Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_F13
         (630 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC096285-1|AAH96285.1|  574|Homo sapiens CYP11B1 protein protein.      34   0.48 
BC103827-1|AAI03828.1|  440|Homo sapiens golgi reassembly stacki...    30   7.8  
BC103826-1|AAI03827.1|  440|Homo sapiens golgi reassembly stacki...    30   7.8  
BC075854-1|AAH75854.1|  440|Homo sapiens golgi reassembly stacki...    30   7.8  
AK091168-1|BAC03598.1|  246|Homo sapiens protein ( Homo sapiens ...    30   7.8  
AJ409349-1|CAC35160.1|  440|Homo sapiens golgi perepheral membra...    30   7.8  

>BC096285-1|AAH96285.1|  574|Homo sapiens CYP11B1 protein protein.
          Length = 574

 Score = 33.9 bits (74), Expect = 0.48
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = -2

Query: 380 RLSRLYSNWSNNRFRRCLWRCYSRNWCR 297
           R S  +  W  +  R  LWRC  R WCR
Sbjct: 82  RHSASFGRWGRSAARAGLWRCQGRGWCR 109


>BC103827-1|AAI03828.1|  440|Homo sapiens golgi reassembly stacking
           protein 1, 65kDa protein.
          Length = 440

 Score = 29.9 bits (64), Expect = 7.8
 Identities = 18/55 (32%), Positives = 25/55 (45%)
 Frame = +3

Query: 375 QPPNQIKPVPVNPTPSAHPVTTPGPGSVKQLVNFYDSQGKGSPIRPYTYSQAVKQ 539
           QPP+  K  P  P PSA P+  P P ++       DS    +  R   Y +A+ Q
Sbjct: 205 QPPSYHKKPPGTPPPSALPLGAPPPDALPPGPTPEDSPSLETGSRQSDYMEALLQ 259


>BC103826-1|AAI03827.1|  440|Homo sapiens golgi reassembly stacking
           protein 1, 65kDa protein.
          Length = 440

 Score = 29.9 bits (64), Expect = 7.8
 Identities = 18/55 (32%), Positives = 25/55 (45%)
 Frame = +3

Query: 375 QPPNQIKPVPVNPTPSAHPVTTPGPGSVKQLVNFYDSQGKGSPIRPYTYSQAVKQ 539
           QPP+  K  P  P PSA P+  P P ++       DS    +  R   Y +A+ Q
Sbjct: 205 QPPSYHKKPPGTPPPSALPLGAPPPDALPPGPTPEDSPSLETGSRQSDYMEALLQ 259


>BC075854-1|AAH75854.1|  440|Homo sapiens golgi reassembly stacking
           protein 1, 65kDa protein.
          Length = 440

 Score = 29.9 bits (64), Expect = 7.8
 Identities = 18/55 (32%), Positives = 25/55 (45%)
 Frame = +3

Query: 375 QPPNQIKPVPVNPTPSAHPVTTPGPGSVKQLVNFYDSQGKGSPIRPYTYSQAVKQ 539
           QPP+  K  P  P PSA P+  P P ++       DS    +  R   Y +A+ Q
Sbjct: 205 QPPSYHKKPPGTPPPSALPLGAPPPDALPPGPTPEDSPSLETGSRQSDYMEALLQ 259


>AK091168-1|BAC03598.1|  246|Homo sapiens protein ( Homo sapiens
           cDNA FLJ33849 fis, clone CTONG2005585, moderately
           similar to Rattus norvegicus golgi peripheral membrane
           protein p65 ).
          Length = 246

 Score = 29.9 bits (64), Expect = 7.8
 Identities = 18/55 (32%), Positives = 25/55 (45%)
 Frame = +3

Query: 375 QPPNQIKPVPVNPTPSAHPVTTPGPGSVKQLVNFYDSQGKGSPIRPYTYSQAVKQ 539
           QPP+  K  P  P PSA P+  P P ++       DS    +  R   Y +A+ Q
Sbjct: 132 QPPSYHKKPPGTPPPSALPLGAPPPDALPPGPTPEDSPSLETGSRQSDYMEALLQ 186


>AJ409349-1|CAC35160.1|  440|Homo sapiens golgi perepheral membrane
           protein, p65 protein.
          Length = 440

 Score = 29.9 bits (64), Expect = 7.8
 Identities = 18/55 (32%), Positives = 25/55 (45%)
 Frame = +3

Query: 375 QPPNQIKPVPVNPTPSAHPVTTPGPGSVKQLVNFYDSQGKGSPIRPYTYSQAVKQ 539
           QPP+  K  P  P PSA P+  P P ++       DS    +  R   Y +A+ Q
Sbjct: 205 QPPSYHKKPPGTPPPSALPLGAPPPDALPPGPTPEDSPSLETGSRQSDYMEALLQ 259


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,905,746
Number of Sequences: 237096
Number of extensions: 1635021
Number of successful extensions: 5248
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4518
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5197
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6860268620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)