Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_F18
         (441 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    23   1.1  
DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.               22   2.6  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   3.4  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   3.4  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    21   7.9  

>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +3

Query: 96  MLNIARLLPFIYIYINWTRKMFVFCHTC 179
           MLN+  + P +++ IN      V C  C
Sbjct: 1   MLNMKNIFPVLFVIINVLLHGQVICFVC 28


>DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.
          Length = 152

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = +2

Query: 158 VCILSYMFIRSENI 199
           +CI+SYM +R ++I
Sbjct: 11  LCIVSYMMVRCDDI 24


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -1

Query: 426 HIYIRHGTHIHSSYNNVKS 370
           H    HG HI+SS ++V+S
Sbjct: 806 HQQSHHGLHINSSPSSVQS 824


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = +3

Query: 378 RYYSYCVYVCHVLYICVCVC 437
           RY ++C  +CH      C C
Sbjct: 738 RYEAHCFALCHCCDFDACDC 757


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +2

Query: 224 YIDKRYLVITSVKSTLFFFSL 286
           YID  ++VI   ++  +FF+L
Sbjct: 218 YIDITFVVIIRRRTLYYFFNL 238


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,415
Number of Sequences: 438
Number of extensions: 3071
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11450997
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)