Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_G01
(453 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75714-1|CAB00058.1| 194|Caenorhabditis elegans Hypothetical pr... 109 9e-25
U64858-7|AAB18285.2| 340|Caenorhabditis elegans Hypothetical pr... 33 0.13
Z48582-3|CAA88464.1| 401|Caenorhabditis elegans Hypothetical pr... 27 4.8
Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical pr... 27 6.4
Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical pr... 27 6.4
Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical p... 27 6.4
U52000-2|AAK68677.1| 529|Caenorhabditis elegans Vang (van gogh/... 27 6.4
U52000-1|AAA96091.1| 532|Caenorhabditis elegans Vang (van gogh/... 27 6.4
U40028-1|AAA81114.2| 392|Caenorhabditis elegans Fucosyl transfe... 27 6.4
AJ745074-1|CAG32980.1| 392|Caenorhabditis elegans alpha1,3-fuco... 27 6.4
AF098506-1|ABN43085.1| 145|Caenorhabditis elegans Hypothetical ... 27 8.4
>Z75714-1|CAB00058.1| 194|Caenorhabditis elegans Hypothetical
protein ZC434.2 protein.
Length = 194
Score = 109 bits (262), Expect = 9e-25
Identities = 52/96 (54%), Positives = 70/96 (72%)
Frame = +1
Query: 166 KILKAGAIEPDTFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMP 345
K+LK+ E +SQAL++LETN D+++QL+ELYI KE+EL NK +IIIYVP+P
Sbjct: 7 KLLKSDGKVVSEIEKQVSQALIDLETNDDVQSQLKELYIVGVKEVELGNKSAIIIYVPVP 66
Query: 346 KLKAFQKIQIRLVRELEKKFSGKHVVXVGDRKILAK 453
+LKAF KI LVRELEKKF G+ ++ + R+IL K
Sbjct: 67 QLKAFHKIHPALVRELEKKFGGRDILILAKRRILPK 102
>U64858-7|AAB18285.2| 340|Caenorhabditis elegans Hypothetical
protein C16D9.6 protein.
Length = 340
Score = 32.7 bits (71), Expect = 0.13
Identities = 21/64 (32%), Positives = 32/64 (50%)
Frame = -1
Query: 243 SLKFNKSLRDRSLEGVGFYSTRFEDFRTHLEYSTGEKEIVIEYYQLRCN*KIVFYYVRIN 64
SL N++ R G F S RF D T + YST K I +YY L + F+++ N
Sbjct: 113 SLAINETWIHRCDHGQLFTSERFND--TRIPYSTVFKGIPDDYYNLFFKSRYAFHHIYTN 170
Query: 63 VPTQ 52
+ ++
Sbjct: 171 ISSE 174
>Z48582-3|CAA88464.1| 401|Caenorhabditis elegans Hypothetical
protein F27E5.1 protein.
Length = 401
Score = 27.5 bits (58), Expect = 4.8
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +1
Query: 193 PDTFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIY--VPMPKLKAFQK 366
PD ++ + S+ ++ + N DL + R I KA + E+H ++ Y +P + A++
Sbjct: 39 PDIYDPAQSEKVLWFDVNLDLPPRQRFQQIAKAYKKEIHAVFDVLNYFLTIIPGVNAWEL 98
Query: 367 IQIRLVRELEK 399
I L+K
Sbjct: 99 IGNMTASALDK 109
>Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 27.1 bits (57), Expect = 6.4
Identities = 18/71 (25%), Positives = 35/71 (49%)
Frame = +1
Query: 172 LKAGAIEPDTFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKL 351
LK A P++ TSI Q L+ ++ + + E ++ +K+IE+H + +
Sbjct: 2204 LKYTASTPES--TSIGQRLLTIKATTSDENDTIEYSLSGSKDIEIHPETGDVTITGQLDY 2261
Query: 352 KAFQKIQIRLV 384
+ QK ++LV
Sbjct: 2262 EKTQKYDLKLV 2272
>Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 27.1 bits (57), Expect = 6.4
Identities = 18/71 (25%), Positives = 35/71 (49%)
Frame = +1
Query: 172 LKAGAIEPDTFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKL 351
LK A P++ TSI Q L+ ++ + + E ++ +K+IE+H + +
Sbjct: 2204 LKYTASTPES--TSIGQRLLTIKATTSDENDTIEYSLSGSKDIEIHPETGDVTITGQLDY 2261
Query: 352 KAFQKIQIRLV 384
+ QK ++LV
Sbjct: 2262 EKTQKYDLKLV 2272
>Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical
protein F25F2.2 protein.
Length = 4307
Score = 27.1 bits (57), Expect = 6.4
Identities = 18/71 (25%), Positives = 35/71 (49%)
Frame = +1
Query: 172 LKAGAIEPDTFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKL 351
LK A P++ TSI Q L+ ++ + + E ++ +K+IE+H + +
Sbjct: 2204 LKYTASTPES--TSIGQRLLTIKATTSDENDTIEYSLSGSKDIEIHPETGDVTITGQLDY 2261
Query: 352 KAFQKIQIRLV 384
+ QK ++LV
Sbjct: 2262 EKTQKYDLKLV 2272
>U52000-2|AAK68677.1| 529|Caenorhabditis elegans Vang (van
gogh/strabismus planarpolarity protein) homolog protein
1, isoform b protein.
Length = 529
Score = 27.1 bits (57), Expect = 6.4
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = -1
Query: 225 SLRDRSLEGVGFYSTRFEDFRTHLE 151
S+++ + E + FY+TRF F HL+
Sbjct: 263 SIQEAATEILRFYTTRFSSFNIHLD 287
>U52000-1|AAA96091.1| 532|Caenorhabditis elegans Vang (van
gogh/strabismus planarpolarity protein) homolog protein
1, isoform a protein.
Length = 532
Score = 27.1 bits (57), Expect = 6.4
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = -1
Query: 225 SLRDRSLEGVGFYSTRFEDFRTHLE 151
S+++ + E + FY+TRF F HL+
Sbjct: 266 SIQEAATEILRFYTTRFSSFNIHLD 290
>U40028-1|AAA81114.2| 392|Caenorhabditis elegans Fucosyl
transferase protein 6 protein.
Length = 392
Score = 27.1 bits (57), Expect = 6.4
Identities = 15/63 (23%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Frame = -1
Query: 267 QLSLQVRVSLKFNKSLR--DRSLEGVGFYSTRFEDFRTHLEYSTGEKEIVIEYYQLRCN* 94
++++ + ++ K+ K L D + V Y+T ++F H++ EK++ + Y+Q R
Sbjct: 282 RMTIPIVLARKYYKDLGVPDSAYIAVDDYAT-LDEFLAHVKKVNKEKDLFLSYHQWRKEW 340
Query: 93 KIV 85
K++
Sbjct: 341 KVI 343
>AJ745074-1|CAG32980.1| 392|Caenorhabditis elegans
alpha1,3-fucosyltransferase protein.
Length = 392
Score = 27.1 bits (57), Expect = 6.4
Identities = 15/63 (23%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Frame = -1
Query: 267 QLSLQVRVSLKFNKSLR--DRSLEGVGFYSTRFEDFRTHLEYSTGEKEIVIEYYQLRCN* 94
++++ + ++ K+ K L D + V Y+T ++F H++ EK++ + Y+Q R
Sbjct: 282 RMTIPIVLARKYYKDLGVPDSAYIAVDDYAT-LDEFLAHVKKVNKEKDLFLSYHQWRKEW 340
Query: 93 KIV 85
K++
Sbjct: 341 KVI 343
>AF098506-1|ABN43085.1| 145|Caenorhabditis elegans Hypothetical
protein H29C22.1 protein.
Length = 145
Score = 26.6 bits (56), Expect = 8.4
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +1
Query: 217 SQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV 336
S+A ++LE N D+ E + K + E +NK+ + Y+
Sbjct: 33 SRAAIKLENNDDVPELFHENFEFKTCKEERYNKEQTVDYI 72
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,567,845
Number of Sequences: 27780
Number of extensions: 180959
Number of successful extensions: 497
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 488
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 497
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 799252350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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