Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_F22
(571 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1052 - 27217792-27217846,27218025-27218114,27218191-272182... 215 2e-56
02_01_0533 + 3868230-3868564,3869040-3869098,3869187-3869225,386... 214 4e-56
08_01_0179 + 1519141-1519144,1519278-1519301,1519417-1519517,151... 159 1e-39
02_04_0507 + 23546911-23546953,23547011-23547111,23547695-235478... 157 8e-39
04_04_0306 + 24280773-24280776,24280906-24280929,24281023-242811... 134 5e-32
04_04_0120 + 22911863-22911904,22912002-22912112,22912212-229127... 132 2e-31
03_01_0208 + 1642041-1642118,1642200-1642310,1643157-1643318,164... 114 4e-26
02_04_0371 + 22434710-22435102,22435428-22435624,22435707-224358... 30 1.5
08_02_1628 + 28363476-28363517,28363624-28363791,28363863-283639... 29 2.0
06_03_0975 - 26471438-26472109,26472189-26472284,26472372-264724... 29 2.0
06_01_0580 + 4148969-4149101,4149394-4149546,4149682-4150095,415... 29 3.4
01_06_0708 + 31363851-31364063,31364314-31364439,31364646-31365755 29 3.4
07_03_1666 + 28482262-28482385,28482475-28482992 28 4.6
12_01_0935 - 9277421-9277584,9277908-9278111,9280742-9280982,928... 28 6.0
05_04_0288 + 19839597-19839821,19841882-19842107,19842494-198425... 28 6.0
04_04_1057 - 30451759-30452523,30452627-30452701,30453180-304532... 28 6.0
04_04_0678 + 27207340-27207447,27207555-27207668,27209111-272093... 28 6.0
12_01_0937 - 9289999-9290046,9290123-9290458 27 8.0
02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,162... 27 8.0
>06_03_1052 -
27217792-27217846,27218025-27218114,27218191-27218274,
27218526-27218668,27218748-27218845,27218959-27219019,
27219184-27219330,27219428-27219527,27219701-27219813,
27220302-27220402,27220614-27220652,27220739-27220797,
27221027-27221088,27221411-27221506
Length = 415
Score = 215 bits (525), Expect = 2e-56
Identities = 103/149 (69%), Positives = 124/149 (83%), Gaps = 2/149 (1%)
Frame = +2
Query: 131 SKIGINGFGRIGRLVLRASIDKG-ADVVAINDPFIGLDYMVYLFQYDSTHGRFKGTVEAV 307
+K+GINGFGRIGRLVLR + ++ +VVA+NDPFI YM Y+F+YDSTHG FKGT++ V
Sbjct: 80 TKVGINGFGRIGRLVLRIATNRDDIEVVAVNDPFIDAKYMAYMFKYDSTHGPFKGTIKVV 139
Query: 308 D-GHLVVNGKKIAVFSERDPHAIPWGQAGAEYVVESTGVFTTTDKASAHLVGGAKKVIIS 484
D L +NGKKI+V S+RDP IPWG GAEYVVES+GVFTTT+KASAHL GGA+KV+IS
Sbjct: 140 DESTLEINGKKISVTSKRDPSDIPWGNFGAEYVVESSGVFTTTEKASAHLKGGARKVVIS 199
Query: 485 APSADAPMFVVGVNLEAYDPSYKVISNAS 571
APSADAPMFVVGVN + Y+PS V+SNAS
Sbjct: 200 APSADAPMFVVGVNEKNYNPSMNVVSNAS 228
>02_01_0533 +
3868230-3868564,3869040-3869098,3869187-3869225,
3869629-3869729,3870288-3870400,3870976-3871075,
3871170-3871316,3871442-3871502,3871616-3871713,
3871786-3871928,3872221-3872304,3872389-3872478,
3872574-3872628
Length = 474
Score = 214 bits (523), Expect = 4e-56
Identities = 101/149 (67%), Positives = 122/149 (81%), Gaps = 2/149 (1%)
Frame = +2
Query: 131 SKIGINGFGRIGRLVLRASIDKG-ADVVAINDPFIGLDYMVYLFQYDSTHGRFKGTVEAV 307
+K+GINGFGRIGRLVLR + + +VVA+NDPFI YM Y+F+YDSTHG FKG+++ V
Sbjct: 139 TKVGINGFGRIGRLVLRIATSRDDIEVVAVNDPFIDAKYMAYMFKYDSTHGPFKGSIKVV 198
Query: 308 DGH-LVVNGKKIAVFSERDPHAIPWGQAGAEYVVESTGVFTTTDKASAHLVGGAKKVIIS 484
D L +NGKK+ + S+RDP IPWG GAEYVVES+GVFTTT+KASAHL GGAKKV+IS
Sbjct: 199 DDSTLEINGKKVTITSKRDPADIPWGNFGAEYVVESSGVFTTTEKASAHLKGGAKKVVIS 258
Query: 485 APSADAPMFVVGVNLEAYDPSYKVISNAS 571
APSADAPMFVVGVN ++YDP V+SNAS
Sbjct: 259 APSADAPMFVVGVNEKSYDPKMNVVSNAS 287
>08_01_0179 +
1519141-1519144,1519278-1519301,1519417-1519517,
1519805-1519920,1519944-1520112,1520713-1520859,
1520943-1521003,1521086-1521183,1521608-1521750,
1521980-1522063,1522191-1522280,1522375-1522420
Length = 360
Score = 159 bits (387), Expect = 1e-39
Identities = 87/172 (50%), Positives = 113/172 (65%), Gaps = 26/172 (15%)
Frame = +2
Query: 134 KIGINGFGRIGRLVLRASID-KGADVVAINDPFIGLDYMVYLFQYDSTHGRFKGT-VEAV 307
KIGINGFGRIGRLV R ++ + ++VA+NDPFI DYM Y+F+YD+ HG++K + ++
Sbjct: 5 KIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIK 64
Query: 308 DGHLVVNGKK-IAVFS-----------------------ERDPHAIPWGQAGAEYVVEST 415
D ++ G+K + VF ER+P IPW +AGAEYVVEST
Sbjct: 65 DSKTLLLGEKPVTVFGISLDESNLFMVASVELMFDPVQFERNPDEIPWAEAGAEYVVEST 124
Query: 416 GVFTTTDKASAHLVGGAKKVIISAPSADAPMFVVGVNLEAYDPSYKVISNAS 571
GVFT +KA+AHL GGAKKV+ISAPS DAPMFV GVN + Y ++SNAS
Sbjct: 125 GVFTDKEKAAAHLKGGAKKVVISAPSKDAPMFVCGVNEDKYTSDIDIVSNAS 176
>02_04_0507 +
23546911-23546953,23547011-23547111,23547695-23547810,
23547897-23547996,23548027-23548215,23548303-23548363,
23548469-23548566,23548943-23549085,23549228-23549311,
23549423-23549512,23549599-23549644
Length = 356
Score = 157 bits (380), Expect = 8e-39
Identities = 84/158 (53%), Positives = 107/158 (67%), Gaps = 17/158 (10%)
Frame = +2
Query: 149 GFGRIGRLVLRASID-KGADVVAINDPFIGLDYMVYLFQYDSTHGRFKG-TVEAVDGHLV 322
GFGRIGRLV R ++ + ++VA+NDPFI +YM Y+F+YD+ HG++K V+ D +
Sbjct: 15 GFGRIGRLVARVALQSEDVELVAVNDPFITTEYMTYMFKYDTVHGQWKHHEVKVKDSKTL 74
Query: 323 VNG-KKIAVFSERDPHAIPWGQAGAEYVVESTGVFTTTDKASAHL--------------V 457
+ G K++AVF R+P IPW AGAEYVVESTGVFT DKA+AHL
Sbjct: 75 IFGTKEVAVFGCRNPEEIPWAAAGAEYVVESTGVFTDKDKAAAHLKGQAVDLFSIIFHMQ 134
Query: 458 GGAKKVIISAPSADAPMFVVGVNLEAYDPSYKVISNAS 571
GGAKKV+ISAPS DAPMFVVGVN + Y ++SNAS
Sbjct: 135 GGAKKVVISAPSKDAPMFVVGVNEKEYKSDVNIVSNAS 172
>04_04_0306 +
24280773-24280776,24280906-24280929,24281023-24281123,
24281359-24281502,24281667-24281782,24281869-24281968,
24282068-24282214,24282329-24282389,24282480-24282577,
24283118-24283260,24283374-24283457,24283538-24283627,
24284018-24284063
Length = 385
Score = 134 bits (324), Expect = 5e-32
Identities = 64/111 (57%), Positives = 83/111 (74%), Gaps = 2/111 (1%)
Frame = +2
Query: 245 MVYLFQYDSTHGRFKG-TVEAVDGHLVVNGKK-IAVFSERDPHAIPWGQAGAEYVVESTG 418
+ Y+F+YD+ HG++K V+ D ++ G+K + VF R+P IPWG+ GAE+VVESTG
Sbjct: 91 VTYMFKYDTVHGQWKHHEVKVKDSKTLLFGEKEVTVFGCRNPEEIPWGETGAEFVVESTG 150
Query: 419 VFTTTDKASAHLVGGAKKVIISAPSADAPMFVVGVNLEAYDPSYKVISNAS 571
VFT DKA+AHL GGAKKV+ISAPS DAPMFVVGVN + Y P ++SNAS
Sbjct: 151 VFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGVNEKEYKPDIDIVSNAS 201
Score = 55.6 bits (128), Expect = 3e-08
Identities = 26/43 (60%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Frame = +2
Query: 134 KIGINGFGRIGRLVLRASIDK-GADVVAINDPFIGLDYMVYLF 259
KIGINGFGRIGRLV R ++ ++VA+NDPFI DYM+ F
Sbjct: 5 KIGINGFGRIGRLVARVALQSDDVELVAVNDPFITTDYMICEF 47
>04_04_0120 +
22911863-22911904,22912002-22912112,22912212-22912764,
22912852-22913354
Length = 402
Score = 132 bits (318), Expect = 2e-31
Identities = 73/152 (48%), Positives = 94/152 (61%), Gaps = 6/152 (3%)
Frame = +2
Query: 134 KIGINGFGRIGRLVLRASIDKG----ADVVAINDPFIGLDYMVYLFQYDSTHGRFKGTVE 301
K+ INGFGRIGR LR +G DV+AIND G+ +L +YDST G F V+
Sbjct: 68 KVAINGFGRIGRNFLRCWHGRGDSSPLDVIAINDTG-GVKQASHLLKYDSTLGIFDADVK 126
Query: 302 AV-DGHLVVNGKKIAVFSERDPHAIPWGQAGAEYVVESTGVFTTTDKASAHLVGGAKKVI 478
V D + V+GK I V S+R+P +PWG+ G + V+E TGVF D A H+ GAKKV+
Sbjct: 127 PVGDNAISVDGKVIKVVSDRNPSNLPWGELGIDLVIEGTGVFVDRDGAGKHIQAGAKKVL 186
Query: 479 ISAP-SADAPMFVVGVNLEAYDPSYKVISNAS 571
I+AP D P +VVGVN + Y P +ISNAS
Sbjct: 187 ITAPGKGDIPTYVVGVNADQYSPDEPIISNAS 218
>03_01_0208 +
1642041-1642118,1642200-1642310,1643157-1643318,
1643433-1643600,1643683-1643843,1643930-1643991,
1644078-1644127,1644247-1644653,1644760-1644895
Length = 444
Score = 114 bits (275), Expect = 4e-26
Identities = 69/153 (45%), Positives = 90/153 (58%), Gaps = 7/153 (4%)
Frame = +2
Query: 134 KIGINGFGRIGRLVLRASIDKG---ADVVAINDPFIGLDYMVYLFQYDSTHGRFKGTVEA 304
K+ INGFGRIGR LR ++ +VV +ND G+ +L +YDS G FK V+
Sbjct: 79 KVAINGFGRIGRNFLRCWHERENSPLEVVVVNDSG-GVRNASHLLKYDSMLGTFKADVKI 137
Query: 305 VDGHLV-VNGKKIAVFSERDPHAIPWGQAGAEYVVESTGVFTTTDKASAHLVGGAKKVII 481
VD + V+GK I V S RDP +PW + G + V+E TGVF A H+ GAKKVII
Sbjct: 138 VDDQTISVDGKLIKVVSNRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVII 197
Query: 482 SAPS--ADAPMFVVGVNLEAYDPSY-KVISNAS 571
+AP+ AD P +V+GVN Y +ISNAS
Sbjct: 198 TAPAKGADIPTYVLGVNEGDYSHEVANIISNAS 230
>02_04_0371 + 22434710-22435102,22435428-22435624,22435707-22435824,
22436458-22436574,22436702-22436803,22437431-22437487,
22437976-22438044,22438423-22438533,22438597-22438791,
22439023-22439121,22439656-22440222,22440344-22440568,
22441036-22441338,22441640-22441707,22441947-22442105,
22442230-22442475,22442549-22442680,22443243-22443351,
22444131-22444283,22444359-22444601,22444695-22444862,
22445013-22445156,22445238-22445699,22446495-22446791,
22446867-22447024,22447139-22447246,22447474-22447732
Length = 1752
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -1
Query: 253 VDHVVKTNERIIDSNNIGTLINRSTEHQAT 164
VD VV+ RI+D+ N +I+ T+H AT
Sbjct: 991 VDCVVEVENRIVDNANFHRIISMFTDHSAT 1020
>08_02_1628 +
28363476-28363517,28363624-28363791,28363863-28363937,
28364018-28364070,28364559-28364709,28365079-28365261,
28366110-28366236,28366731-28366831,28367156-28367294,
28367359-28367420,28367702-28367754,28368266-28368290
Length = 392
Score = 29.5 bits (63), Expect = 2.0
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -2
Query: 534 ASRLTPTTNMGASALGAEMITFLAPPTK*AEALSVVVNTPV 412
+ L TT G + +GA + F++ P+K SVVVN V
Sbjct: 327 SEELIDTTGAGDAFIGAVLYAFVSGPSKFCSVKSVVVNLAV 367
>06_03_0975 -
26471438-26472109,26472189-26472284,26472372-26472482,
26472494-26472530,26472566-26472576,26472674-26473050,
26474310-26474895
Length = 629
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/46 (30%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +2
Query: 107 KYT-LTIIMSKIGINGFGRIGRLVLRASIDKGADVVAINDPFIGLD 241
KY ++++ + I GFG++G V R + G D+++ +DP+ +D
Sbjct: 202 KYVGVSLVGKTLAIMGFGKVGSEVARRAKGLGMDIIS-HDPYAPVD 246
>06_01_0580 +
4148969-4149101,4149394-4149546,4149682-4150095,
4150218-4150294,4151479-4152699,4153057-4153128
Length = 689
Score = 28.7 bits (61), Expect = 3.4
Identities = 19/78 (24%), Positives = 36/78 (46%)
Frame = -1
Query: 295 GTLETTVSRIILEKVDHVVKTNERIIDSNNIGTLINRSTEHQATDATKTVNSDFRHDYGK 116
G ++ ++ +K DH+ +N II S+ T + T+ T + + F H+ G
Sbjct: 548 GGASNSLQKMDGQKQDHIQSSN--IIWSSMPSTQLPSDTQIHNTQNQRLDSGSFNHNIGA 605
Query: 115 SIFSQRSHSTFTLHKMEF 62
+ Q + S L +M+F
Sbjct: 606 HLADQTNASASILPQMKF 623
>01_06_0708 + 31363851-31364063,31364314-31364439,31364646-31365755
Length = 482
Score = 28.7 bits (61), Expect = 3.4
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +2
Query: 329 GKKIAVFSERDPHAIPWGQAGAEYVVESTGVFTTTDK 439
G K+ D + WG+ E + E G+ T+T+K
Sbjct: 445 GNKVDEMKSGDRQHLWWGKRNVEQITEKLGLLTSTEK 481
>07_03_1666 + 28482262-28482385,28482475-28482992
Length = 213
Score = 28.3 bits (60), Expect = 4.6
Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = -2
Query: 525 LTPTTNMGASALGAEMITFLAPPTK*AEALSVVVNTPVDSTTYSAPA*PHG--IAWGSLS 352
+T + MG+ G+ + + PP + S+ TT AP PHG I + +
Sbjct: 81 VTSSEMMGSLMSGSGRVAVITPPPAASGGASLPAAAAAGGTTLVAPVVPHGARILGATAA 140
Query: 351 ENT 343
+NT
Sbjct: 141 DNT 143
>12_01_0935 -
9277421-9277584,9277908-9278111,9280742-9280982,
9282165-9282494
Length = 312
Score = 27.9 bits (59), Expect = 6.0
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 143 INGFGRIGRLVLRASIDKGADVVAINDPFIGLD 241
+ G G IGR ++ AS+ +G + P IGLD
Sbjct: 9 VGGTGYIGRRIVAASLAEGHPTFVLLRPEIGLD 41
>05_04_0288 +
19839597-19839821,19841882-19842107,19842494-19842582,
19845184-19845387,19845463-19845717,19845796-19846011,
19846611-19846766,19846880-19847039,19847702-19847788,
19847789-19847940,19848006-19848143,19848714-19848788,
19849166-19849444
Length = 753
Score = 27.9 bits (59), Expect = 6.0
Identities = 23/97 (23%), Positives = 42/97 (43%)
Frame = -1
Query: 394 STSLTPWNSMGIPLREHSYLLSVYDEVSIYGLNGTLETTVSRIILEKVDHVVKTNERIID 215
ST + WN M P E V +S+ + ++R ++EKV+ VK +
Sbjct: 411 STLIELWNLMDTPTAEQKCFDHVTSLISVSPSTKMPQGCLARELIEKVEVEVKRLNCLKA 470
Query: 214 SNNIGTLINRSTEHQATDATKTVNSDFRHDYGKSIFS 104
S ++ + E + + K+V+ D DY + I +
Sbjct: 471 SKMKELVLKKMIELE--EIYKSVHMDIDSDYERRILN 505
>04_04_1057 -
30451759-30452523,30452627-30452701,30453180-30453254,
30453503-30453591,30454058-30454157,30454244-30454388,
30454609-30454658,30455033-30455114,30455200-30455282,
30455360-30455429,30455523-30455632,30455719-30455872,
30456639-30456796,30457338-30457517
Length = 711
Score = 27.9 bits (59), Expect = 6.0
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -3
Query: 368 HGDPSQRTQLSSFRLRRGVHLRPQRYP*NDRESNH 264
HG P +T SS+ RRG+ + P YP + H
Sbjct: 590 HGSPLGKTP-SSYSKRRGLPMPPHEYPSQHGQGRH 623
>04_04_0678 +
27207340-27207447,27207555-27207668,27209111-27209332,
27209407-27209481,27209569-27209685,27210145-27210395,
27210686-27210761,27210862-27210948,27211037-27211222
Length = 411
Score = 27.9 bits (59), Expect = 6.0
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 101 LRKYTLTIIMSKIGINGFGRIGRLVLRASIDKGADVVAIND 223
L ++ +I S I GFG +G R +KG V+A+ D
Sbjct: 197 LAEHGKSISGSTFVIQGFGNVGSWAARIIHEKGGKVIALGD 237
>12_01_0937 - 9289999-9290046,9290123-9290458
Length = 127
Score = 27.5 bits (58), Expect = 8.0
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 143 INGFGRIGRLVLRASIDKGADVVAINDPFIGLD 241
+ G G IGR ++ AS+ G + P IGLD
Sbjct: 11 VGGTGHIGRRIVAASLAAGHPTSVLLRPEIGLD 43
>02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,
1625603-1625887,1626016-1626030,1626339-1626419,
1626909-1627322,1627423-1627719,1627801-1629864
Length = 3057
Score = 27.5 bits (58), Expect = 8.0
Identities = 19/79 (24%), Positives = 36/79 (45%)
Frame = -1
Query: 355 LREHSYLLSVYDEVSIYGLNGTLETTVSRIILEKVDHVVKTNERIIDSNNIGTLINRSTE 176
L+++S + + DE S G +T +S +E+ D + T + SNN + E
Sbjct: 1855 LQDNSLVYFIQDETSELGE----KTQISANRIEENDDHISTEDTEETSNNTNLVKEGPNE 1910
Query: 175 HQATDATKTVNSDFRHDYG 119
H ++ + ++ HD G
Sbjct: 1911 HGSSQTSNVQDNKQLHDVG 1929
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,811,748
Number of Sequences: 37544
Number of extensions: 364513
Number of successful extensions: 943
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 897
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 928
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1317005676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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