Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_F23
         (610 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF080430-1|AAC28863.2|  208|Apis mellifera ribosomal protein S8 ...   276   1e-76
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     25   0.44 
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    24   1.3  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    24   1.3  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   5.4  
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    22   5.4  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    22   5.4  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       21   7.1  
AF134816-1|AAD40232.1|   50|Apis mellifera unknown protein.            21   7.1  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    21   9.4  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   9.4  

>AF080430-1|AAC28863.2|  208|Apis mellifera ribosomal protein S8
           protein.
          Length = 208

 Score =  276 bits (676), Expect = 1e-76
 Identities = 124/143 (86%), Positives = 134/143 (93%)
 Frame = +3

Query: 3   DHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRGGNTKYRALRLDTGNF 182
           DHWHKRRATGGKR PIRKKRK+ELGRPAANTKLGPQRIH VR+RGGN KYRALRLDTGNF
Sbjct: 6   DHWHKRRATGGKRKPIRKKRKFELGRPAANTKLGPQRIHTVRTRGGNKKYRALRLDTGNF 65

Query: 183 AWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYLLPLGRKK 362
           +WGSEC+TRKTRIIDVVYNASNNELVRTKTLVKNAIV +DATPFRQWYE HY+LPLGRK+
Sbjct: 66  SWGSECTTRKTRIIDVVYNASNNELVRTKTLVKNAIVTIDATPFRQWYEGHYVLPLGRKR 125

Query: 363 GAKLTEAEEAIINKKRSQKTAKK 431
           GAKLTEAEE ++NKKRS+K   K
Sbjct: 126 GAKLTEAEEEVLNKKRSKKAEAK 148



 Score =  104 bits (249), Expect = 8e-25
 Identities = 47/68 (69%), Positives = 55/68 (80%)
 Frame = +1

Query: 403 KNAVKRQRRKYLSRQRLSKVEGGLEEQFHTGRLLACVASRPGQCGRADGYIWEGKELEFY 582
           K   K+   KY +RQR +KVE  LEEQF TGR+LAC++SRPGQCGR DGYI EGKELEFY
Sbjct: 139 KKRSKKAEAKYKARQRFAKVEPALEEQFATGRVLACISSRPGQCGREDGYILEGKELEFY 198

Query: 583 LRKIKSKK 606
           +R+IKSKK
Sbjct: 199 MRRIKSKK 206


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 25.4 bits (53), Expect = 0.44
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -1

Query: 511 HMLTAVQCGIAPPDHPLPWTGAACSGTFF 425
           H    V   + PP+ P+P   +AC G+ +
Sbjct: 169 HQFQTVVASMDPPEPPVPTVTSACVGSAY 197


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 11/51 (21%), Positives = 21/51 (41%)
 Frame = +3

Query: 396  INKKRSQKTAKKVPEQAAPVQGRGWSGGAIPHWTAVSMCGESARSVRSRRW 548
            + + +S K A +VP    P +   + G  +  W   +    +A    +R W
Sbjct: 1295 VGEGQSSKVAAQVPTNRVPARITSFGGHVVRPWRGSATLACNAVGDPTREW 1345


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 11/51 (21%), Positives = 21/51 (41%)
 Frame = +3

Query: 396  INKKRSQKTAKKVPEQAAPVQGRGWSGGAIPHWTAVSMCGESARSVRSRRW 548
            + + +S K A +VP    P +   + G  +  W   +    +A    +R W
Sbjct: 1291 VGEGQSSKVAAQVPTNRVPARITSFGGHVVRPWRGSATLACNAVGDPTREW 1341


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -3

Query: 239 IINNINNTSLAG 204
           +INN NNTS+ G
Sbjct: 488 VINNRNNTSMKG 499


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = +1

Query: 217 VLLMLFIMPLTMNWCVPKPW*RMLLSWWMPHL 312
           VL + F  P T N     PW R +   WMP L
Sbjct: 333 VLNVHFRSPSTHNM---SPWVRQVFLNWMPRL 361


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -2

Query: 219 YESCGLNIQIPMRSFQYQD 163
           YE CGL  + PM SFQ  D
Sbjct: 653 YE-CGLRFEDPMISFQPGD 670


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 6/20 (30%), Positives = 11/20 (55%)
 Frame = +1

Query: 217 VLLMLFIMPLTMNWCVPKPW 276
           +L+   +MPL + W +   W
Sbjct: 85  LLVTFLMMPLEIGWAITVSW 104


>AF134816-1|AAD40232.1|   50|Apis mellifera unknown protein.
          Length = 50

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -1

Query: 544 RRDRTDRADSPHMLTAVQCGIAPPDH 467
           +R + +   +  M+ A+ C I P DH
Sbjct: 9   KRRKKNLNQNQMMIWALDCSIKPKDH 34


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 10/38 (26%), Positives = 20/38 (52%)
 Frame = +3

Query: 207 RKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQ 320
           RK  + +VVY    N + +    V + I ++ A+P ++
Sbjct: 358 RKRPMHNVVYRPGENPVTQRLPAVLSRIGIILASPLKR 395


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 547 GYIWEGKELEFYLRK 591
           G +W   E+EFY R+
Sbjct: 570 GAVWTVDEVEFYKRR 584


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,104
Number of Sequences: 438
Number of extensions: 4406
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17971191
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)