Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_F23
(610 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40799-7|AAA81485.1| 208|Caenorhabditis elegans Ribosomal prote... 221 3e-58
U66260-1|AAB07021.1| 1540|Caenorhabditis elegans multidrug resis... 33 0.21
U41554-8|ABA03118.1| 1534|Caenorhabditis elegans Multidrug resis... 33 0.21
U41554-7|AAM69107.1| 1534|Caenorhabditis elegans Multidrug resis... 33 0.21
U41554-6|AAL06032.1| 1534|Caenorhabditis elegans Multidrug resis... 33 0.21
U41554-5|AAD31550.2| 1528|Caenorhabditis elegans Multidrug resis... 33 0.21
AB199793-1|BAD88409.1| 1534|Caenorhabditis elegans multidrug res... 33 0.21
Z68227-9|CAA92514.1| 64|Caenorhabditis elegans Hypothetical pr... 31 0.85
Z81102-6|CAB03207.2| 571|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z81102-4|CAB03204.2| 639|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z69659-7|CAA93488.2| 571|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z69659-6|CAA93486.2| 639|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z79757-3|CAC42307.1| 585|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z79757-2|CAB02129.2| 587|Caenorhabditis elegans Hypothetical pr... 28 6.0
AL117205-7|CAB55160.1| 293|Caenorhabditis elegans Hypothetical ... 28 6.0
AF020788-1|AAC47809.1| 587|Caenorhabditis elegans SEL-10 protein. 28 6.0
AF016674-1|AAB66132.1| 160|Caenorhabditis elegans Hypothetical ... 28 6.0
>U40799-7|AAA81485.1| 208|Caenorhabditis elegans Ribosomal protein,
small subunitprotein 8 protein.
Length = 208
Score = 221 bits (540), Expect = 3e-58
Identities = 101/147 (68%), Positives = 118/147 (80%)
Frame = +3
Query: 3 DHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRGGNTKYRALRLDTGNF 182
D WHKR TG + KKRK+ELGRPAANTK+G R+ LVR+RGGN KYRALRLD+GNF
Sbjct: 6 DSWHKRYKTGATQPVPHKKRKFELGRPAANTKIGAHRVRLVRTRGGNEKYRALRLDSGNF 65
Query: 183 AWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYLLPLGRKK 362
+W SE +TRKTRI+D +YNA+NNELVRTKTLVK AI+ VDA PFRQWYE+HY LPL RKK
Sbjct: 66 SWASEQTTRKTRIVDTMYNATNNELVRTKTLVKGAIISVDAAPFRQWYEAHYALPLARKK 125
Query: 363 GAKLTEAEEAIINKKRSQKTAKKVPEQ 443
AKL+E + AI+NKKRS T KK E+
Sbjct: 126 NAKLSEEDNAILNKKRSHHTMKKYTER 152
Score = 81.0 bits (191), Expect = 6e-16
Identities = 37/60 (61%), Positives = 49/60 (81%)
Frame = +1
Query: 427 RKYLSRQRLSKVEGGLEEQFHTGRLLACVASRPGQCGRADGYIWEGKELEFYLRKIKSKK 606
+KY RQ+ + V+ L EQF+TGRLLA ++S PGQ G+A+GYI EGKEL+FYLRKI++KK
Sbjct: 147 KKYTERQKTAAVDALLIEQFNTGRLLARISSSPGQVGQANGYILEGKELDFYLRKIRAKK 206
>U66260-1|AAB07021.1| 1540|Caenorhabditis elegans multidrug
resistance related protein1 protein.
Length = 1540
Score = 32.7 bits (71), Expect = 0.21
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +3
Query: 156 ALRLDTGNFAWGSECSTRKTRIIDVVYNASNNELV 260
A+++D G+FAWGS+ RK + D+ +N +LV
Sbjct: 613 AIKMDGGSFAWGSKEEDRK--LHDITFNIKRGQLV 645
>U41554-8|ABA03118.1| 1534|Caenorhabditis elegans Multidrug
resistance protein familyprotein 1, isoform e protein.
Length = 1534
Score = 32.7 bits (71), Expect = 0.21
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +3
Query: 156 ALRLDTGNFAWGSECSTRKTRIIDVVYNASNNELV 260
A+++D G+FAWGS+ RK + D+ +N +LV
Sbjct: 613 AIKMDGGSFAWGSKEEDRK--LHDITFNIKRGQLV 645
>U41554-7|AAM69107.1| 1534|Caenorhabditis elegans Multidrug
resistance protein familyprotein 1, isoform c protein.
Length = 1534
Score = 32.7 bits (71), Expect = 0.21
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +3
Query: 156 ALRLDTGNFAWGSECSTRKTRIIDVVYNASNNELV 260
A+++D G+FAWGS+ RK + D+ +N +LV
Sbjct: 613 AIKMDGGSFAWGSKEEDRK--LHDITFNIKRGQLV 645
>U41554-6|AAL06032.1| 1534|Caenorhabditis elegans Multidrug
resistance protein familyprotein 1, isoform b protein.
Length = 1534
Score = 32.7 bits (71), Expect = 0.21
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +3
Query: 156 ALRLDTGNFAWGSECSTRKTRIIDVVYNASNNELV 260
A+++D G+FAWGS+ RK + D+ +N +LV
Sbjct: 613 AIKMDGGSFAWGSKEEDRK--LHDITFNIKRGQLV 645
>U41554-5|AAD31550.2| 1528|Caenorhabditis elegans Multidrug
resistance protein familyprotein 1, isoform a protein.
Length = 1528
Score = 32.7 bits (71), Expect = 0.21
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +3
Query: 156 ALRLDTGNFAWGSECSTRKTRIIDVVYNASNNELV 260
A+++D G+FAWGS+ RK + D+ +N +LV
Sbjct: 613 AIKMDGGSFAWGSKEEDRK--LHDITFNIKRGQLV 645
>AB199793-1|BAD88409.1| 1534|Caenorhabditis elegans multidrug
resistance-associatedprotein protein.
Length = 1534
Score = 32.7 bits (71), Expect = 0.21
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +3
Query: 156 ALRLDTGNFAWGSECSTRKTRIIDVVYNASNNELV 260
A+++D G+FAWGS+ RK + D+ +N +LV
Sbjct: 613 AIKMDGGSFAWGSKEEDRK--LHDITFNIKRGQLV 645
>Z68227-9|CAA92514.1| 64|Caenorhabditis elegans Hypothetical
protein F49C12.11 protein.
Length = 64
Score = 30.7 bits (66), Expect = 0.85
Identities = 21/46 (45%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
Frame = +3
Query: 360 KGAKLTE---AEEAIINKKRSQKTAKKVPEQAAPVQGRG-WSGGAI 485
K AK TE +EE + KK+ Q+ AKK+ E AA RG GG I
Sbjct: 13 KAAKKTEKDLSEEDVEFKKKQQEEAKKIKEMAAKAGQRGPLLGGGI 58
>Z81102-6|CAB03207.2| 571|Caenorhabditis elegans Hypothetical
protein F07C6.4c protein.
Length = 571
Score = 28.7 bits (61), Expect = 3.4
Identities = 16/47 (34%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Frame = +1
Query: 358 RKVPSSLRLRKPS*TKNAVKRQRRKYL--SRQRLSKVEGGLEEQFHT 492
R V ++ RL T +V+++R+K L +R RL+++E GL++ H+
Sbjct: 143 RIVAAASRLATDKNTNKSVRKKRQKDLQAARLRLNRLEQGLQQMRHS 189
>Z81102-4|CAB03204.2| 639|Caenorhabditis elegans Hypothetical
protein F07C6.4b protein.
Length = 639
Score = 28.7 bits (61), Expect = 3.4
Identities = 16/47 (34%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Frame = +1
Query: 358 RKVPSSLRLRKPS*TKNAVKRQRRKYL--SRQRLSKVEGGLEEQFHT 492
R V ++ RL T +V+++R+K L +R RL+++E GL++ H+
Sbjct: 211 RIVAAASRLATDKNTNKSVRKKRQKDLQAARLRLNRLEQGLQQMRHS 257
>Z69659-7|CAA93488.2| 571|Caenorhabditis elegans Hypothetical
protein F07C6.4c protein.
Length = 571
Score = 28.7 bits (61), Expect = 3.4
Identities = 16/47 (34%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Frame = +1
Query: 358 RKVPSSLRLRKPS*TKNAVKRQRRKYL--SRQRLSKVEGGLEEQFHT 492
R V ++ RL T +V+++R+K L +R RL+++E GL++ H+
Sbjct: 143 RIVAAASRLATDKNTNKSVRKKRQKDLQAARLRLNRLEQGLQQMRHS 189
>Z69659-6|CAA93486.2| 639|Caenorhabditis elegans Hypothetical
protein F07C6.4b protein.
Length = 639
Score = 28.7 bits (61), Expect = 3.4
Identities = 16/47 (34%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Frame = +1
Query: 358 RKVPSSLRLRKPS*TKNAVKRQRRKYL--SRQRLSKVEGGLEEQFHT 492
R V ++ RL T +V+++R+K L +R RL+++E GL++ H+
Sbjct: 211 RIVAAASRLATDKNTNKSVRKKRQKDLQAARLRLNRLEQGLQQMRHS 257
>Z79757-3|CAC42307.1| 585|Caenorhabditis elegans Hypothetical
protein F55B12.3b protein.
Length = 585
Score = 27.9 bits (59), Expect = 6.0
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -1
Query: 571 ALYLPKCNHRRDRTDRADSPHMLTAVQCGIAPPDHPLP 458
+L + + H D TDR TA+ G+ PDH P
Sbjct: 164 SLGVEEFKHHPDPTDRVTGAWQGTAIAAGVTIPDHIQP 201
>Z79757-2|CAB02129.2| 587|Caenorhabditis elegans Hypothetical
protein F55B12.3a protein.
Length = 587
Score = 27.9 bits (59), Expect = 6.0
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -1
Query: 571 ALYLPKCNHRRDRTDRADSPHMLTAVQCGIAPPDHPLP 458
+L + + H D TDR TA+ G+ PDH P
Sbjct: 166 SLGVEEFKHHPDPTDRVTGAWQGTAIAAGVTIPDHIQP 203
>AL117205-7|CAB55160.1| 293|Caenorhabditis elegans Hypothetical
protein Y116A8A.8 protein.
Length = 293
Score = 27.9 bits (59), Expect = 6.0
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +3
Query: 198 CSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQ 320
CS + I ++A+NN ++ KT N I TPF Q
Sbjct: 51 CSIQNLMYIQKRFSANNNMIIALKTDTINEITESVCTPFEQ 91
>AF020788-1|AAC47809.1| 587|Caenorhabditis elegans SEL-10 protein.
Length = 587
Score = 27.9 bits (59), Expect = 6.0
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -1
Query: 571 ALYLPKCNHRRDRTDRADSPHMLTAVQCGIAPPDHPLP 458
+L + + H D TDR TA+ G+ PDH P
Sbjct: 166 SLGVEEFKHHPDPTDRVTGAWQGTAIAAGVTIPDHIQP 203
>AF016674-1|AAB66132.1| 160|Caenorhabditis elegans Hypothetical
protein C03H5.4 protein.
Length = 160
Score = 27.9 bits (59), Expect = 6.0
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = -3
Query: 389 FLSLSELGTFLPSEWQQVVAFIPLPERCGIHHDNSILYQGFGTH 258
FL LG LP V I RC HHD + +Y G+G +
Sbjct: 2 FLFPLVLGFLLPETLNTFVLEIQFMTRCMTHHD-AWIYNGYGCY 44
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,478,372
Number of Sequences: 27780
Number of extensions: 345157
Number of successful extensions: 945
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 907
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 945
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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