BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_F19
(567 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT001324-1|AAN71079.1| 448|Drosophila melanogaster AT16867p pro... 214 6e-56
AY339650-1|AAQ01663.1| 416|Drosophila melanogaster aminotransfe... 214 6e-56
AY061313-1|AAL28861.1| 416|Drosophila melanogaster LD23191p pro... 214 6e-56
AE013599-2195|AAF58059.1| 416|Drosophila melanogaster CG8430-PA... 214 6e-56
AE013599-2194|AAM70954.1| 437|Drosophila melanogaster CG8430-PB... 214 6e-56
AE014134-322|AAN10437.1| 431|Drosophila melanogaster CG4233-PB,... 140 2e-33
AE014134-321|AAF51320.1| 424|Drosophila melanogaster CG4233-PA,... 139 3e-33
AY069166-1|AAL39311.1| 393|Drosophila melanogaster GH20337p pro... 135 5e-32
AE014134-323|AAN10438.1| 393|Drosophila melanogaster CG4233-PC,... 135 5e-32
AY070873-1|AAL48495.1| 92|Drosophila melanogaster LD06106p pro... 33 0.20
AE013599-3433|AAF46878.2| 147|Drosophila melanogaster CG30196-P... 33 0.27
AE013599-3144|AAM70856.1| 980|Drosophila melanogaster CG30389-P... 31 1.4
AE013599-3143|AAF46685.2| 980|Drosophila melanogaster CG30389-P... 31 1.4
BT028865-1|ABI34246.2| 198|Drosophila melanogaster RT01153p pro... 28 7.7
BT028832-1|ABI34213.2| 198|Drosophila melanogaster RT01053p pro... 28 7.7
AF166113-1|AAD45410.1| 198|Drosophila melanogaster basic helix-... 28 7.7
AE014134-2944|AAF53678.1| 198|Drosophila melanogaster CG10393-P... 28 7.7
AE014134-490|AAF51194.1| 375|Drosophila melanogaster CG3117-PA ... 28 7.7
AE014134-2738|AAF53546.3| 1700|Drosophila melanogaster CG31738-P... 25 8.1
AY094813-1|AAM11166.1| 1413|Drosophila melanogaster LD30602p pro... 25 8.2
AE014134-2739|AAF53547.2| 1413|Drosophila melanogaster CG31738-P... 25 8.2
>BT001324-1|AAN71079.1| 448|Drosophila melanogaster AT16867p
protein.
Length = 448
Score = 214 bits (523), Expect = 6e-56
Identities = 96/177 (54%), Positives = 127/177 (71%)
Frame = +3
Query: 36 VSRFEGVEQGPPIEVFLLNKLFTDDTFKNKVNLGVGAYRDENGKPWVLPVVRKMEKQMAA 215
+S + V +GP IEVF L + F DD+ NKVNL VGAYR + G PWVLPVVRK E +A+
Sbjct: 33 MSIYADVPKGPAIEVFALTQAFKDDSNPNKVNLSVGAYRTDAGVPWVLPVVRKTEISIAS 92
Query: 216 DETLLHEYLPVLGMEQFSAASVSMLLGEDNPAIATGRAFGVQTLSGTGSLRVGAEFLNKH 395
DE + HEYLPV G+E F+ A+ ++LG D+PAI RAFGVQT+SGTG+LRV A+FL+
Sbjct: 93 DEQVNHEYLPVTGLETFTNAATELVLGADSPAIKENRAFGVQTISGTGALRVAADFLHTQ 152
Query: 396 LKYDTFYYSSPTWENHHLVFVNSGFTKPRTYRYWNAKTRSIDFNGLIEDLKNAPENA 566
L + YYS+PTWENHH +F ++GFT ++YRYW+ R +DF ++ DL +AP A
Sbjct: 153 LNRNVVYYSNPTWENHHKIFCDAGFTTVKSYRYWDQNKRELDFKNMLADLNDAPPGA 209
>AY339650-1|AAQ01663.1| 416|Drosophila melanogaster
aminotransferase protein.
Length = 416
Score = 214 bits (523), Expect = 6e-56
Identities = 96/177 (54%), Positives = 127/177 (71%)
Frame = +3
Query: 36 VSRFEGVEQGPPIEVFLLNKLFTDDTFKNKVNLGVGAYRDENGKPWVLPVVRKMEKQMAA 215
+S + V +GP IEVF L + F DD+ NKVNL VGAYR + G PWVLPVVRK E +A+
Sbjct: 1 MSIYADVPKGPAIEVFALTQAFKDDSNPNKVNLSVGAYRTDAGVPWVLPVVRKTEISIAS 60
Query: 216 DETLLHEYLPVLGMEQFSAASVSMLLGEDNPAIATGRAFGVQTLSGTGSLRVGAEFLNKH 395
DE + HEYLPV G+E F+ A+ ++LG D+PAI RAFGVQT+SGTG+LRV A+FL+
Sbjct: 61 DEQVNHEYLPVTGLETFTNAATELVLGADSPAIKENRAFGVQTISGTGALRVAADFLHTQ 120
Query: 396 LKYDTFYYSSPTWENHHLVFVNSGFTKPRTYRYWNAKTRSIDFNGLIEDLKNAPENA 566
L + YYS+PTWENHH +F ++GFT ++YRYW+ R +DF ++ DL +AP A
Sbjct: 121 LNRNVVYYSNPTWENHHKIFCDAGFTTVKSYRYWDQNKRELDFKNMLADLNDAPPGA 177
>AY061313-1|AAL28861.1| 416|Drosophila melanogaster LD23191p
protein.
Length = 416
Score = 214 bits (523), Expect = 6e-56
Identities = 96/177 (54%), Positives = 127/177 (71%)
Frame = +3
Query: 36 VSRFEGVEQGPPIEVFLLNKLFTDDTFKNKVNLGVGAYRDENGKPWVLPVVRKMEKQMAA 215
+S + V +GP IEVF L + F DD+ NKVNL VGAYR + G PWVLPVVRK E +A+
Sbjct: 1 MSIYADVPKGPAIEVFALTQAFKDDSNPNKVNLSVGAYRTDAGVPWVLPVVRKTEISIAS 60
Query: 216 DETLLHEYLPVLGMEQFSAASVSMLLGEDNPAIATGRAFGVQTLSGTGSLRVGAEFLNKH 395
DE + HEYLPV G+E F+ A+ ++LG D+PAI RAFGVQT+SGTG+LRV A+FL+
Sbjct: 61 DEQVNHEYLPVTGLETFTNAATELVLGADSPAIKENRAFGVQTISGTGALRVAADFLHTQ 120
Query: 396 LKYDTFYYSSPTWENHHLVFVNSGFTKPRTYRYWNAKTRSIDFNGLIEDLKNAPENA 566
L + YYS+PTWENHH +F ++GFT ++YRYW+ R +DF ++ DL +AP A
Sbjct: 121 LNRNVVYYSNPTWENHHKIFCDAGFTTVKSYRYWDQNKRELDFKNMLADLNDAPPGA 177
>AE013599-2195|AAF58059.1| 416|Drosophila melanogaster CG8430-PA,
isoform A protein.
Length = 416
Score = 214 bits (523), Expect = 6e-56
Identities = 96/177 (54%), Positives = 127/177 (71%)
Frame = +3
Query: 36 VSRFEGVEQGPPIEVFLLNKLFTDDTFKNKVNLGVGAYRDENGKPWVLPVVRKMEKQMAA 215
+S + V +GP IEVF L + F DD+ NKVNL VGAYR + G PWVLPVVRK E +A+
Sbjct: 1 MSIYADVPKGPAIEVFALTQAFKDDSNPNKVNLSVGAYRTDAGVPWVLPVVRKTEISIAS 60
Query: 216 DETLLHEYLPVLGMEQFSAASVSMLLGEDNPAIATGRAFGVQTLSGTGSLRVGAEFLNKH 395
DE + HEYLPV G+E F+ A+ ++LG D+PAI RAFGVQT+SGTG+LRV A+FL+
Sbjct: 61 DEQVNHEYLPVTGLETFTNAATELVLGADSPAIKENRAFGVQTISGTGALRVAADFLHTQ 120
Query: 396 LKYDTFYYSSPTWENHHLVFVNSGFTKPRTYRYWNAKTRSIDFNGLIEDLKNAPENA 566
L + YYS+PTWENHH +F ++GFT ++YRYW+ R +DF ++ DL +AP A
Sbjct: 121 LNRNVVYYSNPTWENHHKIFCDAGFTTVKSYRYWDQNKRELDFKNMLADLNDAPPGA 177
>AE013599-2194|AAM70954.1| 437|Drosophila melanogaster CG8430-PB,
isoform B protein.
Length = 437
Score = 214 bits (523), Expect = 6e-56
Identities = 96/177 (54%), Positives = 127/177 (71%)
Frame = +3
Query: 36 VSRFEGVEQGPPIEVFLLNKLFTDDTFKNKVNLGVGAYRDENGKPWVLPVVRKMEKQMAA 215
+S + V +GP IEVF L + F DD+ NKVNL VGAYR + G PWVLPVVRK E +A+
Sbjct: 22 MSIYADVPKGPAIEVFALTQAFKDDSNPNKVNLSVGAYRTDAGVPWVLPVVRKTEISIAS 81
Query: 216 DETLLHEYLPVLGMEQFSAASVSMLLGEDNPAIATGRAFGVQTLSGTGSLRVGAEFLNKH 395
DE + HEYLPV G+E F+ A+ ++LG D+PAI RAFGVQT+SGTG+LRV A+FL+
Sbjct: 82 DEQVNHEYLPVTGLETFTNAATELVLGADSPAIKENRAFGVQTISGTGALRVAADFLHTQ 141
Query: 396 LKYDTFYYSSPTWENHHLVFVNSGFTKPRTYRYWNAKTRSIDFNGLIEDLKNAPENA 566
L + YYS+PTWENHH +F ++GFT ++YRYW+ R +DF ++ DL +AP A
Sbjct: 142 LNRNVVYYSNPTWENHHKIFCDAGFTTVKSYRYWDQNKRELDFKNMLADLNDAPPGA 198
>AE014134-322|AAN10437.1| 431|Drosophila melanogaster CG4233-PB,
isoform B protein.
Length = 431
Score = 140 bits (338), Expect = 2e-33
Identities = 71/184 (38%), Positives = 112/184 (60%), Gaps = 1/184 (0%)
Frame = +3
Query: 18 C*YRKMVSRFEGVEQGPPIEVFLLNKLFTDDTFKNKVNLGVGAYRDENGKPWVLPVVRKM 197
C ++ + F V+ GPP + + + F DT K+NLG GAYRD+N +P+VLP VR+
Sbjct: 25 CRANRVSTWFSEVQMGPPDAILGVTEAFKKDTNPKKINLGAGAYRDDNTQPFVLPSVREA 84
Query: 198 EKQMAADETLLHEYLPVLGMEQFSAASVSMLLGEDNPAIATGRAFGVQTLSGTGSLRVGA 377
EK++ + +L EY ++G+ +F ++ + LG+ + +A Q++SGTG+LR+GA
Sbjct: 85 EKRVVS-RSLDKEYATIIGIPEFYNKAIELALGKGSKRLAAKHNVTAQSISGTGALRIGA 143
Query: 378 EFLNKHLKYDT-FYYSSPTWENHHLVFVNSGFTKPRTYRYWNAKTRSIDFNGLIEDLKNA 554
FL K + + Y SP+W NH +F ++G R YRY++ T ++DF GLIEDLK
Sbjct: 144 AFLAKFWQGNREIYIPSPSWGNHVAIFEHAGLPVNR-YRYYDKDTCALDFGGLIEDLKKI 202
Query: 555 PENA 566
PE +
Sbjct: 203 PEKS 206
>AE014134-321|AAF51320.1| 424|Drosophila melanogaster CG4233-PA,
isoform A protein.
Length = 424
Score = 139 bits (336), Expect = 3e-33
Identities = 70/175 (40%), Positives = 108/175 (61%), Gaps = 1/175 (0%)
Frame = +3
Query: 45 FEGVEQGPPIEVFLLNKLFTDDTFKNKVNLGVGAYRDENGKPWVLPVVRKMEKQMAADET 224
F V+ GPP + + + F DT K+NLG GAYRD+N +P+VLP VR+ EK++ + +
Sbjct: 27 FSEVQMGPPDAILGVTEAFKKDTNPKKINLGAGAYRDDNTQPFVLPSVREAEKRVVS-RS 85
Query: 225 LLHEYLPVLGMEQFSAASVSMLLGEDNPAIATGRAFGVQTLSGTGSLRVGAEFLNKHLKY 404
L EY ++G+ +F ++ + LG+ + +A Q++SGTG+LR+GA FL K +
Sbjct: 86 LDKEYATIIGIPEFYNKAIELALGKGSKRLAAKHNVTAQSISGTGALRIGAAFLAKFWQG 145
Query: 405 DT-FYYSSPTWENHHLVFVNSGFTKPRTYRYWNAKTRSIDFNGLIEDLKNAPENA 566
+ Y SP+W NH +F ++G R YRY++ T ++DF GLIEDLK PE +
Sbjct: 146 NREIYIPSPSWGNHVAIFEHAGLPVNR-YRYYDKDTCALDFGGLIEDLKKIPEKS 199
>AY069166-1|AAL39311.1| 393|Drosophila melanogaster GH20337p
protein.
Length = 393
Score = 135 bits (326), Expect = 5e-32
Identities = 68/169 (40%), Positives = 105/169 (62%), Gaps = 1/169 (0%)
Frame = +3
Query: 63 GPPIEVFLLNKLFTDDTFKNKVNLGVGAYRDENGKPWVLPVVRKMEKQMAADETLLHEYL 242
GPP + + + F DT K+NLG GAYRD+N +P+VLP VR+ EK++ + +L EY
Sbjct: 2 GPPDAILGVTEAFKKDTNPKKINLGAGAYRDDNTQPFVLPSVREAEKRVVS-RSLDKEYA 60
Query: 243 PVLGMEQFSAASVSMLLGEDNPAIATGRAFGVQTLSGTGSLRVGAEFLNKHLKYDT-FYY 419
++G+ +F ++ + LG+ + +A Q++SGTG+LR+GA FL K + + Y
Sbjct: 61 TIIGIPEFYNKAIELALGKGSKRLAAKHNVTAQSISGTGALRIGAAFLAKFWQGNREIYI 120
Query: 420 SSPTWENHHLVFVNSGFTKPRTYRYWNAKTRSIDFNGLIEDLKNAPENA 566
SP+W NH +F ++G R YRY++ T ++DF GLIEDLK PE +
Sbjct: 121 PSPSWGNHVAIFEHAGLPVNR-YRYYDKDTCALDFGGLIEDLKKIPEKS 168
>AE014134-323|AAN10438.1| 393|Drosophila melanogaster CG4233-PC,
isoform C protein.
Length = 393
Score = 135 bits (326), Expect = 5e-32
Identities = 68/169 (40%), Positives = 105/169 (62%), Gaps = 1/169 (0%)
Frame = +3
Query: 63 GPPIEVFLLNKLFTDDTFKNKVNLGVGAYRDENGKPWVLPVVRKMEKQMAADETLLHEYL 242
GPP + + + F DT K+NLG GAYRD+N +P+VLP VR+ EK++ + +L EY
Sbjct: 2 GPPDAILGVTEAFKKDTNPKKINLGAGAYRDDNTQPFVLPSVREAEKRVVS-RSLDKEYA 60
Query: 243 PVLGMEQFSAASVSMLLGEDNPAIATGRAFGVQTLSGTGSLRVGAEFLNKHLKYDT-FYY 419
++G+ +F ++ + LG+ + +A Q++SGTG+LR+GA FL K + + Y
Sbjct: 61 TIIGIPEFYNKAIELALGKGSKRLAAKHNVTAQSISGTGALRIGAAFLAKFWQGNREIYI 120
Query: 420 SSPTWENHHLVFVNSGFTKPRTYRYWNAKTRSIDFNGLIEDLKNAPENA 566
SP+W NH +F ++G R YRY++ T ++DF GLIEDLK PE +
Sbjct: 121 PSPSWGNHVAIFEHAGLPVNR-YRYYDKDTCALDFGGLIEDLKKIPEKS 168
>AY070873-1|AAL48495.1| 92|Drosophila melanogaster LD06106p
protein.
Length = 92
Score = 33.5 bits (73), Expect = 0.20
Identities = 18/71 (25%), Positives = 32/71 (45%)
Frame = -3
Query: 385 RNSAPTLRLPVPDRVCTPNARPVAIAGLSSPSNIDTDAAENCSIPSTGKYSCSNVSSAAI 206
R AP P+ + P R ++ S+ ++ ++ +C P+T CS+ SS I
Sbjct: 17 RTKAPRFSPPISSTLHRPRRRNYRPCPITITSHFNSSSSNSCCCPTTSAMRCSSSSSNNI 76
Query: 205 CFSILRTTGNT 173
S + GN+
Sbjct: 77 SNSSSKGRGNS 87
>AE013599-3433|AAF46878.2| 147|Drosophila melanogaster CG30196-PA
protein.
Length = 147
Score = 33.1 bits (72), Expect = 0.27
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +1
Query: 100 LQTIHLKIKLIWVLVHIEMRMESHGCCLSSVRWRNRWQLMKHYCTN 237
LQT H+K + + VL I + CC + +RW+ R + HYC++
Sbjct: 40 LQTTHVKSEAVTVLQKIACSLNVLLCC-NPIRWKGRHD-VNHYCSS 83
>AE013599-3144|AAM70856.1| 980|Drosophila melanogaster CG30389-PC,
isoform C protein.
Length = 980
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = -3
Query: 343 VCTPNARPVAIAGLSSPSNIDTDAAENCSIPSTGKYSCSNVSSAA 209
+ +A A+A +S S+ T + + S STGK S S+ +SAA
Sbjct: 321 ITASSATGAALAAAASASSASTTSGSSSSSASTGKQSSSSAASAA 365
>AE013599-3143|AAF46685.2| 980|Drosophila melanogaster CG30389-PA,
isoform A protein.
Length = 980
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = -3
Query: 343 VCTPNARPVAIAGLSSPSNIDTDAAENCSIPSTGKYSCSNVSSAA 209
+ +A A+A +S S+ T + + S STGK S S+ +SAA
Sbjct: 321 ITASSATGAALAAAASASSASTTSGSSSSSASTGKQSSSSAASAA 365
>BT028865-1|ABI34246.2| 198|Drosophila melanogaster RT01153p
protein.
Length = 198
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +3
Query: 435 ENHHLVFVNSGFTKPRTYRYWNAKTRSIDFNGLIEDLKNAPENA 566
+ HHL G + R+ RYWN + RS ++ L + ++ +A
Sbjct: 78 QQHHLQANPLGKNQGRSPRYWNKQQRSKPYDKLSTSMSSSTSSA 121
>BT028832-1|ABI34213.2| 198|Drosophila melanogaster RT01053p
protein.
Length = 198
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +3
Query: 435 ENHHLVFVNSGFTKPRTYRYWNAKTRSIDFNGLIEDLKNAPENA 566
+ HHL G + R+ RYWN + RS ++ L + ++ +A
Sbjct: 78 QQHHLQANPLGKNQGRSPRYWNKQQRSKPYDKLSTSMSSSTSSA 121
>AF166113-1|AAD45410.1| 198|Drosophila melanogaster basic
helix-loop-helix transcriptionfactor protein.
Length = 198
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +3
Query: 435 ENHHLVFVNSGFTKPRTYRYWNAKTRSIDFNGLIEDLKNAPENA 566
+ HHL G + R+ RYWN + RS ++ L + ++ +A
Sbjct: 78 QQHHLQANPLGKNQGRSPRYWNKQQRSKPYDKLSTSMSSSTSSA 121
>AE014134-2944|AAF53678.1| 198|Drosophila melanogaster CG10393-PA
protein.
Length = 198
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +3
Query: 435 ENHHLVFVNSGFTKPRTYRYWNAKTRSIDFNGLIEDLKNAPENA 566
+ HHL G + R+ RYWN + RS ++ L + ++ +A
Sbjct: 78 QQHHLQANPLGKNQGRSPRYWNKQQRSKPYDKLSTSMSSSTSSA 121
>AE014134-490|AAF51194.1| 375|Drosophila melanogaster CG3117-PA
protein.
Length = 375
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -3
Query: 388 LRNSAPTLRLPVPDRVCTPNARPVAIAGLSSPSNIDTD 275
LR + T+RLP+PD+ T + R +AG S+ D D
Sbjct: 222 LRANIQTIRLPIPDK--TFDRRICTVAGWGMRSSTDVD 257
>AE014134-2738|AAF53546.3| 1700|Drosophila melanogaster CG31738-PB,
isoform B protein.
Length = 1700
Score = 25.4 bits (53), Expect(2) = 8.1
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -1
Query: 207 SVSPSYGRQATPMAFHSHLYMHQH 136
SV + G AT A H+H + H H
Sbjct: 380 SVGAAQGAPATATATHTHAHSHSH 403
Score = 21.0 bits (42), Expect(2) = 8.1
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = -1
Query: 162 HSHLYMHQHP 133
HSH + H HP
Sbjct: 403 HSHAHSHTHP 412
>AY094813-1|AAM11166.1| 1413|Drosophila melanogaster LD30602p
protein.
Length = 1413
Score = 25.4 bits (53), Expect(2) = 8.2
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -1
Query: 207 SVSPSYGRQATPMAFHSHLYMHQH 136
SV + G AT A H+H + H H
Sbjct: 93 SVGAAQGAPATATATHTHAHSHSH 116
Score = 21.0 bits (42), Expect(2) = 8.2
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = -1
Query: 162 HSHLYMHQHP 133
HSH + H HP
Sbjct: 116 HSHAHSHTHP 125
>AE014134-2739|AAF53547.2| 1413|Drosophila melanogaster CG31738-PA,
isoform A protein.
Length = 1413
Score = 25.4 bits (53), Expect(2) = 8.2
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -1
Query: 207 SVSPSYGRQATPMAFHSHLYMHQH 136
SV + G AT A H+H + H H
Sbjct: 93 SVGAAQGAPATATATHTHAHSHSH 116
Score = 21.0 bits (42), Expect(2) = 8.2
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = -1
Query: 162 HSHLYMHQHP 133
HSH + H HP
Sbjct: 116 HSHAHSHTHP 125
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,303,616
Number of Sequences: 53049
Number of extensions: 635227
Number of successful extensions: 2631
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 2493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2623
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2213979693
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -