Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_F20
(528 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0588 + 5278013-5278153,5278641-5278782,5278923-5279019,527... 212 2e-55
06_01_0285 - 2090427-2090558,2091045-2091119,2091334-2091407,209... 81 4e-16
02_05_0884 - 32483735-32483866,32484417-32484491,32484707-324847... 81 7e-16
05_05_0306 - 23977543-23977614,23977709-23977799,23978296-239783... 56 1e-08
11_06_0394 - 23084485-23084577,23084677-23084802,23085134-230852... 50 2e-06
01_06_1091 + 34464923-34465026,34465124-34465163,34465245-344653... 46 1e-05
03_05_0782 - 27658855-27659211,27660417-27660540,27660714-27660871 38 0.007
03_03_0187 + 15253000-15253207,15253281-15253370,15254338-152544... 37 0.012
09_04_0728 - 19771975-19772093,19772131-19772224,19772322-197725... 36 0.015
02_05_0057 + 25472872-25472912,25473012-25473157,25474008-254740... 36 0.015
09_06_0102 + 20870346-20870518,20870599-20871013,20872180-20872341 33 0.11
08_02_1495 + 27526008-27526390,27526462-27526876,27529162-27529323 33 0.19
05_07_0043 - 27284814-27285190,27285287-27285488,27285576-272856... 29 1.7
05_02_0054 - 6175324-6175905 29 3.1
01_01_0679 - 5213354-5213360,5215051-5215622 28 4.0
12_01_0196 + 1451166-1451443,1453035-1453478,1453569-1454145 27 7.1
10_01_0358 - 3941313-3941328,3942374-3942693,3942774-3942912,394... 27 7.1
09_06_0265 + 21933913-21933993,21934108-21934404 27 7.1
02_03_0143 + 15685242-15686298,15688167-15688265,15688998-156890... 27 7.1
09_02_0479 - 9753161-9753171,9755260-9755547,9755883-9756222 27 9.3
04_04_1050 + 30419673-30419789,30419882-30419977,30420180-304202... 27 9.3
>05_01_0588 +
5278013-5278153,5278641-5278782,5278923-5279019,
5279130-5279199,5279284-5279388,5279531-5279629,
5280062-5280152,5280238-5280311
Length = 272
Score = 212 bits (517), Expect = 2e-55
Identities = 95/147 (64%), Positives = 113/147 (76%)
Frame = +3
Query: 87 PAPGFSFENCQRNAFLAEKGFPAPKATKTGTTIVGIIYADGVILGADTRATENTVVSDKN 266
P GFS++NC RNA L EKG P KTGTTIVG+++ DGV+LGADTRATE +V+DKN
Sbjct: 9 PKGGFSYDNCARNAMLVEKGLKMPGFLKTGTTIVGLVFQDGVVLGADTRATEGPIVADKN 68
Query: 267 CQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLFRY 446
C+KIHY+A N+YCCGAGTAADTE T V+SQL+L R TGR V T+ TLLK LF Y
Sbjct: 69 CEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYATGRESRVVTSLTLLKSHLFSY 128
Query: 447 QGHIGAALVLGGVDRSGPHIFCIYPHG 527
QGH+ AALVLGGVD +GPH+ +YPHG
Sbjct: 129 QGHVSAALVLGGVDVTGPHLHTVYPHG 155
>06_01_0285 -
2090427-2090558,2091045-2091119,2091334-2091407,
2091792-2091903,2092036-2092108,2092291-2092346,
2092679-2092755,2093384-2093525
Length = 246
Score = 81.4 bits (192), Expect = 4e-16
Identities = 40/123 (32%), Positives = 70/123 (56%), Gaps = 1/123 (0%)
Frame = +3
Query: 150 PAPKATKTGTTIVGIIYADGVILGADTRATENTVVSDKNCQKIHYLASNMYCCGAGTAAD 329
P + GTTIVG+ Y GV+L AD+R + V+++ KI L N+Y C +G+AAD
Sbjct: 17 PTSGEHRMGTTIVGVCYDGGVVLAADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAAD 76
Query: 330 TEMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLFRYQGHIGAALVLGGVDR-SGPHI 506
T++ ++ V L + G+ V+ AA L++ + ++ + + A +++GG D+ G I
Sbjct: 77 TQVISEYVRYFLHQHTIQLGQPATVKVAANLIRLLAYQNKNMLQAGMIVGGWDKYEGGQI 136
Query: 507 FCI 515
F +
Sbjct: 137 FSV 139
>02_05_0884 -
32483735-32483866,32484417-32484491,32484707-32484780,
32485180-32485291,32485476-32485548,32485674-32485729,
32486046-32486122,32486799-32486940
Length = 246
Score = 80.6 bits (190), Expect = 7e-16
Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 1/123 (0%)
Frame = +3
Query: 150 PAPKATKTGTTIVGIIYADGVILGADTRATENTVVSDKNCQKIHYLASNMYCCGAGTAAD 329
P + GTTIVG+ Y GV+L AD+R + V+++ KI L N+Y C +G+AAD
Sbjct: 17 PTSGEHRMGTTIVGVCYDGGVVLAADSRTSTGMYVANRASDKITQLTDNVYICRSGSAAD 76
Query: 330 TEMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLFRYQGHIGAALVLGGVDR-SGPHI 506
T++ + V L + G+ V+ AA L++ + ++ + + A +++GG D+ G I
Sbjct: 77 TQVISDYVRYFLHQHTIQLGQPATVKVAANLIRLLAYQNKNMLQAGMIVGGWDKYEGGQI 136
Query: 507 FCI 515
F +
Sbjct: 137 FSV 139
>05_05_0306 -
23977543-23977614,23977709-23977799,23978296-23978361,
23978399-23978479,23979130-23979176,23979408-23979492,
23979570-23979656,23979728-23979801,23980083-23980166,
23980259-23980298,23980386-23980489
Length = 276
Score = 56.4 bits (130), Expect = 1e-08
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 5/130 (3%)
Frame = +3
Query: 153 APKATKTGTTIVGIIYADGVILGADTRATENTVVSDKNCQKIHYLASNMYCCGAGTAADT 332
A KA T+VGI DG++LG + T ++ N +++H + + AG AAD
Sbjct: 27 AGKAVDNSGTVVGIKCKDGIVLGVEKLVTSKMILKGSN-RRLHSVHRHSGLAVAGLAADG 85
Query: 333 EMTTQSVASQLELQRLHTGRTVPVETAATLLKRM-----LFRYQGHIGAALVLGGVDRSG 497
S+ G +PV+ A + L+ + G ++LGG DR G
Sbjct: 86 RQIVSRAKSEAASYEKVYGEPMPVKELADRVASYVHLCTLYWWLRPFGCGVILGGYDRDG 145
Query: 498 PHIFCIYPHG 527
P ++ I P G
Sbjct: 146 PQLYMIEPSG 155
>11_06_0394 -
23084485-23084577,23084677-23084802,23085134-23085236,
23085895-23085953,23086418-23086519,23086601-23086714,
23087666-23087746,23088073-23088154,23088504-23088556
Length = 270
Score = 49.6 bits (113), Expect = 2e-06
Identities = 32/133 (24%), Positives = 62/133 (46%), Gaps = 8/133 (6%)
Frame = +3
Query: 153 APKATKTGTTIVGIIYADGVILGADTRATENTVVSDKNCQKIHYLASNMYCCGAGTAADT 332
A +A K G+T +G+ DGV+L + R T + ++ + +KI + ++ C +G AD
Sbjct: 40 AIEAIKLGSTAIGLKTKDGVVLAVEKRVT-SPLLEPSSVEKIMEIDEHIGCAMSGLIADA 98
Query: 333 EMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLFRY-QGH-------IGAALVLGGVD 488
+ + + R G + VE+ + + R+ +G G +L++ G D
Sbjct: 99 RTLVEHARVETQNHRFSYGEPMTVESTTQAICDLALRFGEGDEESMSRPFGVSLLIAGHD 158
Query: 489 RSGPHIFCIYPHG 527
+GP ++ P G
Sbjct: 159 ENGPSLYYTDPSG 171
>01_06_1091 +
34464923-34465026,34465124-34465163,34465245-34465328,
34465457-34465480,34465582-34465655,34465726-34465812,
34465922-34466006,34466215-34466261,34467048-34467113,
34468307-34468397,34468477-34468548
Length = 257
Score = 46.4 bits (105), Expect = 1e-05
Identities = 36/138 (26%), Positives = 58/138 (42%), Gaps = 13/138 (9%)
Frame = +3
Query: 153 APKATKTGTTIVGIIYADGVILGADTRATENTVV--SDKNCQKIHY------LASNMYCC 308
A KA T+VGI DG++LG + T ++ S++ +H+ + N+
Sbjct: 27 ATKAVDNSGTVVGIKCKDGIVLGVEKLVTSKMMLEGSNRRIHSVHWHSGLDIILINVMAV 86
Query: 309 GAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKRM-----LFRYQGHIGAALV 473
AG AAD S+ G + V+ A + L+ + G ++
Sbjct: 87 -AGLAADGRQIVSRAKSEAASYEKVYGEPISVKELADRVASYVHLCTLYWWLRPFGCGVI 145
Query: 474 LGGVDRSGPHIFCIYPHG 527
LGG DR GP ++ I P G
Sbjct: 146 LGGYDRDGPQLYMIEPSG 163
>03_05_0782 - 27658855-27659211,27660417-27660540,27660714-27660871
Length = 212
Score = 37.5 bits (83), Expect = 0.007
Identities = 20/79 (25%), Positives = 38/79 (48%)
Frame = +3
Query: 183 IVGIIYADGVILGADTRATENTVVSDKNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQ 362
++G++ D ++ ADT A ++ +V + K+ L S+ +G D T+ +
Sbjct: 4 VIGVVGRDFAVVAADTSAVQSILVHKTDEDKVMVLDSHKLMGASGEPGDRVQFTEFIQKN 63
Query: 363 LELQRLHTGRTVPVETAAT 419
L L + +P+ TAAT
Sbjct: 64 LHLYQFR--NNIPLSTAAT 80
>03_03_0187 +
15253000-15253207,15253281-15253370,15254338-15254402,
15254489-15254535,15255195-15255270,15255432-15255499,
15255793-15255862,15256024-15256109,15256328-15256390,
15256472-15256537,15256938-15256986
Length = 295
Score = 36.7 bits (81), Expect = 0.012
Identities = 27/116 (23%), Positives = 52/116 (44%), Gaps = 5/116 (4%)
Frame = +3
Query: 195 IYADGVILGADTRATENTVVSDKNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQ 374
+ A+GV++ + + + +V + + QKI L N+ +G D + + Q +
Sbjct: 99 VAANGVVIATEKKLP-SILVDETSVQKIQSLTPNIGVVYSGMGPDFRVLVRKSRKQAQQY 157
Query: 375 RLHTGRTVPV-----ETAATLLKRMLFRYQGHIGAALVLGGVDRSGPHIFCIYPHG 527
T+PV ETAA + + G +L++ G D +GP ++ + P G
Sbjct: 158 YRLYKETIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLIAGYDDNGPQLYQVDPSG 213
>09_04_0728 -
19771975-19772093,19772131-19772224,19772322-19772507,
19772596-19772767,19772854-19772983,19773060-19773136,
19774109-19774194,19774508-19774585,19775916-19776045,
19776379-19776423,19776508-19776618,19776801-19777057,
19777153-19777302,19777899-19778008,19778426-19778546
Length = 621
Score = 36.3 bits (80), Expect = 0.015
Identities = 27/114 (23%), Positives = 56/114 (49%), Gaps = 4/114 (3%)
Frame = +3
Query: 171 TGTTIVGIIYADGVILGADTRATENTVVSDKNCQKIHYLASNMYCCGAGTAAD-TEMTTQ 347
TG++I+ + Y DGVI+ +DT A+ + + K+ ++I + + +G +D E+
Sbjct: 368 TGSSIIALKYKDGVIMASDTGASYGSTLRYKSVERIKAVGKHSLIGASGEFSDFQEILRY 427
Query: 348 SVASQLELQRLHTGRTVPVETAATLLKRMLFRYQGH---IGAALVLGGVDRSGP 500
L G ++ + + L R+++ + + +LV+GGV + GP
Sbjct: 428 LDELTLSDHMWDDGNSLGPKEVHSYLTRVMYNRRNKFDPLWNSLVIGGV-KKGP 480
>02_05_0057 +
25472872-25472912,25473012-25473157,25474008-25474072,
25474182-25474228,25474922-25474997,25475176-25475243,
25475862-25475931,25476178-25476263,25476418-25476480,
25476556-25476621,25476740-25476788
Length = 258
Score = 36.3 bits (80), Expect = 0.015
Identities = 27/114 (23%), Positives = 51/114 (44%), Gaps = 5/114 (4%)
Frame = +3
Query: 201 ADGVILGADTRATENTVVSDKNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRL 380
A+GV++ + + + +V + + QKI L N+ +G D + + Q +
Sbjct: 64 ANGVVIATEKKLP-SILVDETSVQKIQSLTPNIGVVYSGMGPDFRVLVRKSRKQAQQYYR 122
Query: 381 HTGRTVPV-----ETAATLLKRMLFRYQGHIGAALVLGGVDRSGPHIFCIYPHG 527
T+PV ETAA + + G +L++ G D +GP ++ + P G
Sbjct: 123 LYKETIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLIAGYDDNGPQLYQVDPSG 176
>09_06_0102 + 20870346-20870518,20870599-20871013,20872180-20872341
Length = 249
Score = 33.5 bits (73), Expect = 0.11
Identities = 22/85 (25%), Positives = 40/85 (47%)
Frame = +3
Query: 153 APKATKTGTTIVGIIYADGVILGADTRATENTVVSDKNCQKIHYLASNMYCCGAGTAADT 332
A +A + G VG+ +D V+LG + ++T + ++ +KI L +++ AG AD
Sbjct: 23 ALEAVRKGNAAVGVRGSDTVVLGVEKKSTPK-LQDSRSVRKIASLDTHIALACAGLKADA 81
Query: 333 EMTTQSVASQLELQRLHTGRTVPVE 407
+ + + RL V VE
Sbjct: 82 RVLINRARVECQSHRLTVEDAVTVE 106
>08_02_1495 + 27526008-27526390,27526462-27526876,27529162-27529323
Length = 319
Score = 32.7 bits (71), Expect = 0.19
Identities = 22/85 (25%), Positives = 39/85 (45%)
Frame = +3
Query: 153 APKATKTGTTIVGIIYADGVILGADTRATENTVVSDKNCQKIHYLASNMYCCGAGTAADT 332
A +A + G VG+ D V+LG + ++T + ++ +KI L +++ AG AD
Sbjct: 93 ALEAVRKGNAAVGVRGTDTVVLGVEKKSTPK-LQDSRSMRKIASLDTHIALACAGLKADA 151
Query: 333 EMTTQSVASQLELQRLHTGRTVPVE 407
+ + + RL V VE
Sbjct: 152 RVLINRARVECQSHRLTVEDPVTVE 176
>05_07_0043 -
27284814-27285190,27285287-27285488,27285576-27285650,
27285743-27285816,27285909-27285996,27286081-27286203,
27288374-27288580,27288631-27288636
Length = 383
Score = 29.5 bits (63), Expect = 1.7
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = -2
Query: 332 SICSSTGTTTIHVRSQVMNFLT 267
+ICS+ G TT+HVR Q+ +++
Sbjct: 57 AICSAIGETTVHVRQQIEAYIS 78
>05_02_0054 - 6175324-6175905
Length = 193
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -1
Query: 126 HFVDSFRTKILVLVFQVIIWKPWSLISFL 40
HF ++ +L +VF ++W P SLI FL
Sbjct: 74 HFSMNYAIVVLAVVFLSLLWHPVSLIVFL 102
>01_01_0679 - 5213354-5213360,5215051-5215622
Length = 192
Score = 28.3 bits (60), Expect = 4.0
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -1
Query: 126 HFVDSFRTKILVLVFQVIIWKPWSLISFL 40
H+ ++ +L +VF ++W P SLI FL
Sbjct: 82 HYAMNYAIVVLAVVFLSLLWHPASLIVFL 110
>12_01_0196 + 1451166-1451443,1453035-1453478,1453569-1454145
Length = 432
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 429 RMLFRYQGHIGAALVLGGVDRSGPHIFCIYPH 524
++L R++ +G + +G + PHIF IY H
Sbjct: 149 QLLSRWRHEVGLNIEIGAFLKKYPHIFDIYVH 180
>10_01_0358 -
3941313-3941328,3942374-3942693,3942774-3942912,
3943441-3943543,3944745-3944890,3944941-3945314,
3946416-3946512,3947118-3947566
Length = 547
Score = 27.5 bits (58), Expect = 7.1
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1
Query: 525 HEDKCRRYEDH 493
HED CRR+EDH
Sbjct: 62 HEDHCRRHEDH 72
>09_06_0265 + 21933913-21933993,21934108-21934404
Length = 125
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -1
Query: 153 LETLSQRGKHFVDSFRTKILVLVFQVIIWKPWSLI 49
+E+ + KHFV S K++VLVF +PW L+
Sbjct: 10 IESWDEFTKHFVKS-EDKLVVLVFMAPWSEPWKLM 43
>02_03_0143 +
15685242-15686298,15688167-15688265,15688998-15689072,
15689309-15689364,15689786-15689875
Length = 458
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 429 RMLFRYQGHIGAALVLGGVDRSGPHIFCIYPH 524
++L R++ +G + +G + PHIF IY H
Sbjct: 89 QLLSRWRHEVGLNIEIGAFLKKYPHIFDIYVH 120
>09_02_0479 - 9753161-9753171,9755260-9755547,9755883-9756222
Length = 212
Score = 27.1 bits (57), Expect = 9.3
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = -3
Query: 418 VAAVSTGTVRPVCKRCSS 365
V +V+T T+RP+C RC++
Sbjct: 81 VESVTTATLRPICFRCTN 98
>04_04_1050 +
30419673-30419789,30419882-30419977,30420180-30420264,
30420352-30420386,30420479-30420544,30420646-30420686,
30420818-30420933,30421101-30421207,30421354-30421491,
30421610-30421744,30421888-30421998
Length = 348
Score = 27.1 bits (57), Expect = 9.3
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +3
Query: 210 VILGADTRATENTVVSDKNCQ 272
V LG D ATE +++DK+C+
Sbjct: 273 VFLGPDQAATEERLIADKDCR 293
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,092,012
Number of Sequences: 37544
Number of extensions: 279790
Number of successful extensions: 693
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 682
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 690
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1166441080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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