Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_F24
(217 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC22H10.09 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 25 1.4
SPAC22G7.06c |ura1||carbamoyl-phosphate synthase |Schizosaccharo... 25 1.8
SPAC4A8.09c |cwf21||complexed with Cdc5 protein Cwf21 |Schizosac... 25 1.8
SPAC821.13c ||SPAC955.01c|P-type ATPase |Schizosaccharomyces pom... 25 1.8
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 23 4.1
SPCC569.07 |||aromatic aminotransferase |Schizosaccharomyces pom... 23 4.1
SPBC106.01 |mph1|SPBC1271.16c, SPBC243.01|dual specificity prote... 23 4.1
SPBP23A10.13 |orc4|orp4|origin recognition complex subunit Orc4|... 23 7.2
SPAC4F8.03 ||SPAC644.01c|SBDS family ribosome maturation protein... 23 7.2
SPAC16.02c |srp2||mRNA export factor Srp2|Schizosaccharomyces po... 23 7.2
SPCC1259.11c |gyp2||GTPase activating protein Gyp2 |Schizosaccha... 23 7.2
SPAC2E1P5.05 |||U3 snoRNP-associated protein Rrp9 |Schizosacchar... 23 7.2
SPBC2G5.06c |hmt2|cad1|sulfide-quinone oxidoreductase|Schizosacc... 22 9.6
SPBC1709.18 |tif452|SPBC409.01|translation initiation factor eIF... 22 9.6
SPAC24C9.14 |otu1|mug141|ubiquitin-specific protease |Schizosacc... 22 9.6
SPBC36B7.09 |gcn2|ppk28, ppk28, SPBP18G5.01|eIF2 alpha kinase Gc... 22 9.6
>SPAC22H10.09 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 646
Score = 25.0 bits (52), Expect = 1.4
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -3
Query: 167 HSPSPTFR-SVSLCSQL*LFMTQTLPKDFGFSPFLLAQ 57
H P F + +L QL +F + PKD GFS L +Q
Sbjct: 99 HPFYPVFEVNSNLYYQLLMFTNYSNPKDNGFSKLLFSQ 136
>SPAC22G7.06c |ura1||carbamoyl-phosphate synthase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2244
Score = 24.6 bits (51), Expect = 1.8
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -3
Query: 182 PSEPAHSPSPTFRSVS 135
P EP SPSP F SV+
Sbjct: 35 PKEPTCSPSPAFYSVN 50
>SPAC4A8.09c |cwf21||complexed with Cdc5 protein Cwf21
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 293
Score = 24.6 bits (51), Expect = 1.8
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -1
Query: 127 HSYNYS*HKRCQRTSVSLRSYWRRSVRTSRWYSRED 20
H +YS + +R S SY RRS R Y+R D
Sbjct: 218 HYDSYSSYDELERRRSSNESYSRRSELPRRDYNRHD 253
>SPAC821.13c ||SPAC955.01c|P-type ATPase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1562
Score = 24.6 bits (51), Expect = 1.8
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = -1
Query: 64 WRRSVRTSRWYSREDTLSYVP 2
W++ V WY LS+VP
Sbjct: 597 WQKKVERKLWYLTNSKLSFVP 617
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 23.4 bits (48), Expect = 4.1
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +1
Query: 106 VMNNYNCEHKDTLRKVGDG 162
+ +NY C+ D L GDG
Sbjct: 45 IQHNYTCQTGDPLGPTGDG 63
>SPCC569.07 |||aromatic aminotransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 470
Score = 23.4 bits (48), Expect = 4.1
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +1
Query: 40 VKFEPICASKNGEKPKSFGSV 102
VKF PI +NG P+SF V
Sbjct: 170 VKFIPIDMDENGMLPESFEKV 190
>SPBC106.01 |mph1|SPBC1271.16c, SPBC243.01|dual specificity protein
kinase Mph1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 678
Score = 23.4 bits (48), Expect = 4.1
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = +2
Query: 95 AAFVS*IIITVNTKIHCGKSAMASVLVPTEFASLNLNY 208
AA V+ + +N + CG++ +A++L+ +NLN+
Sbjct: 381 AAEVNDTLGQLNMVMECGETDLANLLMKNMKKPINLNF 418
>SPBP23A10.13 |orc4|orp4|origin recognition complex subunit
Orc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 972
Score = 22.6 bits (46), Expect = 7.2
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +2
Query: 8 VRKRVFTTVPT*SSNRSAPVRTERNRSPL 94
+RK V T S PV+ +R R PL
Sbjct: 290 IRKEVVVTDQPLFSTADVPVKRKRGRPPL 318
>SPAC4F8.03 ||SPAC644.01c|SBDS family ribosome maturation
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 246
Score = 22.6 bits (46), Expect = 7.2
Identities = 7/27 (25%), Positives = 18/27 (66%)
Frame = -1
Query: 199 IKRGEFRRNQHTRHRRLSAVYLCVHSY 119
+++G+F+ + RH ++S+ Y + S+
Sbjct: 88 LQKGDFQVGEKERHHQMSSTYRDIVSH 114
>SPAC16.02c |srp2||mRNA export factor Srp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 365
Score = 22.6 bits (46), Expect = 7.2
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -1
Query: 193 RGEFRRNQHTRHRR 152
RGE+RRN +RR
Sbjct: 223 RGEYRRNNRDEYRR 236
>SPCC1259.11c |gyp2||GTPase activating protein Gyp2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 720
Score = 22.6 bits (46), Expect = 7.2
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = +1
Query: 76 EKPKSFGSVCVMNNYNCEHKDTLR 147
E KSFG+ + ++ C H D +
Sbjct: 45 EYSKSFGNAYICTSFLCFHSDDFK 68
>SPAC2E1P5.05 |||U3 snoRNP-associated protein Rrp9
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 524
Score = 22.6 bits (46), Expect = 7.2
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = -1
Query: 145 AVYLCVHSYNYS*HKRCQRTSVSLRSYWRRSVRTSRW 35
+VY C++S + S + +++ V + + R R RW
Sbjct: 457 SVYGCINSLSLSLQGKGKQSEVRVFAACGRETRVGRW 493
>SPBC2G5.06c |hmt2|cad1|sulfide-quinone
oxidoreductase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 459
Score = 22.2 bits (45), Expect = 9.6
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -2
Query: 105 TNAAKGLRFLSVLTGADRFELH 40
++ AK R L+ L AD+F+LH
Sbjct: 94 SSVAKTRRELASLVPADKFKLH 115
Score = 22.2 bits (45), Expect = 9.6
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = -1
Query: 67 YWRRSVRTSRWY 32
YW +VR +WY
Sbjct: 435 YWNFAVRNGKWY 446
>SPBC1709.18 |tif452|SPBC409.01|translation initiation factor eIF4E
4F complex subunit |Schizosaccharomyces pombe|chr
2|||Manual
Length = 243
Score = 22.2 bits (45), Expect = 9.6
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +1
Query: 85 KSFGSVCVMNNYNCEHKDTLRKVG 156
K F + V NC KD L K+G
Sbjct: 184 KGFYRIAVWTR-NCNDKDVLEKIG 206
>SPAC24C9.14 |otu1|mug141|ubiquitin-specific protease
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 329
Score = 22.2 bits (45), Expect = 9.6
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -3
Query: 104 QTLPKDFGFSPFLLAQIGSNFTL 36
+ L K GFSP+ L +I +N L
Sbjct: 149 RALSKPLGFSPYELREIVANQVL 171
>SPBC36B7.09 |gcn2|ppk28, ppk28, SPBP18G5.01|eIF2 alpha kinase Gcn2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1576
Score = 22.2 bits (45), Expect = 9.6
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -3
Query: 167 HSPSPTFRSV 138
HSPSPT +SV
Sbjct: 1314 HSPSPTLKSV 1323
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 909,089
Number of Sequences: 5004
Number of extensions: 15853
Number of successful extensions: 45
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 2,362,478
effective HSP length: 51
effective length of database: 2,107,274
effective search space used: 42145480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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