Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_F19
         (567 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    25   0.45 
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    25   0.60 
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    23   1.4  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    23   1.4  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   5.6  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   7.3  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    21   9.7  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   9.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   9.7  

>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
           subunit protein.
          Length = 243

 Score = 25.0 bits (52), Expect = 0.45
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +3

Query: 303 NPAIATGRAFGVQTLSGTGSLRVGAEFLNKHLKYDTFY 416
           +P +A G+  GV+TLS      VG+EF+      DTF+
Sbjct: 98  DPRLAYGKRPGVETLS------VGSEFIKNIWVPDTFF 129


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 24.6 bits (51), Expect = 0.60
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +3

Query: 9    GHTC*YRKMVSRFEGVEQGPPIEVFLLNKL 98
            G+T  Y+     +E V+ GP +E + L KL
Sbjct: 1428 GYTIHYKPEFGDWETVQIGPTVEKYTLEKL 1457


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +3

Query: 330 FGVQTLSGTGSLRVGAEFLNKHLKYDTFYYS 422
           + +  L G  +LR+G +   K  K D FY+S
Sbjct: 29  YAICKLIGLNTLRIGRKGELKQHKSDYFYFS 59


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +3

Query: 330 FGVQTLSGTGSLRVGAEFLNKHLKYDTFYYS 422
           + +  L G  +LR+G +   K  K D FY+S
Sbjct: 29  YAICKLIGLNTLRIGRKGELKQHKSDYFYFS 59


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 15/65 (23%), Positives = 25/65 (38%), Gaps = 1/65 (1%)
 Frame = +1

Query: 100 LQTIHLKIKLIWVLVHIEMRMESHGCCLSSVRWRNR-WQLMKHYCTNTYQYLVWNSSQRR 276
           LQTI+L+I  IW    + + + S        +   R   +     T+   ++  N    R
Sbjct: 214 LQTINLQITFIWTYNDLFVMLISTALAYRFGQITRRIAAVASEKVTSEKSWIALNDDYNR 273

Query: 277 QCQCC 291
            C  C
Sbjct: 274 LCHLC 278


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +1

Query: 100 LQTIHLKIKLIW 135
           LQTI+L+I  IW
Sbjct: 214 LQTINLQITFIW 225


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 9/34 (26%), Positives = 15/34 (44%)
 Frame = -1

Query: 231 AVMFHQLPSVSPSYGRQATPMAFHSHLYMHQHPN 130
           A +FH   +  P +     P+  H +   H +PN
Sbjct: 148 ASIFHAAATSLPLHYPPPPPVYTHHYARYHPYPN 181


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 5/10 (50%), Positives = 9/10 (90%)
 Frame = -2

Query: 131  INFIFKCIVC 102
            +N +FKC++C
Sbjct: 1081 VNKLFKCMIC 1090


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 5/10 (50%), Positives = 9/10 (90%)
 Frame = -2

Query: 131  INFIFKCIVC 102
            +N +FKC++C
Sbjct: 1081 VNKLFKCMIC 1090


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,562
Number of Sequences: 336
Number of extensions: 3361
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13995094
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)