Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_F22
(571 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g16300.1 68414.m01951 glyceraldehyde 3-phosphate dehydrogenas... 202 2e-52
At1g79530.1 68414.m09271 glyceraldehyde 3-phosphate dehydrogenas... 200 4e-52
At1g13440.1 68414.m01570 glyceraldehyde 3-phosphate dehydrogenas... 177 6e-45
At3g04120.1 68416.m00436 glyceraldehyde-3-phosphate dehydrogenas... 176 1e-44
At1g12900.1 68414.m01498 glyceraldehyde 3-phosphate dehydrogenas... 127 6e-30
At3g26650.1 68416.m03330 glyceraldehyde 3-phosphate dehydrogenas... 121 4e-28
At1g42970.1 68414.m04947 glyceraldehyde-3-phosphate dehydrogenas... 117 5e-27
At3g03910.1 68416.m00405 glutamate dehydrogenase, putative simil... 32 0.23
At4g15420.1 68417.m02359 PRLI-interacting factor K nearly identi... 31 0.72
At5g18170.1 68418.m02133 glutamate dehydrogenase 1 (GDH1) identi... 29 1.7
At5g22510.1 68418.m02627 beta-fructofuranosidase, putative / inv... 27 6.7
At5g07920.1 68418.m00916 diacylglycerol kinase 1 (DGK1) identica... 27 8.8
At5g07440.1 68418.m00851 glutamate dehydrogenase 2 (GDH2) identi... 27 8.8
>At1g16300.1 68414.m01951 glyceraldehyde 3-phosphate dehydrogenase,
cytosolic, putative / NAD-dependent
glyceraldehyde-3-phosphate dehydrogenase, putative
similar to glyceraldehyde-3-phosphate dehydrogenase
[Pinus sylvestris] GI:1100223; contains Pfam profiles
PF02800: Glyceraldehyde 3-phosphate dehydrogenase
C-terminal domain, PF00044: Glyceraldehyde 3-phosphate
dehydrogenase NAD binding domain
Length = 420
Score = 202 bits (492), Expect = 2e-52
Identities = 96/149 (64%), Positives = 117/149 (78%), Gaps = 2/149 (1%)
Frame = +2
Query: 131 SKIGINGFGRIGRLVLR-ASIDKGADVVAINDPFIGLDYMVYLFQYDSTHGRFKGTVEAV 307
+K+GINGFGRIGRLVLR A+ +VVA+NDPFI YM Y+F+YDSTHG +KGT+ +
Sbjct: 85 TKVGINGFGRIGRLVLRIATFRDDIEVVAVNDPFIDAKYMAYMFKYDSTHGNYKGTINVI 144
Query: 308 DGH-LVVNGKKIAVFSERDPHAIPWGQAGAEYVVESTGVFTTTDKASAHLVGGAKKVIIS 484
D L +NGK++ V S+RDP IPW GAEYVVES+GVFTT +AS+HL GGAKKVIIS
Sbjct: 145 DDSTLEINGKQVKVVSKRDPAEIPWADLGAEYVVESSGVFTTVGQASSHLKGGAKKVIIS 204
Query: 485 APSADAPMFVVGVNLEAYDPSYKVISNAS 571
APSADAPMFVVGVN + Y P+ ++SNAS
Sbjct: 205 APSADAPMFVVGVNEKTYLPNMDIVSNAS 233
>At1g79530.1 68414.m09271 glyceraldehyde 3-phosphate dehydrogenase,
cytosolic, putative / NAD-dependent
glyceraldehyde-3-phosphate dehydrogenase, putative
similar to glyceraldehyde-3-phosphate dehydrogenase
[Pinus sylvestris] GI:1100223; contains Pfam profiles
PF02800: Glyceraldehyde 3-phosphate dehydrogenase
C-terminal domain, PF00044: Glyceraldehyde 3-phosphate
dehydrogenase NAD binding domain
Length = 422
Score = 200 bits (489), Expect = 4e-52
Identities = 94/149 (63%), Positives = 115/149 (77%), Gaps = 2/149 (1%)
Frame = +2
Query: 131 SKIGINGFGRIGRLVLRASIDKG-ADVVAINDPFIGLDYMVYLFQYDSTHGRFKGTVEAV 307
+K+GINGFGRIGRLVLR + + +VVA+NDPFI YM Y+ +YDSTHG FKG++ +
Sbjct: 87 TKVGINGFGRIGRLVLRIATSRDDIEVVAVNDPFIDAKYMAYMLKYDSTHGNFKGSINVI 146
Query: 308 DGH-LVVNGKKIAVFSERDPHAIPWGQAGAEYVVESTGVFTTTDKASAHLVGGAKKVIIS 484
D L +NGKK+ V S+RDP IPW GA+YVVES+GVFTT KA++HL GGAKKVIIS
Sbjct: 147 DDSTLEINGKKVNVVSKRDPSEIPWADLGADYVVESSGVFTTLSKAASHLKGGAKKVIIS 206
Query: 485 APSADAPMFVVGVNLEAYDPSYKVISNAS 571
APSADAPMFVVGVN Y P+ ++SNAS
Sbjct: 207 APSADAPMFVVGVNEHTYQPNMDIVSNAS 235
>At1g13440.1 68414.m01570 glyceraldehyde 3-phosphate dehydrogenase,
cytosolic, putative / NAD-dependent
glyceraldehyde-3-phosphate dehydrogenase, putative very
strong similarity to SP|P25858 Glyceraldehyde
3-phosphate dehydrogenase, cytosolic (EC 1.2.1.12)
{Arabidopsis thaliana}; contains Pfam profiles PF02800:
Glyceraldehyde 3-phosphate dehydrogenase C-terminal
domain, PF00044: Glyceraldehyde 3-phosphate
dehydrogenase NAD binding domain
Length = 338
Score = 177 bits (430), Expect = 6e-45
Identities = 87/149 (58%), Positives = 108/149 (72%), Gaps = 3/149 (2%)
Frame = +2
Query: 134 KIGINGFGRIGRLVLRASIDKG-ADVVAINDPFIGLDYMVYLFQYDSTHGRFKGTVEAV- 307
+IGINGFGRIGRLV R + + ++VA+NDPFI +YM Y+F+YDS HG++K V
Sbjct: 7 RIGINGFGRIGRLVARVVLQRDDVELVAVNDPFITTEYMTYMFKYDSVHGQWKHHELKVK 66
Query: 308 -DGHLVVNGKKIAVFSERDPHAIPWGQAGAEYVVESTGVFTTTDKASAHLVGGAKKVIIS 484
D L+ K + VF R+P IPWG+AGA++VVESTGVFT DKA+AHL GGAKKV+IS
Sbjct: 67 DDKTLLFGEKPVTVFGIRNPEDIPWGEAGADFVVESTGVFTDKDKAAAHLKGGAKKVVIS 126
Query: 485 APSADAPMFVVGVNLEAYDPSYKVISNAS 571
APS DAPMFVVGVN Y ++SNAS
Sbjct: 127 APSKDAPMFVVGVNEHEYKSDLDIVSNAS 155
>At3g04120.1 68416.m00436 glyceraldehyde-3-phosphate dehydrogenase,
cytosolic (GAPC) / NAD-dependent
glyceraldehyde-3-phosphate dehydrogenase identical to
SP|P25858 Glyceraldehyde 3-phosphate dehydrogenase,
cytosolic (EC 1.2.1.12) {Arabidopsis thaliana}
Length = 338
Score = 176 bits (428), Expect = 1e-44
Identities = 86/149 (57%), Positives = 110/149 (73%), Gaps = 3/149 (2%)
Frame = +2
Query: 134 KIGINGFGRIGRLVLRASIDKG-ADVVAINDPFIGLDYMVYLFQYDSTHGRFK-GTVEAV 307
+IGINGFGRIGRLV R + + ++VA+NDPFI +YM Y+F+YDS HG++K ++
Sbjct: 7 RIGINGFGRIGRLVARVVLQRDDVELVAVNDPFITTEYMTYMFKYDSVHGQWKHNELKIK 66
Query: 308 DGHLVVNGKK-IAVFSERDPHAIPWGQAGAEYVVESTGVFTTTDKASAHLVGGAKKVIIS 484
D ++ G+K + VF R+P IPW +AGA+YVVESTGVFT DKA+AHL GGAKKV+IS
Sbjct: 67 DEKTLLFGEKPVTVFGIRNPEDIPWAEAGADYVVESTGVFTDKDKAAAHLKGGAKKVVIS 126
Query: 485 APSADAPMFVVGVNLEAYDPSYKVISNAS 571
APS DAPMFVVGVN Y ++SNAS
Sbjct: 127 APSKDAPMFVVGVNEHEYKSDLDIVSNAS 155
>At1g12900.1 68414.m01498 glyceraldehyde 3-phosphate dehydrogenase,
chloroplast, putative / NADP-dependent
glyceraldehydephosphate dehydrogenase, putative similar
to SP|P25856 Glyceraldehyde 3-phosphate dehydrogenase A,
chloroplast precursor (EC 1.2.1.13) (NADP-dependent
glyceraldehydephosphate dehydrogenase subunit A)
{Arabidopsis thaliana}; contains Pfam profiles PF02800:
Glyceraldehyde 3-phosphate dehydrogenase C-terminal
domain, PF00044: Glyceraldehyde 3-phosphate
dehydrogenase NAD binding domain
Length = 399
Score = 127 bits (306), Expect = 6e-30
Identities = 73/151 (48%), Positives = 91/151 (60%), Gaps = 5/151 (3%)
Frame = +2
Query: 134 KIGINGFGRIGRLVLRA---SIDKGADVVAINDPFIGLDYMVYLFQYDSTHGRFKGTVE- 301
K+ INGFGRIGR LR D DVV IND G+ +L +YDST G F V+
Sbjct: 66 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTG-GVKQASHLLKYDSTLGIFDADVKP 124
Query: 302 AVDGHLVVNGKKIAVFSERDPHAIPWGQAGAEYVVESTGVFTTTDKASAHLVGGAKKVII 481
+ D L V+GK I + S+R+P +PWG+ G + V+E TGVF D A HL GAKKV+I
Sbjct: 125 SGDSALSVDGKIIKIVSDRNPSNLPWGELGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLI 184
Query: 482 SAP-SADAPMFVVGVNLEAYDPSYKVISNAS 571
+AP D P +VVGVN E Y +ISNAS
Sbjct: 185 TAPGKGDIPTYVVGVNAELYSHEDTIISNAS 215
>At3g26650.1 68416.m03330 glyceraldehyde 3-phosphate dehydrogenase
A, chloroplast (GAPA) / NADP-dependent
glyceraldehydephosphate dehydrogenase subunit A
identical to SP|P25856 Glyceraldehyde 3-phosphate
dehydrogenase A, chloroplast precursor (EC 1.2.1.13)
(NADP-dependent glyceraldehydephosphate dehydrogenase
subunit A) {Arabidopsis thaliana}
Length = 396
Score = 121 bits (291), Expect = 4e-28
Identities = 69/151 (45%), Positives = 91/151 (60%), Gaps = 5/151 (3%)
Frame = +2
Query: 134 KIGINGFGRIGRLVLRA---SIDKGADVVAINDPFIGLDYMVYLFQYDSTHGRFKGTVE- 301
K+ INGFGRIGR LR D D++AIND G+ +L +YDST G F V+
Sbjct: 63 KVAINGFGRIGRNFLRCWHGRKDSPLDIIAINDTG-GVKQASHLLKYDSTLGIFDADVKP 121
Query: 302 AVDGHLVVNGKKIAVFSERDPHAIPWGQAGAEYVVESTGVFTTTDKASAHLVGGAKKVII 481
+ + + V+GK I V S R+P +PW + G + V+E TGVF + A H+ GAKKVII
Sbjct: 122 SGETAISVDGKIIQVVSNRNPSLLPWKELGIDIVIEGTGVFVDREGAGKHIEAGAKKVII 181
Query: 482 SAP-SADAPMFVVGVNLEAYDPSYKVISNAS 571
+AP D P +VVGVN +AY +ISNAS
Sbjct: 182 TAPGKGDIPTYVVGVNADAYSHDEPIISNAS 212
>At1g42970.1 68414.m04947 glyceraldehyde-3-phosphate dehydrogenase
B, chloroplast (GAPB) / NADP-dependent
glyceraldehydephosphate dehydrogenase subunit B
identical to SP|P25857 Glyceraldehyde 3-phosphate
dehydrogenase B, chloroplast precursor (EC 1.2.1.13)
(NADP-dependent glyceraldehydephosphate dehydrogenase
subunit B) {Arabidopsis thaliana}
Length = 447
Score = 117 bits (282), Expect = 5e-27
Identities = 70/158 (44%), Positives = 91/158 (57%), Gaps = 7/158 (4%)
Frame = +2
Query: 119 TIIMSKIGINGFGRIGRLVLRA---SIDKGADVVAINDPFIGLDYMVYLFQYDSTHGRFK 289
T+ K+ INGFGRIGR LR D +VV +ND G+ +L +YDS G FK
Sbjct: 78 TVAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVVLNDSG-GVKNASHLLKYDSMLGTFK 136
Query: 290 GTVEAVDGHLV-VNGKKIAVFSERDPHAIPWGQAGAEYVVESTGVFTTTDKASAHLVGGA 466
V+ VD + V+GK I V S RDP +PW + G + V+E TGVF A H+ GA
Sbjct: 137 AEVKIVDNETISVDGKLIKVVSNRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGA 196
Query: 467 KKVIISAPS--ADAPMFVVGVNLEAYDPSY-KVISNAS 571
KVII+AP+ AD P +V+GVN + Y +ISNAS
Sbjct: 197 SKVIITAPAKGADIPTYVMGVNEQDYGHDVANIISNAS 234
>At3g03910.1 68416.m00405 glutamate dehydrogenase, putative similar
to glutamate dehydrogenase 1 (GDH 1) [Arabidopsis
thaliana] SWISS-PROT:Q43314
Length = 411
Score = 32.3 bits (70), Expect = 0.23
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 101 LRKYTLTIIMSKIGINGFGRIGRLVLRASIDKGADVVAIND 223
L ++ TI + I GFG +G + DKG +VA++D
Sbjct: 197 LNEHGKTISGQRFAIQGFGNVGSWAAKLISDKGGKIVAVSD 237
>At4g15420.1 68417.m02359 PRLI-interacting factor K nearly identical
to PRLI-interacting factor K [Arabidopsis thaliana]
GI:11139266; contains Pfam profiles PF03152: Ubiquitin
fusion degradation protein UFD1, PF00096: Zinc finger,
C2H2 type
Length = 561
Score = 30.7 bits (66), Expect = 0.72
Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = -1
Query: 316 VSIYGLNGTLETTVSRIILEKVDHVVKTNERII-DSNNIGTLINRSTEH 173
+ +YG GT++ VS ++ E +D K ER + S+++ T+ R+ +H
Sbjct: 361 IGVYGFKGTVKYQVSVLVQESIDG-AKVGERAVSSSSDVDTVECRNCKH 408
>At5g18170.1 68418.m02133 glutamate dehydrogenase 1 (GDH1) identical
to glutamate dehydrogenase 1 (GDH 1) [Arabidopsis
thaliana] SWISS-PROT:Q43314
Length = 411
Score = 29.5 bits (63), Expect = 1.7
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +2
Query: 101 LRKYTLTIIMSKIGINGFGRIGRLVLRASIDKGADVVAIND 223
L ++ TI + I GFG +G + +KG +VA++D
Sbjct: 197 LNEHGKTISGQRFVIQGFGNVGSWAAKLISEKGGKIVAVSD 237
>At5g22510.1 68418.m02627 beta-fructofuranosidase, putative /
invertase, putative / saccharase, putative /
beta-fructosidase, putative similar to neutral invertase
[Daucus carota] GI:4200165; contains Pfam profile
PF04853: Plant neutral invertase
Length = 617
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -3
Query: 98 KSLNVHSPQDGVRKCQLKDKVPTNDGD 18
K+++ HSP G+ C K K DGD
Sbjct: 206 KTMDCHSPGQGLMPCSFKVKTVPLDGD 232
>At5g07920.1 68418.m00916 diacylglycerol kinase 1 (DGK1) identical
to diacylglycerol kinase 1 (Diglyceride kinase 1, DGK 1,
DAG kinase 1) [Arabidopsis thaliana] SWISS-PROT:Q39017
Length = 728
Score = 27.1 bits (57), Expect = 8.8
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = -1
Query: 307 YGLNGTLETTVSRIILEKVDHVVKTNERIIDSNNIGTLINRSTEHQATDATKTVN 143
+G N T ++ I ++ + +TNE D+ N G+ + STE A D TVN
Sbjct: 244 HGANELASTALASIRIQSKKYK-QTNETSADTGNSGSNCDESTESTA-DTGPTVN 296
>At5g07440.1 68418.m00851 glutamate dehydrogenase 2 (GDH2) identical
to glutamate dehydrogenase 2 (GDH 2) [Arabidopsis
thaliana] SWISS-PROT:Q38946
Length = 411
Score = 27.1 bits (57), Expect = 8.8
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 143 INGFGRIGRLVLRASIDKGADVVAIND 223
I GFG +G + +KG VVA++D
Sbjct: 211 IQGFGNVGTWAAKLIHEKGGKVVAVSD 237
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,178,733
Number of Sequences: 28952
Number of extensions: 284065
Number of successful extensions: 726
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 712
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1102220672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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