Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_F21
(304 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_55238| Best HMM Match : Serpin (HMM E-Value=0) 35 0.011
SB_55237| Best HMM Match : Serpin (HMM E-Value=0) 34 0.025
SB_38975| Best HMM Match : Serpin (HMM E-Value=0) 32 0.078
SB_27357| Best HMM Match : MFMR (HMM E-Value=3.2) 28 1.3
SB_1509| Best HMM Match : SRR (HMM E-Value=0.22) 28 1.3
SB_51901| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.2
SB_2329| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.2
SB_50937| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.9
SB_47438| Best HMM Match : Not3 (HMM E-Value=0) 27 2.9
SB_24967| Best HMM Match : Drf_FH1 (HMM E-Value=0.65) 26 6.7
SB_5069| Best HMM Match : Fork_head (HMM E-Value=0) 26 6.7
SB_712| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 6.7
SB_33614| Best HMM Match : Ribosomal_S12 (HMM E-Value=6.8) 25 8.9
SB_6916| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.9
SB_10260| Best HMM Match : B1 (HMM E-Value=7.6) 25 8.9
>SB_55238| Best HMM Match : Serpin (HMM E-Value=0)
Length = 345
Score = 35.1 bits (77), Expect = 0.011
Identities = 15/58 (25%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Frame = +2
Query: 137 TMANKIYVGNKYTLDEKFT-ITVRQYQSEVETIDF-SDTKKAADIINQWANEKTRGHI 304
++AN +++ +++ ++FT I + Y +++ +D+ +D + A +NQW E+T+ I
Sbjct: 51 SIANNLFLQKDFSILKEFTDICQKYYDADISLVDYKTDFEGARKHVNQWVEERTKKKI 108
>SB_55237| Best HMM Match : Serpin (HMM E-Value=0)
Length = 363
Score = 33.9 bits (74), Expect = 0.025
Identities = 18/66 (27%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Frame = +2
Query: 113 SEMNPDYFTMANKIYVGNKYTLDEKFTITVRQ-YQSEVETIDFSDTK-KAADIINQWANE 286
S++ + NKI+ +++ + E+F R+ Y SE+ +DF + A +N W ++
Sbjct: 48 SDLGYGEIQLVNKIWGHDEFEILEEFLHGTREFYHSEMAQVDFVNKAFDARKEVNAWVHQ 107
Query: 287 KTRGHI 304
+T+G+I
Sbjct: 108 QTKGNI 113
>SB_38975| Best HMM Match : Serpin (HMM E-Value=0)
Length = 380
Score = 32.3 bits (70), Expect = 0.078
Identities = 15/66 (22%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +2
Query: 113 SEMNPDYFTMANKIYVGNKYTLDEKFTITVRQ-YQSEVETIDF-SDTKKAADIINQWANE 286
S + + MAN+++ + + E+F ++ + +E+ +D+ ++ A D +N+W +
Sbjct: 80 SNSDGNQILMANRLFAQMGFEILEEFKKASKESFSAEMALVDYVKNSNGARDTVNRWVEQ 139
Query: 287 KTRGHI 304
KT+ I
Sbjct: 140 KTKDKI 145
>SB_27357| Best HMM Match : MFMR (HMM E-Value=3.2)
Length = 468
Score = 28.3 bits (60), Expect = 1.3
Identities = 14/51 (27%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Frame = +2
Query: 65 DYSGVANPYISLSKTFSEMNPDYFTMA-NKIYVGNKY-TLDEKFTITVRQY 211
+YS ++ Y++LSK +S ++ +Y T++ N + Y TL + + + Y
Sbjct: 19 NYSTLSRNYLTLSKNYSTLSKNYLTLSKNYSTLSKNYLTLSKNYLTLSKNY 69
>SB_1509| Best HMM Match : SRR (HMM E-Value=0.22)
Length = 644
Score = 28.3 bits (60), Expect = 1.3
Identities = 14/51 (27%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Frame = +2
Query: 65 DYSGVANPYISLSKTFSEMNPDYFTMA-NKIYVGNKY-TLDEKFTITVRQY 211
+YS ++ Y++LSK +S ++ +Y T++ N + Y TL + + + Y
Sbjct: 19 NYSTLSRNYLTLSKNYSTLSKNYLTLSKNYSTLSKNYLTLSKNYLTLSKNY 69
Score = 27.5 bits (58), Expect = 2.2
Identities = 14/50 (28%), Positives = 32/50 (64%), Gaps = 3/50 (6%)
Frame = +2
Query: 65 DYSGVANPYISLSKTFSEMNPDYFTMA-NKIYVGNKY-TLDEKF-TITVR 205
+YS ++ Y++LSK +S ++ +Y T++ N + Y TL + + T++++
Sbjct: 112 NYSTLSKNYLTLSKNYSTLSKNYLTLSKNYSTLSKNYLTLSKNYLTLSIK 161
>SB_51901| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 447
Score = 27.5 bits (58), Expect = 2.2
Identities = 22/95 (23%), Positives = 33/95 (34%)
Frame = +2
Query: 8 KAGAGEGSRAEIDKFLGNGDYSGVANPYISLSKTFSEMNPDYFTMANKIYVGNKYTLDEK 187
K G G G E+ + N + L S N +K+Y+ + +D
Sbjct: 120 KHGFGYGKNGEVILVMPNERLNIKKIMVFELFSVLSGYNFLRILKVDKVYLKKLFLMDNA 179
Query: 188 FTITVRQYQSEVETIDFSDTKKAADIINQWANEKT 292
F+ + S VET F + N AN T
Sbjct: 180 FSTVPGEANSNVETQSFIEASVETFTENMLANHAT 214
>SB_2329| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1181
Score = 27.5 bits (58), Expect = 2.2
Identities = 16/73 (21%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Frame = +2
Query: 71 SGVANPYISLSKTFSEMNPDYFTMANKIYVGNKYTLDEKFTITVRQYQSEVETIDFSDTK 250
S P+I + T NP++F ++ + + T DE + + + ++ I +K
Sbjct: 279 SNATTPFIVIQNTLEVKNPNFFEVSLSA-LNQQVTWDEHYVVADVSFGNQSVVIPRRSSK 337
Query: 251 KAADI--INQWAN 283
K + +NQ+ N
Sbjct: 338 KMEGLHDMNQYLN 350
>SB_50937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2480
Score = 27.1 bits (57), Expect = 2.9
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -1
Query: 301 MSSGLLISPLINDVSCFFGIAEVNSFNFALVL 206
+ G++ S LIND C+F VN +N A+++
Sbjct: 1803 LGQGIVESVLINDFGCYF---TVNRYNLAMMV 1831
>SB_47438| Best HMM Match : Not3 (HMM E-Value=0)
Length = 175
Score = 27.1 bits (57), Expect = 2.9
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 8/62 (12%)
Frame = +2
Query: 140 MANKIYVGNKYTLDEKFTITVRQYQSEVETIDFSDTKK--------AADIINQWANEKTR 295
+A KI K + + IT+ Q++SE+E + KK D +N WA EK R
Sbjct: 85 LATKIDPATKEKEEARQWITIDQFESEIELVIAGSKKKKLDKERQDRVDELNDWA-EKHR 143
Query: 296 GH 301
H
Sbjct: 144 FH 145
>SB_24967| Best HMM Match : Drf_FH1 (HMM E-Value=0.65)
Length = 1799
Score = 25.8 bits (54), Expect = 6.7
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +2
Query: 77 VANPYISLSKTFSEMNPDYFTMANKIYVG 163
VAN Y+S + T P T+ NK++ G
Sbjct: 601 VANSYVSSAATHMTRQPARTTIVNKLHAG 629
>SB_5069| Best HMM Match : Fork_head (HMM E-Value=0)
Length = 331
Score = 25.8 bits (54), Expect = 6.7
Identities = 11/60 (18%), Positives = 26/60 (43%)
Frame = +2
Query: 125 PDYFTMANKIYVGNKYTLDEKFTITVRQYQSEVETIDFSDTKKAADIINQWANEKTRGHI 304
P + + + +D+ + T + Q + ++SD+ A + N ++ + GHI
Sbjct: 223 PSSYQLPQVSVARKSFAIDDLMSTTPQYNQDALHKPEYSDSSAAVAVSNSYSGLTSPGHI 282
>SB_712| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 197
Score = 25.8 bits (54), Expect = 6.7
Identities = 10/48 (20%), Positives = 22/48 (45%)
Frame = +2
Query: 68 YSGVANPYISLSKTFSEMNPDYFTMANKIYVGNKYTLDEKFTITVRQY 211
Y + Y ++ + + P YFT+ + + G +T+ ++ QY
Sbjct: 78 YFTIPPQYFTVPPQYFTVPPQYFTVPPQYFTGQYFTIPPQYFTVPPQY 125
>SB_33614| Best HMM Match : Ribosomal_S12 (HMM E-Value=6.8)
Length = 201
Score = 25.4 bits (53), Expect = 8.9
Identities = 10/39 (25%), Positives = 21/39 (53%)
Frame = +3
Query: 174 LWMRNSRSLSVSTKAKLKLLTSAIPKKQLTSLISGLMRR 290
LW+ ++L S+++ +++LTS P L + + R
Sbjct: 70 LWVSRGKALRSSSQSAVRVLTSGAPSSVLNYVFASTSNR 108
>SB_6916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2670
Score = 25.4 bits (53), Expect = 8.9
Identities = 9/40 (22%), Positives = 19/40 (47%)
Frame = +2
Query: 83 NPYISLSKTFSEMNPDYFTMANKIYVGNKYTLDEKFTITV 202
NP ++L+ +P+ T A ++ N DE+ + +
Sbjct: 226 NPSVALASVVGFFSPEVITTATRLAASNPAVTDERMALAL 265
>SB_10260| Best HMM Match : B1 (HMM E-Value=7.6)
Length = 138
Score = 25.4 bits (53), Expect = 8.9
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +2
Query: 89 YISLSKTFSEMNPDYFTMANKIYVGNKYTLDEKFTIT 199
Y + S +YF+ A+K Y KY L +K + T
Sbjct: 56 YRTNSSRIKSQRNEYFSKASKAYSEGKYNLAKKLSQT 92
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,115,596
Number of Sequences: 59808
Number of extensions: 169764
Number of successful extensions: 471
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 418
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 463
length of database: 16,821,457
effective HSP length: 71
effective length of database: 12,575,089
effective search space used: 364677581
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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