Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_F16
(423 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000262-7|AAN60523.1| 544|Caenorhabditis elegans Hypothetical ... 29 1.8
Z49126-7|CAD56566.1| 392|Caenorhabditis elegans Hypothetical pr... 27 4.2
Z49126-6|CAA88942.2| 530|Caenorhabditis elegans Hypothetical pr... 27 4.2
Z49066-3|CAD56555.1| 392|Caenorhabditis elegans Hypothetical pr... 27 4.2
Z49066-2|CAD56554.1| 530|Caenorhabditis elegans Hypothetical pr... 27 4.2
Z48583-4|CAN99691.1| 3394|Caenorhabditis elegans Hypothetical pr... 27 4.2
Z48583-3|CAA88472.1| 3396|Caenorhabditis elegans Hypothetical pr... 27 4.2
Z66516-4|CAA91359.2| 500|Caenorhabditis elegans Hypothetical pr... 27 7.3
U40801-5|AAO91727.1| 777|Caenorhabditis elegans Hypothetical pr... 27 7.3
U40801-4|AAO91728.1| 873|Caenorhabditis elegans Hypothetical pr... 27 7.3
U40801-3|AAV34792.1| 1134|Caenorhabditis elegans Hypothetical pr... 27 7.3
U28735-8|AAF99957.2| 434|Caenorhabditis elegans Acetylcholine r... 27 7.3
L23645-8|AAK26133.1| 282|Caenorhabditis elegans Peroxisome asse... 27 7.3
AY519852-1|AAR89633.1| 434|Caenorhabditis elegans acetylcholine... 27 7.3
U53180-6|AAA96288.1| 202|Caenorhabditis elegans Hypothetical pr... 26 9.7
>AF000262-7|AAN60523.1| 544|Caenorhabditis elegans Hypothetical
protein C48E7.2 protein.
Length = 544
Score = 28.7 bits (61), Expect = 1.8
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +3
Query: 81 YWRVNYDRFHQDFRDEIMI 137
YWR+N+ RF+ RDE++I
Sbjct: 215 YWRINWIRFNGYLRDELII 233
>Z49126-7|CAD56566.1| 392|Caenorhabditis elegans Hypothetical
protein DH11.5b protein.
Length = 392
Score = 27.5 bits (58), Expect = 4.2
Identities = 13/34 (38%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Frame = -1
Query: 246 VWGSTPAPRPLTSDTSVAGGAALT-HPHFHQSFA 148
+WG T P PL T + G HPH H A
Sbjct: 1 MWGDTEKPDPLLLGTHIGDGRHHPHHPHHHAHHA 34
>Z49126-6|CAA88942.2| 530|Caenorhabditis elegans Hypothetical
protein DH11.5a protein.
Length = 530
Score = 27.5 bits (58), Expect = 4.2
Identities = 13/34 (38%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Frame = -1
Query: 246 VWGSTPAPRPLTSDTSVAGGAALT-HPHFHQSFA 148
+WG T P PL T + G HPH H A
Sbjct: 1 MWGDTEKPDPLLLGTHIGDGRHHPHHPHHHAHHA 34
>Z49066-3|CAD56555.1| 392|Caenorhabditis elegans Hypothetical
protein DH11.5b protein.
Length = 392
Score = 27.5 bits (58), Expect = 4.2
Identities = 13/34 (38%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Frame = -1
Query: 246 VWGSTPAPRPLTSDTSVAGGAALT-HPHFHQSFA 148
+WG T P PL T + G HPH H A
Sbjct: 1 MWGDTEKPDPLLLGTHIGDGRHHPHHPHHHAHHA 34
>Z49066-2|CAD56554.1| 530|Caenorhabditis elegans Hypothetical
protein DH11.5a protein.
Length = 530
Score = 27.5 bits (58), Expect = 4.2
Identities = 13/34 (38%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Frame = -1
Query: 246 VWGSTPAPRPLTSDTSVAGGAALT-HPHFHQSFA 148
+WG T P PL T + G HPH H A
Sbjct: 1 MWGDTEKPDPLLLGTHIGDGRHHPHHPHHHAHHA 34
>Z48583-4|CAN99691.1| 3394|Caenorhabditis elegans Hypothetical protein
F54B3.1b protein.
Length = 3394
Score = 27.5 bits (58), Expect = 4.2
Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +3
Query: 3 IVPELDARVLLQVMNTGNLAEANDTIYWRVNYDR-FHQDF 119
+VP + RV + + G + +D +YW DR F +DF
Sbjct: 3311 VVPSIKIRVHMDDVGGGGIGCDDDRLYWPPTQDREFIEDF 3350
>Z48583-3|CAA88472.1| 3396|Caenorhabditis elegans Hypothetical protein
F54B3.1a protein.
Length = 3396
Score = 27.5 bits (58), Expect = 4.2
Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +3
Query: 3 IVPELDARVLLQVMNTGNLAEANDTIYWRVNYDR-FHQDF 119
+VP + RV + + G + +D +YW DR F +DF
Sbjct: 3313 VVPSIKIRVHMDDVGGGGIGCDDDRLYWPPTQDREFIEDF 3352
>Z66516-4|CAA91359.2| 500|Caenorhabditis elegans Hypothetical
protein W03C9.6 protein.
Length = 500
Score = 26.6 bits (56), Expect = 7.3
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 2/37 (5%)
Frame = +3
Query: 189 LLQQMYLTSAAWAPESNPTPAF-TLRDC-CRRAATEW 293
+ MY+ + W P SNP P + L D C W
Sbjct: 360 IFMSMYVFTYPWTPVSNPVPPYNALADVGCNSTTYSW 396
>U40801-5|AAO91727.1| 777|Caenorhabditis elegans Hypothetical
protein F28E10.1b protein.
Length = 777
Score = 26.6 bits (56), Expect = 7.3
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +3
Query: 138 KAISRRIDENAGELMRHLLQQMYLTSAAWAPESNPTP 248
K I +RID+NA +++ ++ TS P+ +PTP
Sbjct: 53 KQIPKRIDQNANRVIKSSSMEVPSTSKVCIPQ-DPTP 88
>U40801-4|AAO91728.1| 873|Caenorhabditis elegans Hypothetical
protein F28E10.1c protein.
Length = 873
Score = 26.6 bits (56), Expect = 7.3
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +3
Query: 138 KAISRRIDENAGELMRHLLQQMYLTSAAWAPESNPTP 248
K I +RID+NA +++ ++ TS P+ +PTP
Sbjct: 149 KQIPKRIDQNANRVIKSSSMEVPSTSKVCIPQ-DPTP 184
>U40801-3|AAV34792.1| 1134|Caenorhabditis elegans Hypothetical
protein F28E10.1a protein.
Length = 1134
Score = 26.6 bits (56), Expect = 7.3
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +3
Query: 138 KAISRRIDENAGELMRHLLQQMYLTSAAWAPESNPTP 248
K I +RID+NA +++ ++ TS P+ +PTP
Sbjct: 195 KQIPKRIDQNANRVIKSSSMEVPSTSKVCIPQ-DPTP 230
>U28735-8|AAF99957.2| 434|Caenorhabditis elegans Acetylcholine
receptor protein 22 protein.
Length = 434
Score = 26.6 bits (56), Expect = 7.3
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +3
Query: 123 DEIMIKAISRRIDENAGELMRHLLQQMY 206
+++ KA+ ++ D N EL +HLL Y
Sbjct: 21 EKVKNKAVEKKDDRNERELAKHLLDDYY 48
>L23645-8|AAK26133.1| 282|Caenorhabditis elegans Peroxisome
assembly factor protein19 protein.
Length = 282
Score = 26.6 bits (56), Expect = 7.3
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = +3
Query: 291 WPLLNQYMDQYLKLLEENGCGFVRRTGDAGGGQLVVRCKHAAE 419
+P L + D Y K LE+NG G T + Q V K E
Sbjct: 158 YPPLKEIFDNYPKYLEDNGAGLDAETKERYEKQFEVLGKICTE 200
>AY519852-1|AAR89633.1| 434|Caenorhabditis elegans acetylcholine
receptor (51.1 kD)(acr-22) protein.
Length = 434
Score = 26.6 bits (56), Expect = 7.3
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +3
Query: 123 DEIMIKAISRRIDENAGELMRHLLQQMY 206
+++ KA+ ++ D N EL +HLL Y
Sbjct: 21 EKVKNKAVEKKDDRNERELAKHLLDDYY 48
>U53180-6|AAA96288.1| 202|Caenorhabditis elegans Hypothetical
protein D1014.4 protein.
Length = 202
Score = 26.2 bits (55), Expect = 9.7
Identities = 11/38 (28%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +3
Query: 51 GNLAEANDTI-YWRVNYDRFHQDF-RDEIMIKAISRRI 158
GN E + + YW+ YD ++D+ R +I +++ R+
Sbjct: 2 GNEEEEDSNVRYWKTKYDHLNEDYERIKIRTESLENRL 39
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,006,193
Number of Sequences: 27780
Number of extensions: 204312
Number of successful extensions: 826
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 761
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 826
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 692685370
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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