Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_F24
(217 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
U77974-1|AAB36556.1| 276|Tribolium castaneum transcription fact... 25 0.12
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 21 1.1
AJ876407-1|CAI45288.1| 590|Tribolium castaneum phosphatase prot... 21 1.5
AM292341-1|CAL23153.2| 393|Tribolium castaneum gustatory recept... 21 1.9
DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped prot... 20 2.6
AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2 ... 19 4.5
U04271-2|AAA03709.1| 490|Tribolium castaneum alpha-amylase II p... 19 5.9
U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein. 19 7.8
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 19 7.8
AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory recept... 19 7.8
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 19 7.8
AF243042-1|AAF68438.1| 126|Tribolium castaneum mutant transcrip... 19 7.8
AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B prot... 19 7.8
>U77974-1|AAB36556.1| 276|Tribolium castaneum transcription factor
homolog protein.
Length = 276
Score = 24.6 bits (51), Expect = 0.12
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +2
Query: 32 VPT*SSNRSAPVRTERNRSPL 94
VPT SS RS+PV+++ + SP+
Sbjct: 223 VPTKSSPRSSPVQSDVSLSPV 243
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 21.4 bits (43), Expect = 1.1
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -1
Query: 94 QRTSVSLRSYWRRSVRTS 41
QRTS S +Y RSV TS
Sbjct: 87 QRTSTSNPTYSSRSVMTS 104
>AJ876407-1|CAI45288.1| 590|Tribolium castaneum phosphatase
protein.
Length = 590
Score = 21.0 bits (42), Expect = 1.5
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -3
Query: 128 SQL*LFMTQTLPKDFGFSPFLLAQIGSNFTLVQS*RHAF 12
S+L F+T+T+ + L Q+GS TLV +A+
Sbjct: 51 SELIPFLTETIYDEDEVLLALAEQLGSFITLVGGPEYAY 89
>AM292341-1|CAL23153.2| 393|Tribolium castaneum gustatory
receptor candidate 20 protein.
Length = 393
Score = 20.6 bits (41), Expect = 1.9
Identities = 6/12 (50%), Positives = 10/12 (83%)
Frame = +1
Query: 46 FEPICASKNGEK 81
F P+C+S+ G+K
Sbjct: 27 FLPVCSSQKGQK 38
>DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped
protein.
Length = 126
Score = 20.2 bits (40), Expect = 2.6
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = -3
Query: 182 PSEPAHSPSPTF 147
P PA+SP P++
Sbjct: 22 PHNPAYSPPPSY 33
>AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2
protein protein.
Length = 301
Score = 19.4 bits (38), Expect = 4.5
Identities = 6/16 (37%), Positives = 13/16 (81%)
Frame = +2
Query: 50 NRSAPVRTERNRSPLA 97
N+SAP+ T+ + +P++
Sbjct: 145 NKSAPILTKTSPTPVS 160
>U04271-2|AAA03709.1| 490|Tribolium castaneum alpha-amylase II
protein.
Length = 490
Score = 19.0 bits (37), Expect = 5.9
Identities = 5/8 (62%), Positives = 6/8 (75%)
Frame = +1
Query: 112 NNYNCEHK 135
N Y CEH+
Sbjct: 375 NGYGCEHR 382
>U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein.
Length = 283
Score = 18.6 bits (36), Expect = 7.8
Identities = 8/25 (32%), Positives = 13/25 (52%)
Frame = -1
Query: 190 GEFRRNQHTRHRRLSAVYLCVHSYN 116
G+F N H + ++L Y +YN
Sbjct: 47 GDFFGNHHIQQQQLQYGYHNHQNYN 71
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 18.6 bits (36), Expect = 7.8
Identities = 8/25 (32%), Positives = 13/25 (52%)
Frame = -1
Query: 190 GEFRRNQHTRHRRLSAVYLCVHSYN 116
G+F N H + ++L Y +YN
Sbjct: 47 GDFFGNHHIQQQQLQYGYHNHQNYN 71
>AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory receptor
candidate 40 protein.
Length = 373
Score = 18.6 bits (36), Expect = 7.8
Identities = 5/26 (19%), Positives = 12/26 (46%)
Frame = -1
Query: 133 CVHSYNYS*HKRCQRTSVSLRSYWRR 56
C NY +C+ S + ++++
Sbjct: 160 CFSMLNYVYSSKCENNSTGVEHFFKK 185
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 18.6 bits (36), Expect = 7.8
Identities = 8/25 (32%), Positives = 13/25 (52%)
Frame = -1
Query: 190 GEFRRNQHTRHRRLSAVYLCVHSYN 116
G+F N H + ++L Y +YN
Sbjct: 47 GDFFGNHHIQQQQLQYGYHNHQNYN 71
>AF243042-1|AAF68438.1| 126|Tribolium castaneum mutant
transcription factor TcDfd1 protein.
Length = 126
Score = 18.6 bits (36), Expect = 7.8
Identities = 8/25 (32%), Positives = 13/25 (52%)
Frame = -1
Query: 190 GEFRRNQHTRHRRLSAVYLCVHSYN 116
G+F N H + ++L Y +YN
Sbjct: 47 GDFFGNHHIQQQQLQYGYHNHQNYN 71
>AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B
protein.
Length = 351
Score = 18.6 bits (36), Expect = 7.8
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -3
Query: 170 AHSPSPTFRSVSLCSQ 123
A +P P+ SVS C Q
Sbjct: 125 AAAPGPSDPSVSSCHQ 140
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,110
Number of Sequences: 336
Number of extensions: 1005
Number of successful extensions: 18
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 45
effective length of database: 107,465
effective search space used: 2794090
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
- SilkBase 1999-2023 -