Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_F23
(610 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0510 - 16659486-16659564,16659772-16659947,16660464-166607... 182 2e-46
02_03_0270 + 17135464-17135467,17135583-17135655,17136253-171365... 182 2e-46
06_03_1165 - 28106604-28106915 32 0.41
03_04_0037 + 16694760-16695227,16695563-16695642,16695735-166958... 30 1.2
07_01_0467 - 3524598-3524837,3524939-3525466,3526242-3526892,352... 30 1.6
05_01_0573 - 5083030-5083151,5084639-5084738,5084790-5084829,508... 29 2.2
04_03_0182 - 12349072-12349149,12349459-12349656,12349746-123497... 29 2.2
11_06_0744 - 26850761-26850771,26850794-26850861,26851464-26851861 29 2.9
03_01_0161 + 1307206-1307769,1307979-1308101,1308182-1308286,130... 29 2.9
06_03_0609 + 22710442-22713502,22713596-22713948 29 3.8
04_04_0466 + 25433678-25434007,25434118-25434176,25434345-254344... 28 5.0
06_01_0913 - 7042230-7043332,7043420-7043621 28 6.7
05_07_0165 + 28107093-28108457 28 6.7
03_01_0438 + 3399203-3399297,3399389-3399480,3399638-3399750,340... 28 6.7
01_06_0213 + 27580635-27581105,27581206-27581298,27581376-275815... 28 6.7
09_03_0103 - 12383585-12384700 27 8.8
03_02_0922 - 12417328-12417816,12417929-12418399,12418568-124186... 27 8.8
02_05_0753 + 31510269-31510473,31510989-31511035,31511123-315111... 27 8.8
01_01_1134 + 8994315-8995892 27 8.8
>04_03_0510 -
16659486-16659564,16659772-16659947,16660464-16660797,
16661564-16661636,16661780-16661783
Length = 221
Score = 182 bits (443), Expect = 2e-46
Identities = 88/131 (67%), Positives = 103/131 (78%), Gaps = 1/131 (0%)
Frame = +3
Query: 3 DHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQR-IHLVRSRGGNTKYRALRLDTGN 179
D HKRRATGGK+ RKKRKYELGR ANTKL + + VR RGGN K+RALRLDTGN
Sbjct: 6 DSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNLKWRALRLDTGN 65
Query: 180 FAWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYLLPLGRK 359
++WGSE TRKTRI+DVVYNASNNELVRT+TLVK+AIV VDA PF+QWY +HY + +GRK
Sbjct: 66 YSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGVDIGRK 125
Query: 360 KGAKLTEAEEA 392
K A + + A
Sbjct: 126 KKAPAAKKDAA 136
Score = 90.6 bits (215), Expect = 8e-19
Identities = 39/61 (63%), Positives = 50/61 (81%)
Frame = +1
Query: 427 RKYLSRQRLSKVEGGLEEQFHTGRLLACVASRPGQCGRADGYIWEGKELEFYLRKIKSKK 606
RK RQ+ ++ +EEQF +GRLLAC++SRPGQCGRADGYI EGKELEFY++K++ KK
Sbjct: 156 RKLEKRQQTRTLDSHIEEQFGSGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQRKK 215
Query: 607 G 609
G
Sbjct: 216 G 216
>02_03_0270 +
17135464-17135467,17135583-17135655,17136253-17136583,
17136916-17136969,17137219-17137394,17137607-17137685
Length = 238
Score = 182 bits (443), Expect = 2e-46
Identities = 90/134 (67%), Positives = 105/134 (78%), Gaps = 3/134 (2%)
Frame = +3
Query: 3 DHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQR-IHLVRSRGGNTKYRALRLDTGN 179
D HKRRATGGK+ RKKRKYELGR ANTKL + + VR RGGN K+RALRLDTGN
Sbjct: 6 DSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALRLDTGN 65
Query: 180 FAWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYLLPLGRK 359
++WGSE TRKTRI+DVVYNASNNELVRT+TLVK+AIV VDA PF+QWY +HY + +GRK
Sbjct: 66 YSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGVDIGRK 125
Query: 360 KGAKLT--EAEEAI 395
K A +AE A+
Sbjct: 126 KKAPAAKKDAEHAL 139
Score = 89.4 bits (212), Expect = 2e-18
Identities = 39/61 (63%), Positives = 50/61 (81%)
Frame = +1
Query: 427 RKYLSRQRLSKVEGGLEEQFHTGRLLACVASRPGQCGRADGYIWEGKELEFYLRKIKSKK 606
RK RQ+ ++ +EEQF +GRLLAC++SRPGQCGRADGYI EGKELEFY++K++ KK
Sbjct: 173 RKLEKRQQGRTLDAHIEEQFGSGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQRKK 232
Query: 607 G 609
G
Sbjct: 233 G 233
>06_03_1165 - 28106604-28106915
Length = 103
Score = 31.9 bits (69), Expect = 0.41
Identities = 20/61 (32%), Positives = 30/61 (49%)
Frame = +3
Query: 357 KKGAKLTEAEEAIINKKRSQKTAKKVPEQAAPVQGRGWSGGAIPHWTAVSMCGESARSVR 536
K A L + A+ + + AK+V +A PV +GGA + + CG +ARS R
Sbjct: 26 KDQAGLCRWDYALRSLYQRAAAAKQVTGRAVPVSLSSQTGGAAASSSPAAACGRAARSKR 85
Query: 537 S 539
S
Sbjct: 86 S 86
>03_04_0037 +
16694760-16695227,16695563-16695642,16695735-16695828,
16695973-16696071,16696650-16696742,16696822-16696941,
16697422-16697525,16697734-16697806,16698023-16698085
Length = 397
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/62 (29%), Positives = 29/62 (46%)
Frame = +1
Query: 424 RRKYLSRQRLSKVEGGLEEQFHTGRLLACVASRPGQCGRADGYIWEGKELEFYLRKIKSK 603
RR+ R +S + + F+ +LA AS P +C R + + G + LRK S
Sbjct: 84 RRRRRLRSIISLLHLPILRPFYLRYILAAAASGPCRCRRKESLVGMGNYISRVLRKSSSD 143
Query: 604 KG 609
+G
Sbjct: 144 RG 145
>07_01_0467 -
3524598-3524837,3524939-3525466,3526242-3526892,
3527015-3527500,3527580-3527792,3527885-3528174,
3528276-3528418,3528633-3528855,3528983-3529160,
3529598-3529867
Length = 1073
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 5/50 (10%)
Frame = +3
Query: 60 RKYELGRPAANTKLGPQRIHLVRSR----GGNTKYRALRLDTGN-FAWGS 194
R+ +LG P+ +T+ P+R+ +++R K+ A DTG F WGS
Sbjct: 271 REGQLGYPSVDTQPTPRRVSSLKARIISVAAANKHSAAVADTGEVFTWGS 320
>05_01_0573 -
5083030-5083151,5084639-5084738,5084790-5084829,
5085122-5085567
Length = 235
Score = 29.5 bits (63), Expect = 2.2
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 459 GRGWSGGAIPHWTAVS 506
G GW GG+ HW++VS
Sbjct: 65 GNGWQGGSTDHWSSVS 80
>04_03_0182 -
12349072-12349149,12349459-12349656,12349746-12349750,
12349928-12350041,12350129-12350240,12350363-12350377
Length = 173
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = -1
Query: 211 LRVEHSDPHAKFPVSRRRARYLVLPPRDLTKWMRWGPSLV 92
LRV H H + +R R + + P ++ K RWG ++
Sbjct: 16 LRVMHFSGHGDWTTNRDRPTFTLYPLQECYKLWRWGTQMI 55
>11_06_0744 - 26850761-26850771,26850794-26850861,26851464-26851861
Length = 158
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +3
Query: 15 KRRATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRGGNTK 149
KRR GG+RA R+K + E GR A + R RGG +
Sbjct: 45 KRRRGGGRRAAGRRKEEEEAGRRKAGEEARRGAGKRKRRRGGGRR 89
Score = 29.1 bits (62), Expect = 2.9
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +3
Query: 15 KRRATGGKRAPIRKKRKYELGRPAANTKLGPQRI-HLVRSRGGNTKYRALR 164
KRR GG+RA R+K + E GR A + + R RGG + R R
Sbjct: 81 KRRRGGGRRAAGRRKEEEEAGRRKAGEETRRRGAGRRKRRRGGRRRRRRRR 131
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +3
Query: 15 KRRATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRGGNTK 149
+RR GG+RA R+K + E GR A + R RGG +
Sbjct: 9 RRRRGGGRRAAGRRKEEEEAGRRKAGEEARRGAGKRKRRRGGGRR 53
>03_01_0161 +
1307206-1307769,1307979-1308101,1308182-1308286,
1308688-1308867,1308988-1309050,1309151-1309345,
1309704-1309805,1309885-1309947,1310045-1310113,
1310215-1310270,1310587-1310755
Length = 562
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = +3
Query: 114 IHLVRSRGGNTKYRALRLDTGNFAWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIV 293
+H + + GG T R +R C +++ ++V++ + NELV T +N I+
Sbjct: 376 LHGLLASGGGTADRCIRFWNTTTNMHLNCVDTGSQVCNLVWSKNVNELVSTHGYSQNQII 435
Query: 294 V 296
V
Sbjct: 436 V 436
>06_03_0609 + 22710442-22713502,22713596-22713948
Length = 1137
Score = 28.7 bits (61), Expect = 3.8
Identities = 19/67 (28%), Positives = 31/67 (46%)
Frame = -2
Query: 603 LGFDLPKVELQLFTFPNVTIGATALTGPTRHTC*QPSSVELLLQTTLYLGQALPAQVLSS 424
L D+P T V +G ALTG SS++ L+ + L LP +L++
Sbjct: 208 LSGDIPPSLGSSLTLTYVNLGKNALTGGIPKPMLNSSSLQQLILNSNSLSGELPKALLNT 267
Query: 423 LSFDCVF 403
LS + ++
Sbjct: 268 LSLNGIY 274
>04_04_0466 +
25433678-25434007,25434118-25434176,25434345-25434426,
25435024-25435122,25435750-25435831,25436759-25436823,
25437241-25438308,25438369-25438446,25438550-25438596,
25438734-25438779,25438871-25438950,25439050-25439166,
25439842-25439923,25440156-25440281,25440415-25440489,
25440743-25440868,25441542-25441646
Length = 888
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = +3
Query: 417 KTAKKVPEQAAPVQGRGWSGGAIPHWTAVSMCGESARSVRSRRWLHL 557
+ A P AA V GRG S + + A + AR R RRW L
Sbjct: 12 RMAPPPPLAAASVSGRGRSPSSASSYRAAARWWPGARRGRRRRWAGL 58
>06_01_0913 - 7042230-7043332,7043420-7043621
Length = 434
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -1
Query: 175 PVSRRRARYLVLPPRDLTKWMRWGPSLVLAAGRPNSY 65
P +R+ R+ P +T + W P L +AAGRP ++
Sbjct: 180 PGTRKFWRW-AFPTHGVTVSVYWAPFLAMAAGRPENF 215
>05_07_0165 + 28107093-28108457
Length = 454
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -1
Query: 490 CGIAPPDHPLPWTGAACS 437
C +PPD+ LPW AA S
Sbjct: 248 CTYSPPDYGLPWADAAVS 265
>03_01_0438 +
3399203-3399297,3399389-3399480,3399638-3399750,
3400345-3400610,3400793-3400864,3401023-3401098,
3401241-3401339,3401432-3401586,3401679-3401783,
3401880-3401966,3402459-3402543,3402626-3402734,
3403468-3403544,3403635-3403715,3404137-3404328,
3404415-3404528,3404650-3404742,3404864-3404990,
3405075-3405151,3405455-3405502,3405588-3405657,
3405737-3405810,3405895-3406005,3406222-3406300,
3406936-3408320
Length = 1293
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 384 EEAIINKKRSQKTAKKVPEQAAPVQGRGWSGG 479
+EAII K+S+K + VP + + W GG
Sbjct: 648 KEAIIKFKKSRKHDQNVPFSVVVISDKDWLGG 679
>01_06_0213 + 27580635-27581105,27581206-27581298,27581376-27581540,
27581640-27581862,27582329-27582429,27582666-27582713,
27583086-27583172,27583745-27583879,27583985-27584140,
27585336-27585545,27585641-27586351,27586429-27586974,
27587872-27588495,27588595-27588699,27590460-27590711,
27590939-27591766
Length = 1584
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +3
Query: 363 GAKLTEAEEAIINKKRSQKTAKKVPEQAAPVQGRGWSGGAIPH 491
G++L ++E+ N++ Q ++ EQ P RG+SGG+ PH
Sbjct: 1470 GSQLDQSED---NEENGQPMDEEYDEQV-PDYSRGYSGGSRPH 1508
>09_03_0103 - 12383585-12384700
Length = 371
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/59 (25%), Positives = 27/59 (45%)
Frame = -3
Query: 398 YDGFLSLSELGTFLPSEWQQVVAFIPLPERCGIHHDNSILYQGFGTHQFIVRGIINNIN 222
+D F E+ T W+Q+ +F P G+H + ++ Y ++I IN +N
Sbjct: 173 FDSFNVCCEIFTIGDKSWRQIGSFHGAPTDRGVHVNGAVYY--LTKFRYIASSRINCLN 229
>03_02_0922 -
12417328-12417816,12417929-12418399,12418568-12418663,
12418746-12418927,12419027-12419486
Length = 565
Score = 27.5 bits (58), Expect = 8.8
Identities = 17/59 (28%), Positives = 23/59 (38%), Gaps = 5/59 (8%)
Frame = +3
Query: 351 GRKKGAKLTEAEEAIINKKRSQKTAKKVPEQAAPVQGRGWSGGAIPH-----WTAVSMC 512
G G K AE + R +K + V+GR W A+P W+A S C
Sbjct: 61 GDHPGPKPRPAERGLFVLDRGEKVVESEGGHVRVVRGRPWPPAAVPDPWQRGWSAASGC 119
>02_05_0753 +
31510269-31510473,31510989-31511035,31511123-31511177,
31511282-31511354,31511441-31511528,31511658-31511740,
31511841-31511970,31512183-31512261,31512409-31512473,
31512581-31512682
Length = 308
Score = 27.5 bits (58), Expect = 8.8
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +1
Query: 316 GSGMKATTCCHSEGRKVPSSLRLRKPS*TKNAVKRQRRKYLSRQRLSKVEGGLE 477
GS + + EGR SLR+ +P+ K AV + K ++ R K GG E
Sbjct: 18 GSDRRRSALYGGEGRARIGSLRVAEPAVAKAAVWARGSKPVAPLRAKKSSGGHE 71
>01_01_1134 + 8994315-8995892
Length = 525
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +3
Query: 174 GNFAWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFR 317
G F+ C+ RK +DV + RT +N+ VV D+T F+
Sbjct: 146 GLFSRDCPCAGRKAVTVDVASEPRSPATPRTHARFENSHVVADSTIFK 193
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,896,591
Number of Sequences: 37544
Number of extensions: 469176
Number of successful extensions: 1391
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1340
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1389
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1454766756
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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