Samia BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_F18
         (441 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0582 + 17528335-17529790,17529913-17531651,17531814-175320...    29   1.3  
04_04_0961 + 29715938-29716034,29716918-29717133,29717438-297177...    29   2.2  
03_04_0174 - 18044516-18046327                                         27   6.7  
03_05_0944 + 29046793-29046922,29048091-29048464,29048556-290486...    27   8.8  
01_06_1699 - 39269477-39269574,39269690-39269929,39270029-392700...    27   8.8  

>04_03_0582 + 17528335-17529790,17529913-17531651,17531814-17532035,
            17532062-17533525
          Length = 1626

 Score = 29.5 bits (63), Expect = 1.3
 Identities = 16/50 (32%), Positives = 28/50 (56%)
 Frame = +2

Query: 179  FIRSENIH*KYHRPLYIDKRYLVITSVKSTLFFFSLNPLISVILGIFMYS 328
            F+R+E +H K   P+ + KR+  I S   +LF    NP +++  G ++ S
Sbjct: 1552 FVRNEVMHNKPAPPMEVSKRF--IESYVDSLFMIRQNPQVNLEKGKYVVS 1599


>04_04_0961 +
           29715938-29716034,29716918-29717133,29717438-29717776,
           29718247-29719274,29719465-29719551,29719636-29720043,
           29720394-29720558,29720742-29721036,29721131-29721345,
           29721838-29722143,29722474-29722537,29722644-29722883,
           29722959-29723062
          Length = 1187

 Score = 28.7 bits (61), Expect = 2.2
 Identities = 13/24 (54%), Positives = 16/24 (66%), Gaps = 3/24 (12%)
 Frame = -1

Query: 369 WRICHAANKMI---RILEYINIPN 307
           W IC+  NKMI   RIL+Y  IP+
Sbjct: 900 WNICNTENKMISVERILQYSRIPS 923


>03_04_0174 - 18044516-18046327
          Length = 603

 Score = 27.1 bits (57), Expect = 6.7
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = -1

Query: 438 HTHTHIYIRHGTHIHSSYNN 379
           HTH H Y  H    HS YNN
Sbjct: 46  HTHNHTYYHHS---HSHYNN 62


>03_05_0944 +
           29046793-29046922,29048091-29048464,29048556-29048687,
           29048829-29049210,29049370-29049513,29049593-29049777,
           29049925-29050051,29050603-29050676,29051071-29051147,
           29051256-29051292,29051453-29051619,29051800-29051983,
           29052053-29052130,29052451-29052570,29052648-29052707,
           29053057-29053179,29053848-29053941,29054019-29054197,
           29054737-29055039,29055373-29055474,29055553-29055693,
           29055831-29055995,29056168-29056344,29056432-29056554,
           29057787-29057867,29057983-29058099,29058214-29058386,
           29058846-29058923,29058994-29059141,29059755-29059877,
           29060015-29060071,29060145-29060255,29060382-29060573,
           29060690-29060863,29061263-29061373,29061462-29061531,
           29061734-29061812,29061898-29062000,29062086-29062256,
           29062348-29062470,29062548-29062661,29062935-29063041,
           29063117-29063168,29063245-29063351,29063589-29063703,
           29063819-29063929,29064016-29064153,29064230-29064352,
           29064535-29064606,29064774-29064886,29066780-29067110,
           29067199-29067381,29068669-29068863,29068943-29069110,
           29069208-29069340,29069511-29069595,29069726-29069765
          Length = 2591

 Score = 26.6 bits (56), Expect = 8.8
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -1

Query: 324 YINIPNITLIRGFKEKKNKVLFT 256
           +I +P++TL  GF E   K+L+T
Sbjct: 739 FIGLPDLTLHDGFSENDIKILYT 761


>01_06_1699 - 39269477-39269574,39269690-39269929,39270029-39270092,
            39270251-39270771,39271032-39271326,39271400-39271564,
            39271650-39272237,39272617-39272703,39272982-39274429,
            39274515-39275015,39275574-39275678,39276095-39276143
          Length = 1386

 Score = 26.6 bits (56), Expect = 8.8
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -1

Query: 369  WRICHAANKMIRILEYINIPNIT 301
            W +C+  NKMI +   +   NIT
Sbjct: 1101 WNLCNVENKMISVERILQFSNIT 1123


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,223,971
Number of Sequences: 37544
Number of extensions: 188693
Number of successful extensions: 338
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 325
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 338
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 835800280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)