Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_F24
(217 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g79640.1 68414.m09286 protein kinase family protein contains ... 28 0.97
At5g37480.1 68418.m04514 expressed protein 27 1.7
At2g01950.1 68415.m00130 leucine-rich repeat transmembrane prote... 26 3.0
At5g47455.6 68418.m05857 expressed protein 26 3.9
At5g47455.5 68418.m05855 expressed protein 26 3.9
At5g47455.4 68418.m05860 expressed protein 26 3.9
At5g47455.3 68418.m05859 expressed protein 26 3.9
At5g47455.2 68418.m05858 expressed protein 26 3.9
At5g47455.1 68418.m05856 expressed protein 26 3.9
At4g36080.1 68417.m05136 FAT domain-containing protein / phospha... 25 5.2
At4g12270.1 68417.m01944 copper amine oxidase family protein con... 25 5.2
At1g66550.1 68414.m07561 WRKY family transcription factor simila... 25 5.2
At1g07840.2 68414.m00851 leucine zipper factor-related similar t... 25 5.2
At1g07840.1 68414.m00850 leucine zipper factor-related similar t... 25 5.2
At1g05310.1 68414.m00538 pectinesterase family protein contains ... 25 5.2
At3g51640.1 68416.m05663 expressed protein 25 6.8
At3g22330.1 68416.m02820 DEAD box RNA helicase, putative similar... 25 6.8
At3g21480.1 68416.m02710 transcription activation domain-interac... 25 6.8
At5g17880.1 68418.m02097 disease resistance protein (TIR-NBS-LRR... 25 9.0
At5g17660.1 68418.m02070 expressed protein contains Pfam profile... 25 9.0
At3g66652.1 68416.m00776 fip1 motif-containing protein contains ... 25 9.0
>At1g79640.1 68414.m09286 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 694
Score = 27.9 bits (59), Expect = 0.97
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +1
Query: 7 RKKACLHDCTNVKFEPICASKNGEKPKSFGSVCVMNN 117
R+K LHD T++++ ICA + +K K+ + M+N
Sbjct: 658 REKELLHDITDLQWRLICAEEELQKYKTEHAQVSMSN 694
>At5g37480.1 68418.m04514 expressed protein
Length = 156
Score = 27.1 bits (57), Expect = 1.7
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +1
Query: 61 ASKNGEKPKSFGSVCVMNNYNCEHKDTLRKVGDGECAGSD 180
A+K GE+P SFG + NY K L+ V D + G++
Sbjct: 51 AAKEGEEPISFGDNASLLNYGLGWK--LKTVVDADLPGTE 88
>At2g01950.1 68415.m00130 leucine-rich repeat transmembrane protein
kinase, putative similar to brassinosteroid insensitive
protein
Length = 1143
Score = 26.2 bits (55), Expect = 3.0
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Frame = +1
Query: 22 LHDCTNVKFEPICASK-NGEKPKSFGSVCVMNNYNCEHKDTL----RKVGDGECAGSDGI 186
L +CTN+K + + +G+ PKSFG + ++ + + H ++GD C +
Sbjct: 224 LINCTNLKSLNLSYNNFDGQIPKSFGELKLLQSLDLSHNRLTGWIPPEIGD-TCRSLQNL 282
Query: 187 RLS 195
RLS
Sbjct: 283 RLS 285
>At5g47455.6 68418.m05857 expressed protein
Length = 100
Score = 25.8 bits (54), Expect = 3.9
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = -3
Query: 188 RIPSEPAHSPSPTFRSVSLC 129
RIPS+PA SP P F S S C
Sbjct: 42 RIPSKPAASPLPRF-SFSRC 60
>At5g47455.5 68418.m05855 expressed protein
Length = 108
Score = 25.8 bits (54), Expect = 3.9
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = -3
Query: 188 RIPSEPAHSPSPTFRSVSLC 129
RIPS+PA SP P F S S C
Sbjct: 42 RIPSKPAASPLPRF-SFSRC 60
>At5g47455.4 68418.m05860 expressed protein
Length = 116
Score = 25.8 bits (54), Expect = 3.9
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = -3
Query: 188 RIPSEPAHSPSPTFRSVSLC 129
RIPS+PA SP P F S S C
Sbjct: 42 RIPSKPAASPLPRF-SFSRC 60
>At5g47455.3 68418.m05859 expressed protein
Length = 106
Score = 25.8 bits (54), Expect = 3.9
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = -3
Query: 188 RIPSEPAHSPSPTFRSVSLC 129
RIPS+PA SP P F S S C
Sbjct: 42 RIPSKPAASPLPRF-SFSRC 60
>At5g47455.2 68418.m05858 expressed protein
Length = 104
Score = 25.8 bits (54), Expect = 3.9
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = -3
Query: 188 RIPSEPAHSPSPTFRSVSLC 129
RIPS+PA SP P F S S C
Sbjct: 42 RIPSKPAASPLPRF-SFSRC 60
>At5g47455.1 68418.m05856 expressed protein
Length = 100
Score = 25.8 bits (54), Expect = 3.9
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = -3
Query: 188 RIPSEPAHSPSPTFRSVSLC 129
RIPS+PA SP P F S S C
Sbjct: 42 RIPSKPAASPLPRF-SFSRC 60
>At4g36080.1 68417.m05136 FAT domain-containing protein /
phosphatidylinositol 3- and 4-kinase family protein
contains Pfam profiles PF00454: Phosphatidylinositol 3-
and 4-kinase, PF02259: FAT domain, PF02260: FATC domain
Length = 3839
Score = 25.4 bits (53), Expect = 5.2
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 138 YTAESRRWRVCWFRRNSPLLI*TTKP 215
+TAE + C+FR +S +L+ TKP
Sbjct: 39 HTAEYLNFLKCYFRASSVILLQITKP 64
>At4g12270.1 68417.m01944 copper amine oxidase family protein
contains similarity to copper amine oxidase [Cicer
arietinum] gi|3819099|emb|CAA08855; contains Pfam
domains PF02728: Copper amine oxidase, N3 domain and
PF02727: Copper amine oxidase, N2 domain
Length = 460
Score = 25.4 bits (53), Expect = 5.2
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +1
Query: 1 AARKKACLHDCTNVKFEPICASKN 72
A A L DCT P CAS+N
Sbjct: 30 APSSTAKLFDCTKSSSSPFCASRN 53
>At1g66550.1 68414.m07561 WRKY family transcription factor similar
to DNA-binding protein 3 [Nicotiana tabacum] GI:7406995
Length = 254
Score = 25.4 bits (53), Expect = 5.2
Identities = 11/47 (23%), Positives = 23/47 (48%)
Frame = -1
Query: 181 RRNQHTRHRRLSAVYLCVHSYNYS*HKRCQRTSVSLRSYWRRSVRTS 41
R ++ +HRR V + +YN+ C + R Y +++++ S
Sbjct: 78 RSSKQVQHRRKLCVAEGLVNYNHDSRTMCPNDGFTWRKYGQKTIKAS 124
>At1g07840.2 68414.m00851 leucine zipper factor-related similar to
charged amino acid rich leucine zipper factor-1
(GI:12061569) {Mus musculus}
Length = 312
Score = 25.4 bits (53), Expect = 5.2
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +1
Query: 22 LHDCTNVKFEPI-CASKNGEKPKSFG 96
LH+ T ++ I K+GEKP+SFG
Sbjct: 272 LHELTENFYDDIKFLDKDGEKPRSFG 297
>At1g07840.1 68414.m00850 leucine zipper factor-related similar to
charged amino acid rich leucine zipper factor-1
(GI:12061569) {Mus musculus}
Length = 312
Score = 25.4 bits (53), Expect = 5.2
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +1
Query: 22 LHDCTNVKFEPI-CASKNGEKPKSFG 96
LH+ T ++ I K+GEKP+SFG
Sbjct: 272 LHELTENFYDDIKFLDKDGEKPRSFG 297
>At1g05310.1 68414.m00538 pectinesterase family protein contains
Pfam profile: PF01095 pectinesterase
Length = 393
Score = 25.4 bits (53), Expect = 5.2
Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 2/49 (4%)
Frame = -3
Query: 167 HSPSPTFRSVSLCSQL*LFMTQTLPKDFGFSPFLLAQIGS--NFTLVQS 27
H PS T R VS+C F P D + +L NFT VQS
Sbjct: 61 HKPSDTKRKVSICDD---FPKNIPPLDTDTTSYLCVDKNGCCNFTTVQS 106
>At3g51640.1 68416.m05663 expressed protein
Length = 826
Score = 25.0 bits (52), Expect = 6.8
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = -3
Query: 179 SEPAHSPSPTFRSVSLCSQL*LFMTQTLPKDFGF-SPFLLAQIGSNFT 39
S P+ +P P +S + SQ+ T P FG SPF + S T
Sbjct: 511 SRPSTNPQPNVQSSQVPSQVSSIRTFDNPISFGLPSPFTIPVYSSGST 558
>At3g22330.1 68416.m02820 DEAD box RNA helicase, putative similar to
RNA helicases GI:3775995, GI:3775987 from [Arabidopsis
thaliana]; contains Pfam profiles PF00270: DEAD/DEAH box
helicase, PF00271: Helicase conserved C-terminal domain
Length = 616
Score = 25.0 bits (52), Expect = 6.8
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +1
Query: 145 RKVGDGECAGSDGIRLS 195
R+VGD E G DG+ +S
Sbjct: 91 RRVGDSESVGGDGLAIS 107
>At3g21480.1 68416.m02710 transcription activation
domain-interacting protein-related contains weak
similarity to Pax transcription activation domain
interacting protein PTIP (GI:4336734) [Mus musculus]
Length = 1045
Score = 25.0 bits (52), Expect = 6.8
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +1
Query: 49 EPICASKNGEKPKSFGSVCVM 111
EPI +K+ K + GS+CV+
Sbjct: 800 EPISETKSTRKRRDLGSICVL 820
>At5g17880.1 68418.m02097 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1197
Score = 24.6 bits (51), Expect = 9.0
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -1
Query: 187 EFRRNQHTRHRRLSAVYLCV 128
EF H H RLS + LCV
Sbjct: 985 EFELPPHWNHNRLSGIALCV 1004
>At5g17660.1 68418.m02070 expressed protein contains Pfam profile
PF02390: Putative methyltransferase
Length = 312
Score = 24.6 bits (51), Expect = 9.0
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2
Query: 149 KSAMASVLVPTEFASLNLNYKTS 217
K ++ LV E+A LNLN+K S
Sbjct: 66 KDLRSNELVELEYAELNLNHKIS 88
>At3g66652.1 68416.m00776 fip1 motif-containing protein contains
Pfam profile PF05182: Fip1 motif
Length = 980
Score = 24.6 bits (51), Expect = 9.0
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -1
Query: 199 IKRGEFRRNQHTRHRR 152
IKRGE H+RHRR
Sbjct: 397 IKRGEDSGTMHSRHRR 412
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,751,841
Number of Sequences: 28952
Number of extensions: 84032
Number of successful extensions: 271
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 265
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 271
length of database: 12,070,560
effective HSP length: 51
effective length of database: 10,594,008
effective search space used: 211880160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -