Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_F16
         (423 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    21   5.7  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   7.5  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    20   10.0 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             20   10.0 

>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +3

Query: 90  VNYDRFHQDFRDEIMIKAISR 152
           V Y+R    F  ++ +KA+S+
Sbjct: 292 VQYERVQDVFDSQLTVKAVSK 312


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = -3

Query: 394 TSCPPPASPVRRTKPQPFSSR 332
           T+CPP  +      PQP + +
Sbjct: 211 TACPPTLACPLNPNPQPLTGQ 231


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 20.2 bits (40), Expect = 10.0
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = +2

Query: 248 RVHTARLLPPSCNGMAPIKPVHG 316
           RVH +       NG   ++P HG
Sbjct: 407 RVHISNATLSFLNGEFEVEPAHG 429


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 20.2 bits (40), Expect = 10.0
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +3

Query: 156 IDENAGELMRHLLQQMYLTSAAW 224
           ++ + G+ +R LLQ+   T A W
Sbjct: 730 LEGSGGDSLRTLLQRGQETGAEW 752


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,049
Number of Sequences: 438
Number of extensions: 2589
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10873896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)