Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_F20
(528 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23D3.07 |pup1||20S proteasome component beta 2|Schizosacchar... 191 6e-50
SPBC4C3.10c |||20S proteasome component beta 1|Schizosaccharomyc... 84 1e-17
SPAC4A8.13c |pts1||20S proteasome component beta 5|Schizosacchar... 50 2e-07
SPAC323.02c |||20S proteasome component alpha 5|Schizosaccharomy... 47 2e-06
SPAC13C5.01c ||SPAC31A2.17c|20S proteasome component alpha 3|Sch... 44 1e-05
SPAC22F8.06 |pam1||20S proteasome component beta 6|Schizosacchar... 35 0.009
SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomy... 33 0.026
SPCC1795.04c |||20S proteasome component alpha 7|Schizosaccharom... 32 0.046
SPBC577.10 |||20S proteasome component beta 7|Schizosaccharomyce... 32 0.061
SPAC6G10.04c |||20S proteasome component alpha 6 subunit Pre5|Sc... 28 0.75
SPBC3H7.13 |||FHA domain protein Far10 |Schizosaccharomyces pomb... 26 3.0
SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase ki... 26 3.0
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 26 4.0
SPCC18.18c |fum1|SPCC290.01c|fumarate hydratase|Schizosaccharomy... 25 5.3
SPCC1672.11c |||P-type ATPase |Schizosaccharomyces pombe|chr 3||... 25 7.0
SPBC336.09c |rrn7||RNA polymerase I transcription factor subunit... 25 7.0
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 25 7.0
SPCC5E4.05c |||serine hydrolase |Schizosaccharomyces pombe|chr 3... 25 7.0
SPAC29A4.11 |rga3||GTPase activating protein Rga3|Schizosaccharo... 25 9.2
SPAC22H10.07 |scd2|ral3|scaffold protein Scd2|Schizosaccharomyce... 25 9.2
>SPAC23D3.07 |pup1||20S proteasome component beta
2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 267
Score = 191 bits (465), Expect = 6e-50
Identities = 87/144 (60%), Positives = 106/144 (73%)
Frame = +3
Query: 96 GFSFENCQRNAFLAEKGFPAPKATKTGTTIVGIIYADGVILGADTRATENTVVSDKNCQK 275
GF FE QRN L EKGFP PKAT TGTTIVG+I D ++LGADTRAT +++DKNC+K
Sbjct: 9 GFDFEYYQRNLLLQEKGFPTPKATSTGTTIVGVIAKDCIVLGADTRATAGPIIADKNCKK 68
Query: 276 IHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLFRYQGH 455
+H ++ N++C GAGTAADTE T ++S +EL L+T R V TA T+LK+ LFRYQGH
Sbjct: 69 LHLISPNIWCAGAGTAADTEFVTSMISSNIELHSLYTNRKPRVVTALTMLKQHLFRYQGH 128
Query: 456 IGAALVLGGVDRSGPHIFCIYPHG 527
IGA LVLGG D GPH+F I HG
Sbjct: 129 IGAYLVLGGYDCKGPHLFTIAAHG 152
>SPBC4C3.10c |||20S proteasome component beta 1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 226
Score = 83.8 bits (198), Expect = 1e-17
Identities = 40/117 (34%), Positives = 66/117 (56%), Gaps = 1/117 (0%)
Frame = +3
Query: 168 KTGTTIVGIIYADGVILGADTRATENTVVSDKNCQKIHYLASNMYCCGAGTAADTEMTTQ 347
+ GTTI + Y DGVIL AD+R T ++++ K+ L N++CC +G+AADT+
Sbjct: 22 RMGTTITALRYKDGVILAADSRTTMGAYIANRVTDKLTQLTDNIWCCRSGSAADTQTVAD 81
Query: 348 SVASQLELQRLHTGRTVPVETAATLLKRMLFRYQGHIGAALVLGGVD-RSGPHIFCI 515
+ L + R+ G V TAATL M ++ + + A L++ G D ++G ++ I
Sbjct: 82 LLKYYLSMYRIQFGHDPSVHTAATLASEMCYQNKNMLSAGLIVAGYDEKTGGDVYSI 138
>SPAC4A8.13c |pts1||20S proteasome component beta
5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 50.4 bits (115), Expect = 2e-07
Identities = 29/121 (23%), Positives = 58/121 (47%), Gaps = 3/121 (2%)
Frame = +3
Query: 174 GTTIVGIIYADGVILGADTRATENTVVSDKNCQKIHYLASNMYCCG--AGTAADTEMTTQ 347
GTT + Y G+++ D+RA+ +++ + +K+ + N Y G AG AAD +
Sbjct: 61 GTTTLAFRYQHGIVVCVDSRASAGPLIASQTVKKV--IEINPYLLGTLAGGAADCQFWET 118
Query: 348 SVASQLELQRLHTGRTVPVETAATLLKRMLFRYQGH-IGAALVLGGVDRSGPHIFCIYPH 524
+ + L +L + V A+ +L + + Y+G+ + +L G + G ++ I
Sbjct: 119 VLGMECRLHQLRNKELISVSAASKILSNITYSYKGYGLSMGTMLAGTGKGGTALYYIDSD 178
Query: 525 G 527
G
Sbjct: 179 G 179
>SPAC323.02c |||20S proteasome component alpha 5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 247
Score = 46.8 bits (106), Expect = 2e-06
Identities = 32/136 (23%), Positives = 61/136 (44%), Gaps = 11/136 (8%)
Frame = +3
Query: 153 APKATKTGTTIVGIIYADGVILGADTRATENTVVSDKNCQKIHYLASNMYCCGAGTAADT 332
A +A K G+T +G+ D V+LG + R T + ++ + +K+ + S++ C +G AD
Sbjct: 27 AIEAIKLGSTAIGVKTKDAVVLGVEKRLT-SPLMESHSVEKLFEIDSHIGCAISGLTADA 85
Query: 333 EMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLFRY-QGH----------IGAALVLG 479
+ Q + R +E+ + + R+ +G G AL++
Sbjct: 86 RTIIEHARVQTQNHRFTYDEPQGIESTTQSICDLALRFGEGEDGEERIMSRPFGVALLIA 145
Query: 480 GVDRSGPHIFCIYPHG 527
G+D GP ++ P G
Sbjct: 146 GIDEHGPQLYHSEPSG 161
>SPAC13C5.01c ||SPAC31A2.17c|20S proteasome component alpha
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 248
Score = 44.4 bits (100), Expect = 1e-05
Identities = 25/91 (27%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Frame = +3
Query: 186 VGIIYADGVILGADTRATENTVVSDKNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQL 365
+GI+ DG++L A+ + T + +++ +K++++ NM C AG AD + + A ++
Sbjct: 35 LGIVAKDGIVLAAEKKVTSKLLEQEESAEKLYHIGDNMLCAVAGLTADANILI-NYARRV 93
Query: 366 ELQRLHT-GRTVPVETAATLLKRMLFRYQGH 455
Q L T +P E L++R+ QG+
Sbjct: 94 GQQYLQTFNEEMPCE---QLVRRVCDLKQGY 121
>SPAC22F8.06 |pam1||20S proteasome component beta
6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 225
Score = 34.7 bits (76), Expect = 0.009
Identities = 27/128 (21%), Positives = 58/128 (45%), Gaps = 4/128 (3%)
Frame = +3
Query: 156 PKATKTGTTIVGIIYADG-VILGADTRATENTVVSDKNCQKIHYLASNMYCCGAGTAADT 332
P GTT+ I DG IL DTR+ ++ + ++H + ++ +G AD
Sbjct: 8 PYVQNGGTTVA--IAGDGFAILAGDTRSVNGYNINTRFQPRVHEVGDDLVIGASGFEADA 65
Query: 333 EMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLF--RYQGHIGAALVLGGVDRSGP-H 503
+ + +++L + R + ++ A +++ +L+ R+ + + G+D+ G
Sbjct: 66 LALVKRIQQRIDLYHDNHERKMSAQSCACMVRTLLYGKRFFPYY-VYTTVAGIDKEGKGE 124
Query: 504 IFCIYPHG 527
I+ P G
Sbjct: 125 IYSFDPVG 132
>SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 245
Score = 33.1 bits (72), Expect = 0.026
Identities = 30/149 (20%), Positives = 61/149 (40%), Gaps = 6/149 (4%)
Frame = +3
Query: 99 FSFENCQRNAFLAEKGFPAPKATKTGTTIVGIIYADGVILGADTRATENTVVSDKNCQKI 278
FS N L + + A A G T VGI DGV+L + + T + + +K+
Sbjct: 7 FSLTTFSPNGKLVQIEY-ALNAVNAGVTSVGIKATDGVVLATEKKPTSELAIG-ASLEKV 64
Query: 279 HYLASNMYCCGAGTAADTEMTTQS--VASQLELQRLHT----GRTVPVETAATLLKRMLF 440
+ ++ +G D + +Q ++++ + + E A+ + +
Sbjct: 65 CAITPDIGMVYSGMGPDFRVLVDKSRKVAQTTYKKIYNEYPPTKILVQEIASVMQESTQS 124
Query: 441 RYQGHIGAALVLGGVDRSGPHIFCIYPHG 527
G +L++ G+D GP ++ + P G
Sbjct: 125 GGVRPFGVSLLVAGMDEKGPSLYQVDPSG 153
>SPCC1795.04c |||20S proteasome component alpha
7|Schizosaccharomyces pombe|chr 3|||Manual
Length = 253
Score = 32.3 bits (70), Expect = 0.046
Identities = 30/130 (23%), Positives = 50/130 (38%), Gaps = 5/130 (3%)
Frame = +3
Query: 153 APKATKTGTTIVGIIYADGVILGADTRATENTVVSDKNCQKIHYLASNMYCCGAGTAADT 332
A KA + +T +GI DGVIL + T + N +I + ++ G D
Sbjct: 26 AYKAVENASTCIGIKCEDGVILALEKVVTSKLLKPRVN-NRIGSVDRHIGIATTGFIPDG 84
Query: 333 EMTTQSVASQLELQRLHTGRTVPVETAATLLKR--MLFRYQGHI---GAALVLGGVDRSG 497
+ + + R + G +P A L LF + G + D G
Sbjct: 85 QHIVKRARDEATSWRDNYGSPIPGTVIADRLGNYVQLFTCYSSVRPFGVMSFVATYDSEG 144
Query: 498 PHIFCIYPHG 527
PH++ + P+G
Sbjct: 145 PHLYMVEPNG 154
>SPBC577.10 |||20S proteasome component beta 7|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 262
Score = 31.9 bits (69), Expect = 0.061
Identities = 16/73 (21%), Positives = 39/73 (53%)
Frame = +3
Query: 171 TGTTIVGIIYADGVILGADTRATENTVVSDKNCQKIHYLASNMYCCGAGTAADTEMTTQS 350
TG++++ + +ADGV++ AD A+ ++ + +++ + N G +D + Q
Sbjct: 42 TGSSVLALKFADGVMIAADNLASYGSLARFYDVERLTKVGDNTIVGAGGDISDYQQ-IQR 100
Query: 351 VASQLELQRLHTG 389
+ +LE++ + G
Sbjct: 101 LLEKLEIKEGNYG 113
>SPAC6G10.04c |||20S proteasome component alpha 6 subunit
Pre5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 28.3 bits (60), Expect = 0.75
Identities = 29/130 (22%), Positives = 52/130 (40%), Gaps = 5/130 (3%)
Frame = +3
Query: 153 APKATKTGTTIVGIIYADGVILGADTRATENTVVSDKNCQKIHYLASNMYCCGAGTAADT 332
A +A K G+ VG++ +L A R E K K+ + ++ AG A D
Sbjct: 25 ALEAIKQGSATVGLVSKTHAVLVALKRNAEELSSYQK---KLIRIDDHIGIAIAGLAPDA 81
Query: 333 EMTTQSVASQLELQRLHTGRTVPVETAAT-LLKRMLFRYQGH----IGAALVLGGVDRSG 497
+ + + + + R +PV + + ++ Q + G ++ G D SG
Sbjct: 82 RVLSNYMKQEALSSKTLFTRPIPVRRLMSKVAEKAQINTQEYGRRPYGVGFLVIGYDESG 141
Query: 498 PHIFCIYPHG 527
PH+ P G
Sbjct: 142 PHLLEFQPSG 151
>SPBC3H7.13 |||FHA domain protein Far10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 301
Score = 26.2 bits (55), Expect = 3.0
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -1
Query: 357 KQPIVSSSQYLQQYRHHNNTCS-KPSNEFFDNSYRKRQY 244
K+ ++S S + RH N + S PSN FF++ RQ+
Sbjct: 17 KKLVISPSTIYKIGRHTNKSTSPSPSNLFFNSKVLSRQH 55
>SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase
kinase Win1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1436
Score = 26.2 bits (55), Expect = 3.0
Identities = 8/21 (38%), Positives = 16/21 (76%)
Frame = +1
Query: 238 LKILSFPIRIVKKFITWLRTC 300
+++LSFP R++K+F+ +C
Sbjct: 550 MRLLSFPFRLIKEFLNLRLSC 570
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 25.8 bits (54), Expect = 4.0
Identities = 17/70 (24%), Positives = 34/70 (48%)
Frame = -2
Query: 323 SSTGTTTIHVRSQVMNFLTILIGNDSIFSSPCIGTKNNAVSVNNPYYCSTSLSSFRSWKP 144
SS+ TTT+ + + + G+ + SSP + ++ + + P S+ SS S+
Sbjct: 316 SSSYTTTLTASNTSVTYTGTGTGSATFTSSPPFYSNSSVIPTSVPSSVSSFTSSNSSYTT 375
Query: 143 FLSEESISLT 114
L+ + S+T
Sbjct: 376 TLTASNTSIT 385
Score = 25.4 bits (53), Expect = 5.3
Identities = 16/70 (22%), Positives = 34/70 (48%)
Frame = -2
Query: 323 SSTGTTTIHVRSQVMNFLTILIGNDSIFSSPCIGTKNNAVSVNNPYYCSTSLSSFRSWKP 144
+S+ TTT+ + + F G+ + SSP + ++ + + P S+ SS S+
Sbjct: 424 NSSYTTTLTASNTTVTFTGTGTGSATFTSSPPFYSNSSVIPTSAPSSVSSFTSSNSSYTT 483
Query: 143 FLSEESISLT 114
L+ + ++T
Sbjct: 484 TLTASNTTVT 493
>SPCC18.18c |fum1|SPCC290.01c|fumarate hydratase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 482
Score = 25.4 bits (53), Expect = 5.3
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +2
Query: 428 KNVVSLPRTYWGSFSPRRCGQKWSSYL 508
KN++ + RT+ +P GQ++S Y+
Sbjct: 196 KNIIKIGRTHMQDATPLSLGQEFSGYV 222
>SPCC1672.11c |||P-type ATPase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1315
Score = 25.0 bits (52), Expect = 7.0
Identities = 13/38 (34%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = -2
Query: 329 ICSSTGTTTIHVRSQVMNFL-TILIGNDSIFSSPCIGT 219
I S T++I ++ + ++L + L+ +DSIF P +GT
Sbjct: 7 IRSKRSTSSIASKNSLNSYLASSLMSHDSIFDGPGLGT 44
>SPBC336.09c |rrn7||RNA polymerase I transcription factor subunit
Rrn7 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 537
Score = 25.0 bits (52), Expect = 7.0
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +1
Query: 19 IKVL*IIQKTYKRPWLPYYYLKYQHQDFRSKTVNEMLSS 135
+K+ +QK Y R +P++Y YQ T+ ++L S
Sbjct: 223 LKIFKRLQKNYVRMLIPFHYPTYQRIQSAVLTLVDVLVS 261
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 25.0 bits (52), Expect = 7.0
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -1
Query: 390 GRYVNAAVRVAKQPIVSSSQYLQQYRHHNNTCS 292
G Y+N VR AK + S Q L ++ NNT S
Sbjct: 1201 GNYMNDYVRQAKGFAIGSLQRLPLIKNANNTKS 1233
>SPCC5E4.05c |||serine hydrolase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 378
Score = 25.0 bits (52), Expect = 7.0
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -1
Query: 306 NNTCSKPSNEFFDNSYRKRQYFQ 238
N TCS S EF++N+ K + +Q
Sbjct: 220 NVTCSDSSKEFYENAGTKDKTYQ 242
>SPAC29A4.11 |rga3||GTPase activating protein
Rga3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 969
Score = 24.6 bits (51), Expect = 9.2
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -3
Query: 409 VSTGTVRPVCKRCSSSCEA 353
V T RPVC C+ +C A
Sbjct: 62 VQTSDGRPVCSSCAHTCTA 80
>SPAC22H10.07 |scd2|ral3|scaffold protein Scd2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 536
Score = 24.6 bits (51), Expect = 9.2
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +3
Query: 309 GAGTAADTEMTTQSVASQLELQRLHTG 389
G+G + T++TT S ++ + LH+G
Sbjct: 96 GSGQISFTDLTTNSSTTRSSISELHSG 122
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,175,622
Number of Sequences: 5004
Number of extensions: 42314
Number of successful extensions: 149
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 146
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 216376042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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