Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_G01
(453 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0683 + 10363963-10364037,10364112-10364185,10364312-103644... 96 1e-20
05_03_0610 - 16167557-16167679,16168236-16168418,16169291-161694... 81 5e-16
02_02_0695 - 13024639-13024800,13025425-13025607,13025635-13025679 51 5e-07
04_01_0483 + 6343599-6343778,6343886-6344011,6344096-6344173,634... 30 0.76
04_01_0480 + 6279576-6279755,6279863-6279988,6280074-6280151,628... 29 1.3
06_01_0156 + 1171717-1174140 29 2.3
04_04_0378 - 24822436-24822521,24822623-24822738,24823010-248230... 28 3.1
11_08_0095 - 28323425-28323494,28323577-28323657,28323744-283241... 28 4.0
04_01_0485 + 6389646-6389665,6390063-6390123,6390231-6390356,639... 28 4.0
02_02_0226 + 8056785-8057112,8057249-8057517,8057634-8058101,805... 27 7.1
01_01_0823 - 6407635-6407731,6407786-6407857,6409766-6409872 27 7.1
>03_02_0683 +
10363963-10364037,10364112-10364185,10364312-10364435,
10365047-10365229,10365478-10365600
Length = 192
Score = 96.3 bits (229), Expect = 1e-20
Identities = 48/96 (50%), Positives = 70/96 (72%), Gaps = 2/96 (2%)
Frame = +1
Query: 166 KILKAGAIEPDTFETSISQALVELET-NSDLKAQLRELYITKAKEIELH-NKKSIIIYVP 339
KI K +EP FE S++QA +LE N +LK++L++LYI A ++++ N+K+++I+VP
Sbjct: 7 KIQKEKGLEPSEFEDSVAQAFFDLENGNQELKSELKDLYINNAVQMDIAGNRKAVVIHVP 66
Query: 340 MPKLKAFQKIQIRLVRELEKKFSGKHVVXVGDRKIL 447
KAF+KI +RLVRELEKKFSGK VV V R+I+
Sbjct: 67 YRLRKAFKKIHVRLVRELEKKFSGKDVVIVATRRIV 102
>05_03_0610 -
16167557-16167679,16168236-16168418,16169291-16169414,
16169514-16169626,16169668-16169742
Length = 205
Score = 80.6 bits (190), Expect = 5e-16
Identities = 42/78 (53%), Positives = 58/78 (74%), Gaps = 2/78 (2%)
Frame = +1
Query: 220 QALVELET-NSDLKAQLRELYITKAKEIELH-NKKSIIIYVPMPKLKAFQKIQIRLVREL 393
QA +LE N +LK+ L++LYI A +++L N+K++IIYVP KA++KI +RLVREL
Sbjct: 38 QAFFDLENGNQELKSDLKDLYINGAVQMDLPGNRKAVIIYVPYRLRKAYKKIHVRLVREL 97
Query: 394 EKKFSGKHVVXVGDRKIL 447
EKKFSGK VV V R+I+
Sbjct: 98 EKKFSGKDVVLVATRRIV 115
>02_02_0695 - 13024639-13024800,13025425-13025607,13025635-13025679
Length = 129
Score = 50.8 bits (116), Expect = 5e-07
Identities = 26/58 (44%), Positives = 38/58 (65%)
Frame = +1
Query: 274 LYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVXVGDRKIL 447
+Y+ ++ N K ++I+V KAF+KI +RLV+ELEKKFSGK VV R+I+
Sbjct: 31 MYVCSQMDVAA-NWKVVVIHVLYHLCKAFKKIHVRLVKELEKKFSGKDVVFDATRRIV 87
>04_01_0483 +
6343599-6343778,6343886-6344011,6344096-6344173,
6344859-6344984,6345253-6345354,6345425-6345571,
6345861-6345984,6346992-6347152
Length = 347
Score = 30.3 bits (65), Expect = 0.76
Identities = 18/79 (22%), Positives = 33/79 (41%)
Frame = +1
Query: 124 NYLFLSRRVFKMSTKILKAGAIEPDTFETSISQALVELETNSDLKAQLRELYITKAKEIE 303
+YLF M +K G T E LVE+ D ++ + Y+ +
Sbjct: 79 HYLFSEMDQRFMESKNCAVGCNLMRTHEWLPKGWLVEIRAGGDNMDKMYKFYVYPPHRVR 138
Query: 304 LHNKKSIIIYVPMPKLKAF 360
L++K +++Y+ K+ F
Sbjct: 139 LYSKDDVLLYIKEMKISGF 157
>04_01_0480 +
6279576-6279755,6279863-6279988,6280074-6280151,
6280847-6280972,6281244-6281345,6281416-6281490,
6281852-6281975,6283005-6283107,6283546-6283617,
6283662-6283788,6284125-6284180,6284438-6284453
Length = 394
Score = 29.5 bits (63), Expect = 1.3
Identities = 18/79 (22%), Positives = 33/79 (41%)
Frame = +1
Query: 124 NYLFLSRRVFKMSTKILKAGAIEPDTFETSISQALVELETNSDLKAQLRELYITKAKEIE 303
+YLF + +K G+ T E LVE+ D ++ + Y+ +
Sbjct: 79 DYLFSEMDQCFLESKNHAVGSNLTRTHEWLPKGWLVEIRAGGDNMDKMYKFYVYPPNRVR 138
Query: 304 LHNKKSIIIYVPMPKLKAF 360
L +K ++IY+ K+ F
Sbjct: 139 LFSKDDVLIYIKEMKISGF 157
>06_01_0156 + 1171717-1174140
Length = 807
Score = 28.7 bits (61), Expect = 2.3
Identities = 18/64 (28%), Positives = 29/64 (45%)
Frame = +1
Query: 46 LLLCRYIYPYIVENDFLVATKLVIFYNYLFLSRRVFKMSTKILKAGAIEPDTFETSISQA 225
L+LC + D L + + + NY S V M+ +L+A A P F T+I +
Sbjct: 391 LVLCLVVVVLCGNGDVLFSLRSIESDNYTMSSGGVATMARCLLRAVATSPAAFFTAIDLS 450
Query: 226 LVEL 237
+ L
Sbjct: 451 ITSL 454
>04_04_0378 -
24822436-24822521,24822623-24822738,24823010-24823092,
24823772-24823918,24824004-24824051,24824153-24824353,
24824981-24825152,24825235-24825299,24825813-24825939,
24826436-24826528,24826608-24826696,24826804-24826950,
24827047-24827359,24827474-24828048
Length = 753
Score = 28.3 bits (60), Expect = 3.1
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +1
Query: 166 KILKAGAIEPDTFET--SISQALVELETNSDLKAQLRELYITKAKEIELHN 312
K LK +E D E ISQAL L + S + + +E KEIEL+N
Sbjct: 565 KELKKAKVEHDRKEQLCDISQALAVLASASSVAKERQEFLNLVNKEIELYN 615
>11_08_0095 -
28323425-28323494,28323577-28323657,28323744-28324157,
28324236-28324381,28325911-28326048,28326192-28326224
Length = 293
Score = 27.9 bits (59), Expect = 4.0
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = -1
Query: 195 GFYSTRFEDFRTHLEYSTGEKEIVIEYYQLRCN*KIVFYYVRINVP 58
G S FE F +Y +K+ YQ RC +++ Y+V +N+P
Sbjct: 39 GLPSLLFERFGLFAKYKI-QKKSNTPSYQNRCVLRLILYHVCVNLP 83
>04_01_0485 +
6389646-6389665,6390063-6390123,6390231-6390356,
6390441-6390518,6391304-6391429,6391630-6391731,
6391802-6391948,6392237-6392360,6393608-6393737,
6393908-6394130
Length = 378
Score = 27.9 bits (59), Expect = 4.0
Identities = 10/45 (22%), Positives = 22/45 (48%)
Frame = +1
Query: 226 LVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAF 360
LVE+ D ++ + Y+ + L +K +++Y+ K+ F
Sbjct: 80 LVEIRAGGDNMDKMYKFYVYPPNRVRLFSKDDVLLYIKEMKISGF 124
>02_02_0226 +
8056785-8057112,8057249-8057517,8057634-8058101,
8058198-8058632
Length = 499
Score = 27.1 bits (57), Expect = 7.1
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = -1
Query: 249 RVSLKFNKSLRDRSLEGVGFYSTRFEDFRTHLEYS 145
R+S + +SL++ E +G ++ R++ + H EYS
Sbjct: 454 RISRQEARSLKNNRGEEIGAFTPRYQQQKIHQEYS 488
>01_01_0823 - 6407635-6407731,6407786-6407857,6409766-6409872
Length = 91
Score = 27.1 bits (57), Expect = 7.1
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 223 ALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIY 333
A++E+E N DL + L T+ E H + S++IY
Sbjct: 2 AILEIEDNDDLLSLPGSLANTRIGESPSHQRDSLLIY 38
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,676,627
Number of Sequences: 37544
Number of extensions: 191719
Number of successful extensions: 442
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 442
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 883560296
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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