Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_F19
(567 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g11520.1 68418.m01344 aspartate aminotransferase, chloroplast... 162 2e-40
At5g19550.1 68418.m02328 aspartate aminotransferase, cytoplasmic... 161 4e-40
At1g62800.2 68414.m07090 aspartate aminotransferase, cytoplasmic... 146 1e-35
At1g62800.1 68414.m07089 aspartate aminotransferase, cytoplasmic... 144 5e-35
At4g31990.2 68417.m04554 aspartate aminotransferase, chloroplast... 137 6e-33
At4g31990.1 68417.m04553 aspartate aminotransferase, chloroplast... 137 6e-33
At2g30970.1 68415.m03777 aspartate aminotransferase, mitochondri... 134 3e-32
At3g13150.1 68416.m01645 pentatricopeptide (PPR) repeat-containi... 28 3.8
At3g12220.1 68416.m01525 serine carboxypeptidase S10 family prot... 28 5.0
At2g17260.1 68415.m01993 glutamate receptor family protein (GLR3... 28 5.0
>At5g11520.1 68418.m01344 aspartate aminotransferase, chloroplast /
transaminase A (ASP3) (YLS4) identical to SP|P46644
Aspartate aminotransferase, chloroplast precursor (EC
2.6.1.1) (Transaminase A) {Arabidopsis thaliana};
identical to cDNA YLS4 mRNA for aspartate
aminotransferase (ASP3), partial cds GI:13122285
Length = 449
Score = 162 bits (393), Expect = 2e-40
Identities = 80/169 (47%), Positives = 106/169 (62%)
Frame = +3
Query: 39 SRFEGVEQGPPIEVFLLNKLFTDDTFKNKVNLGVGAYRDENGKPWVLPVVRKMEKQMAAD 218
S F + Q P + + + D K+NLGVGAYR E GKP VL VVRK E+Q+ D
Sbjct: 47 SVFSHLVQAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLIND 106
Query: 219 ETLLHEYLPVLGMEQFSAASVSMLLGEDNPAIATGRAFGVQTLSGTGSLRVGAEFLNKHL 398
T + EYLP++G+ +F+ S ++LG D+PAI R V+ LSGTGSLRVG EFL KH
Sbjct: 107 RTRIKEYLPIVGLVEFNKLSAKLILGADSPAIRENRITTVECLSGTGSLRVGGEFLAKHY 166
Query: 399 KYDTFYYSSPTWENHHLVFVNSGFTKPRTYRYWNAKTRSIDFNGLIEDL 545
T Y + PTW NH +F +G T +TYRY++ TR ++F GL+EDL
Sbjct: 167 HQKTIYITQPTWGNHPKIFTLAGLT-VKTYRYYDPATRGLNFQGLLEDL 214
>At5g19550.1 68418.m02328 aspartate aminotransferase, cytoplasmic
isozyme 1 / transaminase A (ASP2) identical to SP|P46645
Aspartate aminotransferase, cytoplasmic isozyme 1 (EC
2.6.1.1) (Transaminase A) {Arabidopsis thaliana}
Length = 405
Score = 161 bits (390), Expect = 4e-40
Identities = 81/178 (45%), Positives = 106/178 (59%)
Frame = +3
Query: 33 MVSRFEGVEQGPPIEVFLLNKLFTDDTFKNKVNLGVGAYRDENGKPWVLPVVRKMEKQMA 212
M S F V + P + + + +D K+NLGVGAYR E GKP VL VVRK E+Q+
Sbjct: 1 MDSVFSNVARAPEDPILGVTVAYNNDPSPVKINLGVGAYRTEEGKPLVLDVVRKAEQQLV 60
Query: 213 ADETLLHEYLPVLGMEQFSAASVSMLLGEDNPAIATGRAFGVQTLSGTGSLRVGAEFLNK 392
D + + EY+P++G+ F+ S ++LG D+PAI R VQ LSGTGSLRVGAEFL
Sbjct: 61 NDPSRVKEYIPIVGISDFNKLSAKLILGADSPAITESRVTTVQCLSGTGSLRVGAEFLKT 120
Query: 393 HLKYDTFYYSSPTWENHHLVFVNSGFTKPRTYRYWNAKTRSIDFNGLIEDLKNAPENA 566
H Y PTW NH VF +G + +RY++ TR +DF GL+EDL AP A
Sbjct: 121 HYHQSVIYIPKPTWGNHPKVFNLAGLS-VEYFRYYDPATRGLDFKGLLEDLGAAPSGA 177
>At1g62800.2 68414.m07090 aspartate aminotransferase, cytoplasmic
isozyme 2 / transaminase A (ASP4) identical to aspartate
aminotransferase, cytoplasmic isozyme 2 SP:P46646
[Arabidopsis thaliana]
Length = 405
Score = 146 bits (353), Expect = 1e-35
Identities = 71/154 (46%), Positives = 98/154 (63%)
Frame = +3
Query: 105 DDTFKNKVNLGVGAYRDENGKPWVLPVVRKMEKQMAADETLLHEYLPVLGMEQFSAASVS 284
DD K+NL G YR E GKP VL VVR+ E+Q+A D + EYLP+ G+ +F+ S
Sbjct: 25 DDPSPVKLNLSAGTYRTEEGKPLVLDVVRRAEQQLANDLSRDKEYLPLNGLPEFNKLSTK 84
Query: 285 MLLGEDNPAIATGRAFGVQTLSGTGSLRVGAEFLNKHLKYDTFYYSSPTWENHHLVFVNS 464
++LG+D+PA+ R Q LSGTGSLRVGAEFL H K + +PTW NH +F +
Sbjct: 85 LILGDDSPALKENRVVTTQCLSGTGSLRVGAEFLATHNKESVIFVPNPTWGNHPRIFTLA 144
Query: 465 GFTKPRTYRYWNAKTRSIDFNGLIEDLKNAPENA 566
G + + +RY++ K+R +DF G++EDL AP A
Sbjct: 145 GLS-VQYFRYYDPKSRGLDFKGMLEDLGAAPPGA 177
>At1g62800.1 68414.m07089 aspartate aminotransferase, cytoplasmic
isozyme 2 / transaminase A (ASP4) identical to aspartate
aminotransferase, cytoplasmic isozyme 2 SP:P46646
[Arabidopsis thaliana]
Length = 403
Score = 144 bits (348), Expect = 5e-35
Identities = 72/154 (46%), Positives = 98/154 (63%)
Frame = +3
Query: 105 DDTFKNKVNLGVGAYRDENGKPWVLPVVRKMEKQMAADETLLHEYLPVLGMEQFSAASVS 284
DD K+NL G YR E GKP VL VVR+ E+Q+A D L EYLP+ G+ +F+ S
Sbjct: 25 DDPSPVKLNLSAGTYRTEEGKPLVLDVVRRAEQQLAND--LDKEYLPLNGLPEFNKLSTK 82
Query: 285 MLLGEDNPAIATGRAFGVQTLSGTGSLRVGAEFLNKHLKYDTFYYSSPTWENHHLVFVNS 464
++LG+D+PA+ R Q LSGTGSLRVGAEFL H K + +PTW NH +F +
Sbjct: 83 LILGDDSPALKENRVVTTQCLSGTGSLRVGAEFLATHNKESVIFVPNPTWGNHPRIFTLA 142
Query: 465 GFTKPRTYRYWNAKTRSIDFNGLIEDLKNAPENA 566
G + + +RY++ K+R +DF G++EDL AP A
Sbjct: 143 GLS-VQYFRYYDPKSRGLDFKGMLEDLGAAPPGA 175
>At4g31990.2 68417.m04554 aspartate aminotransferase, chloroplast /
transaminase A (ASP5) (AAT1) nearly identical to
SP|P46248 Aspartate aminotransferase, chloroplast
precursor (EC 2.6.1.1) (Transaminase A) {Arabidopsis
thaliana}
Length = 453
Score = 137 bits (331), Expect = 6e-33
Identities = 73/176 (41%), Positives = 101/176 (57%)
Frame = +3
Query: 39 SRFEGVEQGPPIEVFLLNKLFTDDTFKNKVNLGVGAYRDENGKPWVLPVVRKMEKQMAAD 218
SRFEG+ PP + +++ F DT K+NLGVGAYR E +P+VL VV+K E M +
Sbjct: 51 SRFEGITMAPPDPILGVSEAFKADTNGMKLNLGVGAYRTEELQPYVLNVVKKAENLML-E 109
Query: 219 ETLLHEYLPVLGMEQFSAASVSMLLGEDNPAIATGRAFGVQTLSGTGSLRVGAEFLNKHL 398
EYLP+ G+ F+ A+ +L G +P I R +Q LSGTGSLR+ A + ++
Sbjct: 110 RGDNKEYLPIEGLAAFNKATAELLFGAGHPVIKEQRVATIQGLSGTGSLRLAAALIERYF 169
Query: 399 KYDTFYYSSPTWENHHLVFVNSGFTKPRTYRYWNAKTRSIDFNGLIEDLKNAPENA 566
SSPTW NH +F N YRY++ KT +DF G+I D+K APE +
Sbjct: 170 PGAKVVISSPTWGNHKNIF-NDAKVPWSEYRYYDPKTIGLDFEGMIADIKEAPEGS 224
>At4g31990.1 68417.m04553 aspartate aminotransferase, chloroplast /
transaminase A (ASP5) (AAT1) nearly identical to
SP|P46248 Aspartate aminotransferase, chloroplast
precursor (EC 2.6.1.1) (Transaminase A) {Arabidopsis
thaliana}
Length = 453
Score = 137 bits (331), Expect = 6e-33
Identities = 73/176 (41%), Positives = 101/176 (57%)
Frame = +3
Query: 39 SRFEGVEQGPPIEVFLLNKLFTDDTFKNKVNLGVGAYRDENGKPWVLPVVRKMEKQMAAD 218
SRFEG+ PP + +++ F DT K+NLGVGAYR E +P+VL VV+K E M +
Sbjct: 51 SRFEGITMAPPDPILGVSEAFKADTNGMKLNLGVGAYRTEELQPYVLNVVKKAENLML-E 109
Query: 219 ETLLHEYLPVLGMEQFSAASVSMLLGEDNPAIATGRAFGVQTLSGTGSLRVGAEFLNKHL 398
EYLP+ G+ F+ A+ +L G +P I R +Q LSGTGSLR+ A + ++
Sbjct: 110 RGDNKEYLPIEGLAAFNKATAELLFGAGHPVIKEQRVATIQGLSGTGSLRLAAALIERYF 169
Query: 399 KYDTFYYSSPTWENHHLVFVNSGFTKPRTYRYWNAKTRSIDFNGLIEDLKNAPENA 566
SSPTW NH +F N YRY++ KT +DF G+I D+K APE +
Sbjct: 170 PGAKVVISSPTWGNHKNIF-NDAKVPWSEYRYYDPKTIGLDFEGMIADIKEAPEGS 224
>At2g30970.1 68415.m03777 aspartate aminotransferase, mitochondrial
/ transaminase A (ASP1) identical to SP|P46643 Aspartate
aminotransferase, mitochondrial precursor (EC 2.6.1.1)
(Transaminase A) {Arabidopsis thaliana}
Length = 430
Score = 134 bits (325), Expect = 3e-32
Identities = 70/186 (37%), Positives = 109/186 (58%)
Frame = +3
Query: 9 GHTC*YRKMVSRFEGVEQGPPIEVFLLNKLFTDDTFKNKVNLGVGAYRDENGKPWVLPVV 188
GH R M S ++ VE P + + + F D KVN+GVGAYRD+NGKP VL V
Sbjct: 21 GHFGGLRSMSSWWKSVEPAPKDPILGVTEAFLADPSPEKVNVGVGAYRDDNGKPVVLECV 80
Query: 189 RKMEKQMAADETLLHEYLPVLGMEQFSAASVSMLLGEDNPAIATGRAFGVQTLSGTGSLR 368
R+ EK++A + EYLP+ G + ++ + G+++ I R VQTLSGTG+ R
Sbjct: 81 REAEKRLAGSTFM--EYLPMGGSAKMVDLTLKLAYGDNSEFIKDKRIAAVQTLSGTGACR 138
Query: 369 VGAEFLNKHLKYDTFYYSSPTWENHHLVFVNSGFTKPRTYRYWNAKTRSIDFNGLIEDLK 548
+ A+F + Y PTW NHH ++ ++ + +TY Y++ +T+ +DF+ L++D+K
Sbjct: 139 LFADFQKRFSPGSQIYIPVPTWSNHHNIWKDAQVPQ-KTYHYYHPETKGLDFSALMDDVK 197
Query: 549 NAPENA 566
NAPE +
Sbjct: 198 NAPEGS 203
>At3g13150.1 68416.m01645 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 551
Score = 28.3 bits (60), Expect = 3.8
Identities = 29/119 (24%), Positives = 57/119 (47%), Gaps = 1/119 (0%)
Frame = -3
Query: 382 NSAPTLRLPVPDRVCTPN-ARPVAIAGLSSPSNIDTDAAENCSIPSTGKYSCSNVSSAAI 206
+SA T PV T + +++A SS S+ D+ + ++ S S+ S S+VSS+
Sbjct: 420 SSAKTTSTPVSSSPDTSSFLLSLSLAADSSSSDSDSSSPDSSSSVSSSPDSSSSVSSSPD 479
Query: 205 CFSILRTTGNTHGFPFSSLYAPTPKLTLFLNVSSVNSLFSKKTSIGGPCSTPSKRETIF 29
+S ++ ++ SSL++ + + + + S NS+ S G S+ ++F
Sbjct: 480 SYSSFSSSPDSSSSVSSSLFSSSRENSSSPDYS--NSVSSSLDYSGSVSSSSDYSSSVF 536
>At3g12220.1 68416.m01525 serine carboxypeptidase S10 family protein
contains Pfam profile: PF00450 serine carboxypeptidase;
similar to serine carboxypeptidase I precursor
(SP:P37890) [Oryza sativa]
Length = 435
Score = 27.9 bits (59), Expect = 5.0
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Frame = +3
Query: 240 LPVLGMEQFSAASVSMLLGEDNPAIATGRAFGVQTL----SGTGSLRVGAEFLNKHLKYD 407
+P L +S V+ ++ D P + TG ++ L S TGS + EFL K L
Sbjct: 106 IPTLVSTTYSWTKVANIIYLDQP-VGTGFSYSRNPLADIPSDTGSAKRVDEFLRKWLTKH 164
Query: 408 TFYYSSP 428
Y+S+P
Sbjct: 165 PEYFSNP 171
>At2g17260.1 68415.m01993 glutamate receptor family protein (GLR3.1)
(GLR2) identical to putative glutamate receptor GLR2
[Arabidopsis thaliana] gi|4185740|gb|AAD09174; plant
glutamate receptor family, PMID:11379626
Length = 951
Score = 27.9 bits (59), Expect = 5.0
Identities = 10/35 (28%), Positives = 16/35 (45%)
Frame = +3
Query: 441 HHLVFVNSGFTKPRTYRYWNAKTRSIDFNGLIEDL 545
H +F G T P N T +DF+ ++ D+
Sbjct: 541 HEFIFFGDGLTNPNYNELVNKVTTGVDFDAVVGDI 575
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,274,317
Number of Sequences: 28952
Number of extensions: 300024
Number of successful extensions: 949
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 904
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 938
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1092379416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -