Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_F23
(610 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC2C4.16c |rps801|rps8-1|40S ribosomal protein S8|Schizosaccha... 173 1e-44
SPAC521.05 |rps802|rps8-2|40S ribosomal protein S8|Schizosacchar... 173 1e-44
SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase ki... 29 0.40
SPBC12C2.09c |||Haemolysin-III family protein|Schizosaccharomyce... 27 1.6
SPAC890.03 |ppk16|mug92|serine/threonine protein kinase Ppk16 |S... 27 2.1
SPAP27G11.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 27 2.8
SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10 |Schizosac... 27 2.8
SPAC13C5.03 |tht1||nuclear membrane protein involved in karyogam... 26 3.7
SPAC1782.01 ||SPAPYUG7.07|proteasome component|Schizosaccharomyc... 25 6.5
SPBC27B12.04c |||conserved eukaryotic protein|Schizosaccharomyce... 25 6.5
SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C |Schizosaccharom... 25 8.7
>SPAC2C4.16c |rps801|rps8-1|40S ribosomal protein
S8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 200
Score = 173 bits (422), Expect = 1e-44
Identities = 82/125 (65%), Positives = 98/125 (78%)
Frame = +3
Query: 3 DHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRGGNTKYRALRLDTGNF 182
D HKR ATG KRA RKKRK+ELGR +NT++GP+RIH VR RGGN K+RALRLD+GNF
Sbjct: 6 DSRHKRSATGAKRAQYRKKRKFELGRQPSNTRIGPKRIHEVRVRGGNKKFRALRLDSGNF 65
Query: 183 AWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYLLPLGRKK 362
+WGSE ++KTRII V Y+ SNNELVRT TL K+AIV +DA PFR WYE+HY + +G K
Sbjct: 66 SWGSEGVSKKTRIIQVAYHPSNNELVRTNTLTKSAIVQIDAAPFRVWYETHYGILMG-SK 124
Query: 363 GAKLT 377
G K T
Sbjct: 125 GKKAT 129
Score = 75.8 bits (178), Expect = 5e-15
Identities = 37/64 (57%), Positives = 45/64 (70%)
Frame = +1
Query: 415 KRQRRKYLSRQRLSKVEGGLEEQFHTGRLLACVASRPGQCGRADGYIWEGKELEFYLRKI 594
K +RK+ +R SKV+ LE QF GRL A V+SRPGQ GR DGYI EG+EL FYLR++
Sbjct: 137 KHVQRKHSARLGDSKVDSALETQFAAGRLYAVVSSRPGQSGRCDGYILEGEELHFYLRRM 196
Query: 595 KSKK 606
KK
Sbjct: 197 APKK 200
>SPAC521.05 |rps802|rps8-2|40S ribosomal protein
S8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 200
Score = 173 bits (422), Expect = 1e-44
Identities = 82/125 (65%), Positives = 98/125 (78%)
Frame = +3
Query: 3 DHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRGGNTKYRALRLDTGNF 182
D HKR ATG KRA RKKRK+ELGR +NT++GP+RIH VR RGGN K+RALRLD+GNF
Sbjct: 6 DSRHKRSATGAKRAQYRKKRKFELGRQPSNTRIGPKRIHEVRVRGGNKKFRALRLDSGNF 65
Query: 183 AWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYLLPLGRKK 362
+WGSE ++KTRII V Y+ SNNELVRT TL K+AIV +DA PFR WYE+HY + +G K
Sbjct: 66 SWGSEGVSKKTRIIQVAYHPSNNELVRTNTLTKSAIVQIDAAPFRVWYETHYGILMG-SK 124
Query: 363 GAKLT 377
G K T
Sbjct: 125 GKKAT 129
Score = 75.8 bits (178), Expect = 5e-15
Identities = 37/64 (57%), Positives = 45/64 (70%)
Frame = +1
Query: 415 KRQRRKYLSRQRLSKVEGGLEEQFHTGRLLACVASRPGQCGRADGYIWEGKELEFYLRKI 594
K +RK+ +R SKV+ LE QF GRL A V+SRPGQ GR DGYI EG+EL FYLR++
Sbjct: 137 KHVQRKHSARLGDSKVDSALETQFAAGRLYAVVSSRPGQSGRCDGYILEGEELHFYLRRM 196
Query: 595 KSKK 606
KK
Sbjct: 197 APKK 200
>SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase kinase
Win1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1436
Score = 29.5 bits (63), Expect = 0.40
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = +3
Query: 69 ELGRPAANTKLGPQRIHLVRSRGGNTKYRALRLDTGNFAWGSECSTRKTRI 221
EL +N + Q+ L+ S T YRA+ LDTG+ E + K RI
Sbjct: 1108 ELASSKSNITIRWQQGGLIGSGSFGTVYRAVNLDTGDLMAVKEVALHKPRI 1158
>SPBC12C2.09c |||Haemolysin-III family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 324
Score = 27.5 bits (58), Expect = 1.6
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -2
Query: 90 WQPGDLTHTSSSYEWAHVC 34
W PG SS++W HVC
Sbjct: 278 WSPGKYDVFGSSHQWFHVC 296
>SPAC890.03 |ppk16|mug92|serine/threonine protein kinase Ppk16
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 672
Score = 27.1 bits (57), Expect = 2.1
Identities = 25/83 (30%), Positives = 39/83 (46%)
Frame = +3
Query: 81 PAANTKLGPQRIHLVRSRGGNTKYRALRLDTGNFAWGSECSTRKTRIIDVVYNASNNELV 260
P NT + PQ RSR T R+L +G + S ++ +TR V +AS+N L+
Sbjct: 530 PLQNTVISPQPTR--RSR---TPIRSL---SGRSSVASSRNSSRTRSYSNVSSASSNSLI 581
Query: 261 RTKTLVKNAIVVVDATPFRQWYE 329
+ ++ V TPF +E
Sbjct: 582 SIISSKPSSSTVQRQTPFHSPFE 604
>SPAP27G11.14c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 689
Score = 26.6 bits (56), Expect = 2.8
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -3
Query: 293 DNSILYQGFGTHQFIVRGIINNI 225
+NS+ +Q F +H FI R +IN I
Sbjct: 541 ENSLYHQSFSSHWFISRLLINPI 563
>SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 848
Score = 26.6 bits (56), Expect = 2.8
Identities = 23/86 (26%), Positives = 32/86 (37%), Gaps = 3/86 (3%)
Frame = +3
Query: 3 DHWHKRRATGGKRAPIRKKRKY---ELGRPAANTKLGPQRIHLVRSRGGNTKYRALRLDT 173
D W +A G +PIR+ ++Y +L P K H R K R + +
Sbjct: 758 DEWKASKAFGANDSPIRENKRYKHNKLQTPKPADKF-RDNYHKQNKRNREAKERGIGIKV 816
Query: 174 GNFAWGSECSTRKTRIIDVVYNASNN 251
N S RK R + A NN
Sbjct: 817 -NSELKSAVEIRKARELKEKRLAKNN 841
>SPAC13C5.03 |tht1||nuclear membrane protein involved in karyogamy
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 543
Score = 26.2 bits (55), Expect = 3.7
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -3
Query: 329 FIPLPERCGIHHDNSILYQ 273
F+P PE C I+H+ I Q
Sbjct: 477 FLPAPEECNIYHNEHIQVQ 495
>SPAC1782.01 ||SPAPYUG7.07|proteasome component|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1679
Score = 25.4 bits (53), Expect = 6.5
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -3
Query: 386 LSLSELGTFLPSEW 345
LSL+E GTFL EW
Sbjct: 1554 LSLNECGTFLQKEW 1567
>SPBC27B12.04c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 817
Score = 25.4 bits (53), Expect = 6.5
Identities = 15/61 (24%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +3
Query: 186 WGSEC--STRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYLLPLGRK 359
WGS+ +K + +V+ +++ + +T L AT F + +S+Y +PL R+
Sbjct: 250 WGSQSYLQEKKAGLAEVLNISTSQQKPKTTALDYEVFRHEMATKFSSFADSYYPVPLDRE 309
Query: 360 K 362
+
Sbjct: 310 Q 310
>SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1016
Score = 25.0 bits (52), Expect = 8.7
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +3
Query: 336 YLLPLGRKKGAKLTE 380
Y+LPLGRK K TE
Sbjct: 492 YILPLGRKTARKCTE 506
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,748,735
Number of Sequences: 5004
Number of extensions: 58957
Number of successful extensions: 147
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 147
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 268287866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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