Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_F21
(304 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g02280.1 68416.m00209 flavodoxin family protein low similarit... 29 0.79
At1g70900.1 68414.m08181 expressed protein 28 1.0
At5g19010.1 68418.m02258 mitogen-activated protein kinase, putat... 28 1.4
At4g01290.1 68417.m00170 expressed protein 28 1.4
At3g55340.1 68416.m06146 RNA recognition motif (RRM)-containing ... 27 1.8
At1g23110.1 68414.m02889 hypothetical protein 27 2.4
At3g47260.1 68416.m05133 Ulp1 protease family protein contains P... 26 5.6
At3g44500.1 68416.m04783 Ulp1 protease family protein similar to... 26 5.6
At3g30440.1 68416.m03851 Ulp1 protease family protein contains P... 26 5.6
At2g14130.1 68415.m01574 Ulp1 protease family protein contains P... 26 5.6
At1g04250.1 68414.m00416 auxin-responsive protein / indoleacetic... 26 5.6
At5g57590.1 68418.m07195 aminotransferase class III family prote... 25 7.4
At5g34900.1 68418.m04114 Ulp1 protease family protein contains P... 25 7.4
At3g32900.1 68416.m04166 Ulp1 protease family protein similar to... 25 7.4
At2g31940.1 68415.m03901 expressed protein 25 7.4
At4g26560.1 68417.m03828 calcineurin B-like protein, putative si... 25 9.7
At4g11120.1 68417.m01804 translation elongation factor Ts (EF-Ts... 25 9.7
At4g04010.1 68417.m00571 Ulp1 protease family protein contains P... 25 9.7
At3g15390.1 68416.m01951 expressed protein low similarity to PRL... 25 9.7
At1g05180.2 68414.m00521 auxin-resistance protein AXR1 (AXR1) id... 25 9.7
At1g05180.1 68414.m00522 auxin-resistance protein AXR1 (AXR1) id... 25 9.7
>At3g02280.1 68416.m00209 flavodoxin family protein low similarity
to SP|Q05001 NADPH-cytochrome P450 reductase (EC
1.6.2.4) {Catharanthus roseus}, similar to
NADPH-dependent FMN and FAD containing oxidoreductase
[Homo sapiens] GI:6694369; contains Pfam profiles
PF00258: flavodoxin, PF00667: FAD binding domain,
PF00175: Oxidoreductase NAD-binding domain
Length = 623
Score = 28.7 bits (61), Expect = 0.79
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Frame = +2
Query: 26 GSRAEIDKFLGNGD----YSGVANPY-ISLSKTFSEMNPDYFTMANKIYVGNKYTLDE-K 187
G+ I+K LG+ Y G +P+ +SL +T ++NP YF + + +D+ K
Sbjct: 123 GATTIIEKGLGDDQHPSGYEGTLDPWMLSLWRTLYQINPKYFPKGPDVKIPQDEVIDKPK 182
Query: 188 FTITV-RQYQSEVETIDFSD 244
+ I +Q + E + + SD
Sbjct: 183 YRILFHKQEKLEPKLLSDSD 202
>At1g70900.1 68414.m08181 expressed protein
Length = 244
Score = 28.3 bits (60), Expect = 1.0
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +2
Query: 29 SRAEIDKFLGNGDYSGVANPYISLSKTFSEMNPDYFTMANKI 154
SR + K+L DY+ +A I L++ E NP + A+ +
Sbjct: 122 SRGKFRKYLRWADYTMIATATICLTRALREENPKFLMAASAL 163
>At5g19010.1 68418.m02258 mitogen-activated protein kinase,
putative / MAPK, putative (MPK16) mitogen-activated
protein kinase (MAPK)(AtMPK16), PMID:12119167; similar
to ATMPK9, Arabidopsis thaliana, EMBL:AB038694
Length = 567
Score = 27.9 bits (59), Expect = 1.4
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 20 GEGSRAEIDKFLGNGDYSGVANPY 91
GEGSR I++ +G G Y V + Y
Sbjct: 20 GEGSRYRIEEVIGKGSYGVVCSAY 43
>At4g01290.1 68417.m00170 expressed protein
Length = 991
Score = 27.9 bits (59), Expect = 1.4
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Frame = +3
Query: 144 PIKSTSEINILWMRNSRSLSVSTKAKLKLLT----SAIPKKQLTSLISGLMRRP 293
P+ + + + M R SV +A LL+ S+ PK Q T L+S RRP
Sbjct: 584 PVDQDTSVPSVKMTKQRKTSVDDQASQHLLSLLQRSSDPKSQDTQLLSATERRP 637
>At3g55340.1 68416.m06146 RNA recognition motif (RRM)-containing
protein low similarity to nucleolar phosphoprotein
(Nopp52), Tetrahymena thermophila, EMBL:TT51555;
contains InterPro entry IPR000504: RNA-binding region
RNP-1 (RNA recognition motif) (RRM)
Length = 597
Score = 27.5 bits (58), Expect = 1.8
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +2
Query: 44 DKFLGNGDYSGVANPYISLSKTFSEMNPDYFTMANKIYVGN 166
D++L Y P I KT S P+ N++Y+GN
Sbjct: 228 DRYLTIQQYVKTTTPSIPRRKTSSGFAPEMVDGYNRVYIGN 268
>At1g23110.1 68414.m02889 hypothetical protein
Length = 261
Score = 27.1 bits (57), Expect = 2.4
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +2
Query: 29 SRAEIDKFLGNGDYSGVANPYISLSKTFSEMNPDYFTMANKI 154
SR ++ K+L DY+ +A I LS+ NP + A+ +
Sbjct: 139 SRGKLRKYLRWVDYTMIATTTICLSRALRNENPKFLMAASAL 180
>At3g47260.1 68416.m05133 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At1g32840, At4g04010,
At2g06430, At2g15140, At2g04980, At2g14130, At3g44500,
At2g15190, At5g34900, At3g29210, At2g02210, At3g32900
Length = 820
Score = 25.8 bits (54), Expect = 5.6
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = +2
Query: 92 ISLSKTFSEMNPDYFTMANKIYVGNKY--TLDEKF 190
+ L KT E NP+ F + ++VG+ + +DE +
Sbjct: 674 LELMKTRKESNPELFKNKSVVFVGSSFLNVIDESY 708
>At3g44500.1 68416.m04783 Ulp1 protease family protein similar to
At1g32840, At4g04010, At2g06430, At2g15140, At2g04980,
At2g14130, At2g15190, At3g47260, At5g34900, At3g29210,
At2g02210, At3g32900
Length = 805
Score = 25.8 bits (54), Expect = 5.6
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +2
Query: 92 ISLSKTFSEMNPDYFTMANKIYVGNKYTLDE 184
+ L KT E NP+ F + ++VG+ + +E
Sbjct: 642 LELMKTRKESNPELFKNKSVVFVGSSFLNEE 672
>At3g30440.1 68416.m03851 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain
Length = 601
Score = 25.8 bits (54), Expect = 5.6
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = +2
Query: 92 ISLSKTFSEMNPDYFTMANKIYVGNKY--TLDEKF 190
+ L KT E NP+ F + ++VG+ + +DE +
Sbjct: 434 LELMKTRKESNPELFKNKSVVFVGSSFLNVIDESY 468
>At2g14130.1 68415.m01574 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At1g32840, At4g04010,
At2g06430, At2g15140, At2g04980, At3g44500, At2g15190,
At3g47260, At5g34900, At3g29210, At2g02210, At3g32900
Length = 808
Score = 25.8 bits (54), Expect = 5.6
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = +2
Query: 92 ISLSKTFSEMNPDYFTMANKIYVGNKY--TLDEKF 190
+ L KT E NP+ F + ++VG+ + +DE +
Sbjct: 662 LELMKTRKESNPELFKNKSVVFVGSSFLNVIDESY 696
>At1g04250.1 68414.m00416 auxin-responsive protein / indoleacetic
acid-induced protein 17 (IAA17) Identical to SP|P93830
Auxin-responsive protein IAA17 (Indoleacetic
acid-induced protein 17) {Arabidopsis thaliana}; ESTs
gb|H36782 and gb|F14074 come from this gene
Length = 229
Score = 25.8 bits (54), Expect = 5.6
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = +2
Query: 191 TITVRQYQSEVETIDFSDTKKAADIINQW 277
+ T+ ++ E IDF + +K D++N W
Sbjct: 147 SFTMGKHGGEEGMIDFMNERKLMDLVNSW 175
>At5g57590.1 68418.m07195 aminotransferase class III family protein
low similarity to 7,8-diaminopelargonic acid
aminotransferase BioA [Mesorhizobium loti] GI:12044306;
contains Pfam profile PF00202: aminotransferase, class
III
Length = 523
Score = 25.4 bits (53), Expect = 7.4
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 50 FLGNGDYSGVANPYISLSKTFSEMNPDYFTMANKIYVGNK 169
FL NG ++ ISL ++FSE+ P+Y T ++ + +K
Sbjct: 212 FLSNGSWN------ISLPESFSEIAPEYGTFTSRDEIFDK 245
>At5g34900.1 68418.m04114 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At1g32840, At4g04010,
At2g06430, At2g15140, At2g04980, At2g14130, At3g44500,
At2g15190, At3g47260, At3g29210, At2g02210, At3g32900
Length = 767
Score = 25.4 bits (53), Expect = 7.4
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = +2
Query: 92 ISLSKTFSEMNPDYFTMANKIYVGNKY--TLDEKF 190
+ L KT E NP+ F + ++VG+ + +DE +
Sbjct: 575 LELMKTRKESNPELFKNKSVVFVGSSFLNVVDESY 609
>At3g32900.1 68416.m04166 Ulp1 protease family protein similar to
At1g32840, At4g04010, At2g06430, At2g15140, At2g04980,
At2g14130, At3g44500, At2g15190, At3g47260, At5g34900,
At3g29210, At2g02210
Length = 654
Score = 25.4 bits (53), Expect = 7.4
Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = +2
Query: 92 ISLSKTFSEMNPDYFTMANKIYVGNKY--TLDEKF 190
+ L KT E NP+ F ++VG+ + +DE +
Sbjct: 469 LELMKTRKESNPELFKNKTVVFVGSSFLNAIDESY 503
>At2g31940.1 68415.m03901 expressed protein
Length = 120
Score = 25.4 bits (53), Expect = 7.4
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = -1
Query: 289 LLISPLINDVSCFFGIAEVNSFNFALVLTDSDREFLIQSIFISDVDFIGHSEVIRIHLRE 110
LL+ I+ + + + E ++ F L L S L+ F+SD +G IHL E
Sbjct: 22 LLMFVTISWYASYEPVIEGFTYQFKLALMASPLLLLLAVHFLSDDQGVGGMMTSLIHLNE 81
Query: 109 R 107
R
Sbjct: 82 R 82
>At4g26560.1 68417.m03828 calcineurin B-like protein, putative
similar to calcineurin B-like protein 3 [Arabidopsis
thaliana] GI:3309086, calcineurin B-like protein 2
[Arabidopsis thaliana] GI:3309084; contains
INTERPRO:IPR002048 calcium-binding EF-hand domain
Length = 214
Score = 25.0 bits (52), Expect = 9.7
Identities = 8/36 (22%), Positives = 18/36 (50%)
Frame = -1
Query: 274 LINDVSCFFGIAEVNSFNFALVLTDSDREFLIQSIF 167
++ V+C++G F+ A+ TD + + +F
Sbjct: 44 VVEGVTCYYGEMNKEQFHVAIFQTDKNESLFSERVF 79
>At4g11120.1 68417.m01804 translation elongation factor Ts (EF-Ts),
putative similar to ethylene-responsive elongation
factor EF-Ts precursor [Lycopersicon esculentum]
GI:5669636; contains Pfam profile PF00889: Elongation
factor TS
Length = 395
Score = 25.0 bits (52), Expect = 9.7
Identities = 15/53 (28%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +2
Query: 131 YFTMANKIYVGNKY-TLDEKFTITVRQYQSEVETIDFSDTKKAADIINQWANE 286
Y++++++ GN+Y T+ KF T+ QY+S V + S + + I +++E
Sbjct: 15 YYSVSSRFSSGNEYSTVASKFE-TLSQYKSSVPSGYTSLVRGFGNFIRSFSSE 66
>At4g04010.1 68417.m00571 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At1g32840, At2g06430,
At2g15140, At2g04980, At2g14130, At3g44500, At2g15190,
At3g47260, At5g34900, At3g29210, At2g02210, At3g32900
Length = 836
Score = 25.0 bits (52), Expect = 9.7
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 5/48 (10%)
Frame = +2
Query: 92 ISLSKTFSEMNPDYFTMANKIYVGNKY--TLDE---KFTITVRQYQSE 220
+ L KT E NP+ F + ++VG+ + +DE +F +QSE
Sbjct: 646 LELMKTRKESNPELFKNKSVVFVGSSFLNVIDESDMEFLDNKEGFQSE 693
>At3g15390.1 68416.m01951 expressed protein low similarity to
PRLI-interacting factor N [Arabidopsis thaliana]
GI:11139276
Length = 468
Score = 25.0 bits (52), Expect = 9.7
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +2
Query: 212 QSEVETIDFSDTKKAADI 265
+S + +DFSDTKK AD+
Sbjct: 194 KSTEKLLDFSDTKKYADV 211
>At1g05180.2 68414.m00521 auxin-resistance protein AXR1 (AXR1)
identical to SP|P42744 Auxin-resistance protein AXR1
{Arabidopsis thaliana}; contains Pfam profile PF00899:
ThiF family; identical to cDNA ubiquitin activating
enzyme E1-related protein (AXR1) GI:304103
Length = 436
Score = 25.0 bits (52), Expect = 9.7
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +2
Query: 29 SRAEIDKFLGNGDYSGVANPYISL 100
S EI K+L + DYSG YI L
Sbjct: 307 SVTEIQKYLADEDYSGAMGFYILL 330
>At1g05180.1 68414.m00522 auxin-resistance protein AXR1 (AXR1)
identical to SP|P42744 Auxin-resistance protein AXR1
{Arabidopsis thaliana}; contains Pfam profile PF00899:
ThiF family; identical to cDNA ubiquitin activating
enzyme E1-related protein (AXR1) GI:304103
Length = 540
Score = 25.0 bits (52), Expect = 9.7
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +2
Query: 29 SRAEIDKFLGNGDYSGVANPYISL 100
S EI K+L + DYSG YI L
Sbjct: 411 SVTEIQKYLADEDYSGAMGFYILL 434
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,527,002
Number of Sequences: 28952
Number of extensions: 123983
Number of successful extensions: 408
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 397
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 408
length of database: 12,070,560
effective HSP length: 70
effective length of database: 10,043,920
effective search space used: 301317600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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