Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_F20
(528 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein. 24 0.72
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 24 0.72
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 24 0.72
AF243042-1|AAF68438.1| 126|Tribolium castaneum mutant transcrip... 24 0.72
U14732-1|AAC46491.1| 322|Tribolium castaneum fushi-tarazu protein. 23 1.7
AY043292-2|AAK96032.1| 290|Tribolium castaneum homeodomain tran... 23 1.7
AF321227-1|AAK16421.1| 290|Tribolium castaneum Ftz protein. 23 1.7
AM292364-1|CAL23176.2| 353|Tribolium castaneum gustatory recept... 21 5.1
DQ855488-1|ABH88175.1| 112|Tribolium castaneum chemosensory pro... 21 8.9
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 21 8.9
DQ414247-1|ABD63009.2| 414|Tribolium castaneum paired protein. 21 8.9
>U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein.
Length = 283
Score = 24.2 bits (50), Expect = 0.72
Identities = 10/44 (22%), Positives = 21/44 (47%)
Frame = -1
Query: 348 IVSSSQYLQQYRHHNNTCSKPSNEFFDNSYRKRQYFQ*PLYRHQ 217
+V ++ ++ N+ P +FF N + ++Q Q + HQ
Sbjct: 25 VVVDPKFPPSEEYNQNSYIPPGGDFFGNHHIQQQQLQYGYHNHQ 68
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 24.2 bits (50), Expect = 0.72
Identities = 10/44 (22%), Positives = 21/44 (47%)
Frame = -1
Query: 348 IVSSSQYLQQYRHHNNTCSKPSNEFFDNSYRKRQYFQ*PLYRHQ 217
+V ++ ++ N+ P +FF N + ++Q Q + HQ
Sbjct: 25 VVVDPKFPPSEEYNQNSYIPPGGDFFGNHHIQQQQLQYGYHNHQ 68
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 24.2 bits (50), Expect = 0.72
Identities = 10/44 (22%), Positives = 21/44 (47%)
Frame = -1
Query: 348 IVSSSQYLQQYRHHNNTCSKPSNEFFDNSYRKRQYFQ*PLYRHQ 217
+V ++ ++ N+ P +FF N + ++Q Q + HQ
Sbjct: 25 VVVDPKFPPSEEYNQNSYIPPGGDFFGNHHIQQQQLQYGYHNHQ 68
>AF243042-1|AAF68438.1| 126|Tribolium castaneum mutant
transcription factor TcDfd1 protein.
Length = 126
Score = 24.2 bits (50), Expect = 0.72
Identities = 10/44 (22%), Positives = 21/44 (47%)
Frame = -1
Query: 348 IVSSSQYLQQYRHHNNTCSKPSNEFFDNSYRKRQYFQ*PLYRHQ 217
+V ++ ++ N+ P +FF N + ++Q Q + HQ
Sbjct: 25 VVVDPKFPPSEEYNQNSYIPPGGDFFGNHHIQQQQLQYGYHNHQ 68
>U14732-1|AAC46491.1| 322|Tribolium castaneum fushi-tarazu protein.
Length = 322
Score = 23.0 bits (47), Expect = 1.7
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +3
Query: 327 DTEMTTQSVASQLELQRLHTGRT 395
DT+ T QSV S + LH T
Sbjct: 241 DTKFTEQSVTSTFDFLSLHPAET 263
>AY043292-2|AAK96032.1| 290|Tribolium castaneum homeodomain
transcription factor Fushitarazu protein.
Length = 290
Score = 23.0 bits (47), Expect = 1.7
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +3
Query: 327 DTEMTTQSVASQLELQRLHTGRT 395
DT+ T QSV S + LH T
Sbjct: 241 DTKFTEQSVTSTFDFLSLHPAET 263
>AF321227-1|AAK16421.1| 290|Tribolium castaneum Ftz protein.
Length = 290
Score = 23.0 bits (47), Expect = 1.7
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +3
Query: 327 DTEMTTQSVASQLELQRLHTGRT 395
DT+ T QSV S + LH T
Sbjct: 241 DTKFTEQSVTSTFDFLSLHPAET 263
>AM292364-1|CAL23176.2| 353|Tribolium castaneum gustatory receptor
candidate 43 protein.
Length = 353
Score = 21.4 bits (43), Expect = 5.1
Identities = 9/39 (23%), Positives = 17/39 (43%)
Frame = -2
Query: 176 TSLSSFRSWKPFLSEESISLTVFERKSWCWYFR**YGSH 60
T+ R+W L + + K +C+Y+ +G H
Sbjct: 86 TTFYKRRTWTRLLKNLESCAKIKKTKRYCYYYYAFFGVH 124
>DQ855488-1|ABH88175.1| 112|Tribolium castaneum chemosensory
protein 1 protein.
Length = 112
Score = 20.6 bits (41), Expect = 8.9
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 16 IIKVL*IIQKTYKRPW 63
I KVL +QK Y + W
Sbjct: 88 IQKVLAFVQKNYPKEW 103
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 20.6 bits (41), Expect = 8.9
Identities = 9/27 (33%), Positives = 12/27 (44%)
Frame = -2
Query: 287 QVMNFLTILIGNDSIFSSPCIGTKNNA 207
QVM + + N S P +GT A
Sbjct: 267 QVMKYAALATENFSSLLEPAVGTMTGA 293
>DQ414247-1|ABD63009.2| 414|Tribolium castaneum paired protein.
Length = 414
Score = 20.6 bits (41), Expect = 8.9
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +2
Query: 407 NRRYSLKKNVVSLPRTYWGSFSPRR 481
NRR L+K + S S++P R
Sbjct: 270 NRRARLRKQITSAATPLVRSYAPER 294
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,614
Number of Sequences: 336
Number of extensions: 2695
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12782794
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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