizosaccharomyces... 92 3e-20
SPCC576.09 |rps20||40S ribosomal protein S20|Schizosaccharomyces... 27 1.0
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 27 1.3
SPAC767.01c |vps1|SPAC9G1.14c|dynamin family protein Vps1|Schizo... 27 1.8
SPCC1827.08c |pof7|SPCC70.11c|F-box protein Pof7|Schizosaccharom... 26 2.3
SPCC553.06 |||oligosaccharyltransferase subunit|Schizosaccharomy... 25 4.1
SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ... 25 4.1
SPBC359.06 |mug14||adducin|Schizosaccharomyces pombe|chr 2|||Manual 25 7.2
SPCC965.05c |thp1||uracil DNA N-glycosylase Thp1 |Schizosaccharo... 25 7.2
SPBC2A9.10 |||Bin3 family|Schizosaccharomyces pombe|chr 2|||Manual 24 9.5
SPCC16C4.10 |||6-phosphogluconolactonase |Schizosaccharomyces po... 24 9.5
SPAC19A8.02 |||transcriptional coactivator |Schizosaccharomyces ... 24 9.5
SPCC4F11.04c |||mannosyltransferase complex subunit |Schizosacch... 24 9.5
SPAC227.01c ||SPAPB21F2.04c|Erd1 homolog|Schizosaccharomyces pom... 24 9.5
>SPAC18G6.14c |rps7||40S ribosomal protein S7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 195
Score = 92.3 bits (219), Expect = 3e-20
Identities = 45/98 (45%), Positives = 68/98 (69%), Gaps = 2/98 (2%)
Frame = +1
Query: 166 KILKAGAIEPDTFETSISQALVELETNS-DLKAQLRELYITKAKEIELHN-KKSIIIYVP 339
KI+K + +P + ++Q L +LE++S D+ +LR L IT A+E+E+ KK+I+++VP
Sbjct: 6 KIVKRSSSQPTETDLLVAQCLYDLESSSKDMAKELRPLQITSAREVEVGGGKKAIVVFVP 65
Query: 340 MPKLKAFQKIQIRLVRELEKKFSGKHVVXVGDRKILAK 453
P LKAF K Q RL RELEKKF+ +HV+ + R+IL K
Sbjct: 66 QPLLKAFHKCQARLTRELEKKFADRHVIFIAQRRILPK 103
>SPCC576.09 |rps20||40S ribosomal protein S20|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 118
Score = 27.5 bits (58), Expect = 1.0
Identities = 14/59 (23%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +1
Query: 136 LSRRVFKMSTKILKAGAIEP--DTFETSISQALVELETNSDLKAQLRELYITKAKEIEL 306
L ++ K++T+ G +T+E I + L++L + S++ Q+ ++I E+E+
Sbjct: 56 LPTKILKITTRKTPNGEGSKTWETYEMRIHKRLIDLHSPSEIVKQITSIHIEPGVEVEV 114
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 27.1 bits (57), Expect = 1.3
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Frame = +1
Query: 172 LKAGA-IEPDTFETSISQALVE--LETNSDLKAQLRELY 279
+KA A I+PD FE +I Q L + N LK ++ +LY
Sbjct: 2123 VKANAFIDPDNFEVNIEQTLSKNFFGNNQYLKLKIMQLY 2161
>SPAC767.01c |vps1|SPAC9G1.14c|dynamin family protein
Vps1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 678
Score = 26.6 bits (56), Expect = 1.8
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +1
Query: 328 IYVPMPKLKAFQKIQIRLVRELEKKFSGKHV 420
+++P K F+KI+ +VRE E+K +GK+V
Sbjct: 101 LHLPGQKFFEFEKIREEIVRETEEK-TGKNV 130
>SPCC1827.08c |pof7|SPCC70.11c|F-box protein
Pof7|Schizosaccharomyces pombe|chr 3|||Manual
Length = 361
Score = 26.2 bits (55), Expect = 2.3
Identities = 23/113 (20%), Positives = 44/113 (38%), Gaps = 1/113 (0%)
Frame = +1
Query: 52 LCRYIYPYIVENDFLVATKLVIFYNYLFLSRRVFKMSTKILKAGAIEPDTFETSISQALV 231
+CRY P + + L+ +Y YL R++ ST I+ + EP+ + S
Sbjct: 208 VCRYFRPGTSDTSWNQPIHLITYYRYL----RLYPNSTCIVYQSSNEPNDVVRNFSVQNT 263
Query: 232 ELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAF-QKIQIRLVR 387
L + + + ++I P + + QK+Q+R +R
Sbjct: 264 SLFSPMSSSPMFSNGNVALTGSWSMTPSGEMLIVYPASQTYTYVQKLQVRGIR 316
>SPCC553.06 |||oligosaccharyltransferase subunit|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 271
Score = 25.4 bits (53), Expect = 4.1
Identities = 21/82 (25%), Positives = 34/82 (41%)
Frame = +1
Query: 64 IYPYIVENDFLVATKLVIFYNYLFLSRRVFKMSTKILKAGAIEPDTFETSISQALVELET 243
IYP V + + +L +F L R ++ K+L A E F + Q + +
Sbjct: 95 IYPASVSQGGVASLELRLFDIPTSLLRSDSTLTAKLLVASFGETIPFSLPLGQLSINVPP 154
Query: 244 NSDLKAQLRELYITKAKEIELH 309
+ KA+ L KE+ LH
Sbjct: 155 SLYHKAEFSPLDELSPKEVILH 176
>SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 3655
Score = 25.4 bits (53), Expect = 4.1
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = +1
Query: 169 ILKAGAIEPDTFETSISQALVELETNSDLKAQLRELYITKAKEIEL 306
I + G + +TF+ +SQA ++ + L +RE ++ E +L
Sbjct: 3170 ISRLGVVSKNTFQLPMSQANIQRFAENVLPVSVREAFLRDFVETKL 3215
>SPBC359.06 |mug14||adducin|Schizosaccharomyces pombe|chr 2|||Manual
Length = 257
Score = 24.6 bits (51), Expect = 7.2
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = -1
Query: 228 KSLRDRSLEGVGFYSTRFEDFRTHLEYSTGEKEIV 124
K++R+ + VG Y+ + +F + S GE EI+
Sbjct: 223 KAIRENADNPVGLYTAQQPNFLYEVACSNGELEII 257
>SPCC965.05c |thp1||uracil DNA N-glycosylase Thp1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 325
Score = 24.6 bits (51), Expect = 7.2
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = +1
Query: 172 LKAGAIEPDTFETSISQALVELETNSDLKAQLRELYITKAKEIE 303
L A+E T E + V + S LKA +++ + K E++
Sbjct: 92 LLKSAVETITLENGLRNRRVNVTKKSTLKASVKKSTLKKKNEVD 135
>SPBC2A9.10 |||Bin3 family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 268
Score = 24.2 bits (50), Expect = 9.5
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = +1
Query: 148 VFKMSTKILKAGAIEPDTFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSI 324
VF + + LK I+PD FE ++QA + LE + + + E + + ++ KK I
Sbjct: 204 VFNQTPENLK---IQPDAFEHLLNQAGLVLEYSIEPQVNNSEYKNFAKRTMYIYKKKGI 259
>SPCC16C4.10 |||6-phosphogluconolactonase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 257
Score = 24.2 bits (50), Expect = 9.5
Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = +1
Query: 64 IYPYIVENDFLVATKLVIFYNYL-FLSRRVFKMSTKILKAGAIEPDTFETSISQALVELE 240
I P EN K +IF + F +++ ++ ++LK I+P + LV +
Sbjct: 71 IVPLDDENSNYALCKKLIFDKFEGFDPKKIHTINPELLKENPIDPQNVADEYEKQLVHVF 130
Query: 241 TNS 249
NS
Sbjct: 131 ANS 133
>SPAC19A8.02 |||transcriptional coactivator |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1213
Score = 24.2 bits (50), Expect = 9.5
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -2
Query: 452 LARILRSPTXTTCLPLNFFSNS 387
++ I+RSPT +T P + SNS
Sbjct: 455 VSTIMRSPTISTVPPPKYLSNS 476
>SPCC4F11.04c |||mannosyltransferase complex subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 345
Score = 24.2 bits (50), Expect = 9.5
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -3
Query: 103 LQLKNRFLLCTDKCTDTIIDLWRIHY 26
L N FL+ D+CT II + Y
Sbjct: 24 LYFNNEFLMFADRCTKDIIPSEELRY 49
>SPAC227.01c ||SPAPB21F2.04c|Erd1 homolog|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 373
Score = 24.2 bits (50), Expect = 9.5
Identities = 8/20 (40%), Positives = 10/20 (50%)
Frame = -2
Query: 407 LNFFSNSRTSLIWIFWNAFS 348
L F+ R S +W WN S
Sbjct: 234 LGIFAKKRFSFLWFLWNTSS 253
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,743,038
Number of Sequences: 5004
Number of extensions: 32719
Number of successful extensions: 86
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 86
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 86
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 168258430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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