Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_F23
(610 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X67247-1|CAA47670.1| 208|Homo sapiens ribosomal protein S8 prot... 260 3e-69
BC070875-1|AAH70875.1| 208|Homo sapiens ribosomal protein S8 pr... 260 3e-69
AL592166-7|CAI13003.1| 208|Homo sapiens ribosomal protein S8 pr... 260 3e-69
AB062401-1|BAB93488.1| 208|Homo sapiens ribosomal protein S8 pr... 260 3e-69
AL592166-8|CAI13002.1| 188|Homo sapiens ribosomal protein S8 pr... 201 2e-51
BC005678-1|AAH05678.1| 80|Homo sapiens Similar to ribosomal pr... 99 6e-21
>X67247-1|CAA47670.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 260 bits (637), Expect = 3e-69
Identities = 118/147 (80%), Positives = 129/147 (87%)
Frame = +3
Query: 3 DHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRGGNTKYRALRLDTGNF 182
D+WHKRR TGGKR P KKRKYELGRPAANTK+GP+RIH VR RGGN KYRALRLD GNF
Sbjct: 6 DNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNF 65
Query: 183 AWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYLLPLGRKK 362
+WGSEC TRKTRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRKK
Sbjct: 66 SWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKK 125
Query: 363 GAKLTEAEEAIINKKRSQKTAKKVPEQ 443
GAKLT EE I+NKKRS+K KK E+
Sbjct: 126 GAKLTPEEEEILNKKRSKKIQKKYDER 152
Score = 99 bits (238), Expect = 6e-21
Identities = 44/69 (63%), Positives = 56/69 (81%)
Frame = +1
Query: 403 KNAVKRQRRKYLSRQRLSKVEGGLEEQFHTGRLLACVASRPGQCGRADGYIWEGKELEFY 582
K K+ ++KY R++ +K+ LEEQF G+LLAC+ASRPGQCGRADGY+ EGKELEFY
Sbjct: 139 KKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFY 198
Query: 583 LRKIKSKKG 609
LRKIK++KG
Sbjct: 199 LRKIKARKG 207
>BC070875-1|AAH70875.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 260 bits (637), Expect = 3e-69
Identities = 118/147 (80%), Positives = 129/147 (87%)
Frame = +3
Query: 3 DHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRGGNTKYRALRLDTGNF 182
D+WHKRR TGGKR P KKRKYELGRPAANTK+GP+RIH VR RGGN KYRALRLD GNF
Sbjct: 6 DNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNF 65
Query: 183 AWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYLLPLGRKK 362
+WGSEC TRKTRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRKK
Sbjct: 66 SWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKK 125
Query: 363 GAKLTEAEEAIINKKRSQKTAKKVPEQ 443
GAKLT EE I+NKKRS+K KK E+
Sbjct: 126 GAKLTPEEEEILNKKRSKKIQKKYDER 152
Score = 99 bits (238), Expect = 6e-21
Identities = 44/69 (63%), Positives = 56/69 (81%)
Frame = +1
Query: 403 KNAVKRQRRKYLSRQRLSKVEGGLEEQFHTGRLLACVASRPGQCGRADGYIWEGKELEFY 582
K K+ ++KY R++ +K+ LEEQF G+LLAC+ASRPGQCGRADGY+ EGKELEFY
Sbjct: 139 KKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFY 198
Query: 583 LRKIKSKKG 609
LRKIK++KG
Sbjct: 199 LRKIKARKG 207
>AL592166-7|CAI13003.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 260 bits (637), Expect = 3e-69
Identities = 118/147 (80%), Positives = 129/147 (87%)
Frame = +3
Query: 3 DHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRGGNTKYRALRLDTGNF 182
D+WHKRR TGGKR P KKRKYELGRPAANTK+GP+RIH VR RGGN KYRALRLD GNF
Sbjct: 6 DNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNF 65
Query: 183 AWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYLLPLGRKK 362
+WGSEC TRKTRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRKK
Sbjct: 66 SWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKK 125
Query: 363 GAKLTEAEEAIINKKRSQKTAKKVPEQ 443
GAKLT EE I+NKKRS+K KK E+
Sbjct: 126 GAKLTPEEEEILNKKRSKKIQKKYDER 152
Score = 99 bits (238), Expect = 6e-21
Identities = 44/69 (63%), Positives = 56/69 (81%)
Frame = +1
Query: 403 KNAVKRQRRKYLSRQRLSKVEGGLEEQFHTGRLLACVASRPGQCGRADGYIWEGKELEFY 582
K K+ ++KY R++ +K+ LEEQF G+LLAC+ASRPGQCGRADGY+ EGKELEFY
Sbjct: 139 KKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFY 198
Query: 583 LRKIKSKKG 609
LRKIK++KG
Sbjct: 199 LRKIKARKG 207
>AB062401-1|BAB93488.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 260 bits (637), Expect = 3e-69
Identities = 118/147 (80%), Positives = 129/147 (87%)
Frame = +3
Query: 3 DHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRGGNTKYRALRLDTGNF 182
D+WHKRR TGGKR P KKRKYELGRPAANTK+GP+RIH VR RGGN KYRALRLD GNF
Sbjct: 6 DNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNF 65
Query: 183 AWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYLLPLGRKK 362
+WGSEC TRKTRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRKK
Sbjct: 66 SWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKK 125
Query: 363 GAKLTEAEEAIINKKRSQKTAKKVPEQ 443
GAKLT EE I+NKKRS+K KK E+
Sbjct: 126 GAKLTPEEEEILNKKRSKKIQKKYDER 152
Score = 99 bits (238), Expect = 6e-21
Identities = 44/69 (63%), Positives = 56/69 (81%)
Frame = +1
Query: 403 KNAVKRQRRKYLSRQRLSKVEGGLEEQFHTGRLLACVASRPGQCGRADGYIWEGKELEFY 582
K K+ ++KY R++ +K+ LEEQF G+LLAC+ASRPGQCGRADGY+ EGKELEFY
Sbjct: 139 KKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFY 198
Query: 583 LRKIKSKKG 609
LRKIK++KG
Sbjct: 199 LRKIKARKG 207
>AL592166-8|CAI13002.1| 188|Homo sapiens ribosomal protein S8
protein.
Length = 188
Score = 201 bits (490), Expect = 2e-51
Identities = 102/147 (69%), Positives = 112/147 (76%)
Frame = +3
Query: 3 DHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRGGNTKYRALRLDTGNF 182
D+WHKRR TGGKR P KKRKYELGRPAANTK+GP+RIH VR RGG
Sbjct: 6 DNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGG-------------- 51
Query: 183 AWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYLLPLGRKK 362
C TRKTRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRKK
Sbjct: 52 -----C-TRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKK 105
Query: 363 GAKLTEAEEAIINKKRSQKTAKKVPEQ 443
GAKLT EE I+NKKRS+K KK E+
Sbjct: 106 GAKLTPEEEEILNKKRSKKIQKKYDER 132
Score = 99 bits (238), Expect = 6e-21
Identities = 44/69 (63%), Positives = 56/69 (81%)
Frame = +1
Query: 403 KNAVKRQRRKYLSRQRLSKVEGGLEEQFHTGRLLACVASRPGQCGRADGYIWEGKELEFY 582
K K+ ++KY R++ +K+ LEEQF G+LLAC+ASRPGQCGRADGY+ EGKELEFY
Sbjct: 119 KKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFY 178
Query: 583 LRKIKSKKG 609
LRKIK++KG
Sbjct: 179 LRKIKARKG 187
>BC005678-1|AAH05678.1| 80|Homo sapiens Similar to ribosomal
protein S8 protein.
Length = 80
Score = 99 bits (238), Expect = 6e-21
Identities = 44/69 (63%), Positives = 56/69 (81%)
Frame = +1
Query: 403 KNAVKRQRRKYLSRQRLSKVEGGLEEQFHTGRLLACVASRPGQCGRADGYIWEGKELEFY 582
K K+ ++KY R++ +K+ LEEQF G+LLAC+ASRPGQCGRADGY+ EGKELEFY
Sbjct: 11 KKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFY 70
Query: 583 LRKIKSKKG 609
LRKIK++KG
Sbjct: 71 LRKIKARKG 79
Score = 30.3 bits (65), Expect = 5.5
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +3
Query: 372 LTEAEEAIINKKRSQKTAKKVPEQ 443
LT EE I+NKKRS+K KK E+
Sbjct: 1 LTPEEEEILNKKRSKKIQKKYDER 24
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,623,125
Number of Sequences: 237096
Number of extensions: 2520265
Number of successful extensions: 5133
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4938
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5132
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6466646650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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