Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_F23
         (610 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50471-1|AAA93474.1|  135|Anopheles gambiae protein ( Anopheles ...   115   1e-27
AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsiv...    27   0.63 
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    26   1.1  
AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative acetyltr...    23   7.7  

>U50471-1|AAA93474.1|  135|Anopheles gambiae protein ( Anopheles
           gambiae putativeribosomal protein S8 mRNA, complete cds.
           ).
          Length = 135

 Score =  115 bits (276), Expect = 1e-27
 Identities = 52/75 (69%), Positives = 65/75 (86%)
 Frame = +3

Query: 207 RKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYLLPLGRKKGAKLTEAE 386
           RK RIIDVVYNASNNEL+RTKTLVKNAI+V+DA+PFRQWYESHYLLPLG+K+  +L   E
Sbjct: 3   RKARIIDVVYNASNNELIRTKTLVKNAIIVIDASPFRQWYESHYLLPLGKKR--ELKAGE 60

Query: 387 EAIINKKRSQKTAKK 431
           E +++KKR++   +K
Sbjct: 61  EDVLSKKRTKSNLRK 75



 Score =   99 bits (238), Expect = 6e-23
 Identities = 44/69 (63%), Positives = 56/69 (81%)
 Frame = +1

Query: 400 TKNAVKRQRRKYLSRQRLSKVEGGLEEQFHTGRLLACVASRPGQCGRADGYIWEGKELEF 579
           +K   K   RKY+ RQ+ +K++  +EEQF+ GRLLAC++SRPGQ GRADGYI EGKELEF
Sbjct: 65  SKKRTKSNLRKYVKRQKNAKIDPAVEEQFNAGRLLACISSRPGQVGRADGYILEGKELEF 124

Query: 580 YLRKIKSKK 606
           YL+KIK+KK
Sbjct: 125 YLKKIKNKK 133


>AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsive
           protein 2 protein.
          Length = 439

 Score = 26.6 bits (56), Expect = 0.63
 Identities = 13/27 (48%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
 Frame = -2

Query: 84  PGDLTHTSSSYEWAHVCR--P*PSSYA 10
           PG  T T   Y WA VC   P PS+ A
Sbjct: 325 PGPQTQTEGFYSWAEVCAMLPNPSNTA 351


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +1

Query: 298 WMPHLSGSGMKATTCCHSEGRKVPS 372
           W+PH+    +KAT   H+  R +P+
Sbjct: 819 WVPHVKEITLKATRIVHAVNRLMPN 843


>AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative
           acetyltransferase protein.
          Length = 471

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +1

Query: 247 TMNWCVPKPW*RMLLSWWMPHLSGSG 324
           T N    K W R +LS W P+  G G
Sbjct: 379 TRNTVSKKHWMRKVLSDWEPYPMGYG 404


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 714,770
Number of Sequences: 2352
Number of extensions: 15953
Number of successful extensions: 25
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 59291487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)