Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_F13
         (630 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e...    32   0.39 
AC024824-2|AAK85502.1|  740|Caenorhabditis elegans Hypothetical ...    31   0.90 
Z81568-3|CAB04592.1|  643|Caenorhabditis elegans Hypothetical pr...    28   4.8  
Z79756-9|CAK12562.1|  830|Caenorhabditis elegans Hypothetical pr...    28   6.3  
Z79756-8|CAB02122.1|  891|Caenorhabditis elegans Hypothetical pr...    28   6.3  
Z79756-7|CAK12561.1|  855|Caenorhabditis elegans Hypothetical pr...    28   6.3  
Z69903-7|CAA93776.1| 1607|Caenorhabditis elegans Hypothetical pr...    28   6.3  
Z69660-1|CAA93489.1| 1607|Caenorhabditis elegans Hypothetical pr...    28   6.3  
U39651-4|AAA80396.1|   78|Caenorhabditis elegans Hypothetical pr...    28   6.3  
U39651-3|AAA80395.1|  175|Caenorhabditis elegans Hypothetical pr...    28   6.3  
U39651-1|AAA80393.2|  260|Caenorhabditis elegans Hypothetical pr...    28   6.3  
AL023835-10|CAA19494.2|  691|Caenorhabditis elegans Hypothetical...    28   6.3  
AF067610-1|AAC17538.2|  696|Caenorhabditis elegans Hypothetical ...    28   6.3  
Z70205-10|CAA94122.2|  887|Caenorhabditis elegans Hypothetical p...    27   8.4  
Z68003-5|CAA91979.2|  887|Caenorhabditis elegans Hypothetical pr...    27   8.4  
U80024-3|AAK18893.1|  342|Caenorhabditis elegans Seven tm recept...    27   8.4  

>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of
           efl-1 mutant phenotypeprotein 1 protein.
          Length = 4177

 Score = 31.9 bits (69), Expect = 0.39
 Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
 Frame = +3

Query: 378 PPNQIKPVPVN---PTPSAHPVTTPGPGSVKQLVNFYDSQGKGSP 503
           P +Q  PVP+    P P A P+  P P  V       DS+ KG P
Sbjct: 516 PVDQEAPVPIEVDAPLPPASPIAAPAPVPVASASTSSDSKIKGGP 560


>AC024824-2|AAK85502.1|  740|Caenorhabditis elegans Hypothetical
           protein Y55B1BR.2 protein.
          Length = 740

 Score = 30.7 bits (66), Expect = 0.90
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +3

Query: 381 PNQIKPVPVNPTPSAHPVTTPGPGSVK 461
           P  +  VP  PTPS  P+  PG GS +
Sbjct: 282 PPSVPAVPAVPTPSRDPILGPGSGSAR 308


>Z81568-3|CAB04592.1|  643|Caenorhabditis elegans Hypothetical
           protein K08E3.4 protein.
          Length = 643

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = +3

Query: 393 KPVPVNPTPSAHPVTTPGPGSVKQLVNFYDSQGKGSPIRP 512
           KPVP +  P+  P  TP  G V      + S+  G P+ P
Sbjct: 361 KPVPSSVNPAPAPAPTPSAGLVGSRKELFSSKPSG-PVLP 399


>Z79756-9|CAK12562.1|  830|Caenorhabditis elegans Hypothetical
           protein F53C11.5c protein.
          Length = 830

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +3

Query: 378 PPNQIKPVPVNPTPSAHPVTTPGPGSVKQL 467
           PP+Q   +P    PS  P   P PG  +Q+
Sbjct: 417 PPSQSSNIPPPSLPSPRPSALPAPGFSRQI 446


>Z79756-8|CAB02122.1|  891|Caenorhabditis elegans Hypothetical
           protein F53C11.5b protein.
          Length = 891

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +3

Query: 378 PPNQIKPVPVNPTPSAHPVTTPGPGSVKQL 467
           PP+Q   +P    PS  P   P PG  +Q+
Sbjct: 478 PPSQSSNIPPPSLPSPRPSALPAPGFSRQI 507


>Z79756-7|CAK12561.1|  855|Caenorhabditis elegans Hypothetical
           protein F53C11.5a protein.
          Length = 855

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +3

Query: 378 PPNQIKPVPVNPTPSAHPVTTPGPGSVKQL 467
           PP+Q   +P    PS  P   P PG  +Q+
Sbjct: 442 PPSQSSNIPPPSLPSPRPSALPAPGFSRQI 471


>Z69903-7|CAA93776.1| 1607|Caenorhabditis elegans Hypothetical
           protein F39B1.1 protein.
          Length = 1607

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 18/46 (39%), Positives = 24/46 (52%)
 Frame = +3

Query: 387 QIKPVPVNPTPSAHPVTTPGPGSVKQLVNFYDSQGKGSPIRPYTYS 524
           Q  PVP++PTP     +TP   S     +  DSQ   SPI+P+  S
Sbjct: 156 QSPPVPIHPTPPVS--STPLRHSAPSFAS--DSQQFLSPIKPFEIS 197


>Z69660-1|CAA93489.1| 1607|Caenorhabditis elegans Hypothetical
           protein F39B1.1 protein.
          Length = 1607

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 18/46 (39%), Positives = 24/46 (52%)
 Frame = +3

Query: 387 QIKPVPVNPTPSAHPVTTPGPGSVKQLVNFYDSQGKGSPIRPYTYS 524
           Q  PVP++PTP     +TP   S     +  DSQ   SPI+P+  S
Sbjct: 156 QSPPVPIHPTPPVS--STPLRHSAPSFAS--DSQQFLSPIKPFEIS 197


>U39651-4|AAA80396.1|   78|Caenorhabditis elegans Hypothetical
           protein ZK470.2b protein.
          Length = 78

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +3

Query: 411 PTPSAHPVTTPGPGS 455
           P P++ PVTTP PGS
Sbjct: 29  PAPTSAPVTTPAPGS 43


>U39651-3|AAA80395.1|  175|Caenorhabditis elegans Hypothetical
           protein ZK470.2a protein.
          Length = 175

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +3

Query: 411 PTPSAHPVTTPGPGS 455
           P P++ PVTTP PGS
Sbjct: 126 PAPTSAPVTTPAPGS 140


>U39651-1|AAA80393.2|  260|Caenorhabditis elegans Hypothetical
           protein ZK470.2c protein.
          Length = 260

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +3

Query: 411 PTPSAHPVTTPGPGS 455
           P P++ PVTTP PGS
Sbjct: 211 PAPTSAPVTTPAPGS 225


>AL023835-10|CAA19494.2|  691|Caenorhabditis elegans Hypothetical
           protein Y37A1B.11 protein.
          Length = 691

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = +3

Query: 378 PPNQIKPVPVNPTPSAHPVTTPGP 449
           PP   +P P  PTP   PV  P P
Sbjct: 549 PPPPREPTPREPTPEPEPVREPTP 572


>AF067610-1|AAC17538.2|  696|Caenorhabditis elegans Hypothetical
           protein F41A4.1 protein.
          Length = 696

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 16/58 (27%), Positives = 28/58 (48%)
 Frame = -2

Query: 332 CLWRCYSRNWCRPRWNWNSGSLCRNLSRARITTVLCATAFHINEINICIFINGLVCFA 159
           CL +C   + CR   + N  SLC+ LSR  + +V     +     ++ ++ N  V +A
Sbjct: 140 CLSQCQKESSCRAALHNNDTSLCQ-LSRVSLNSVYNPRLYFKASYSVDLYENNCVDYA 196


>Z70205-10|CAA94122.2|  887|Caenorhabditis elegans Hypothetical
           protein E02H4.3a protein.
          Length = 887

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = +3

Query: 378 PPNQIKPVPVNPTPSAHPVTTPGPGSVKQ 464
           PP+Q K  P NPTP+ +PV  P P +V +
Sbjct: 97  PPHQ-KMTP-NPTPTQNPVQLPLPHAVSE 123


>Z68003-5|CAA91979.2|  887|Caenorhabditis elegans Hypothetical
           protein E02H4.3a protein.
          Length = 887

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = +3

Query: 378 PPNQIKPVPVNPTPSAHPVTTPGPGSVKQ 464
           PP+Q K  P NPTP+ +PV  P P +V +
Sbjct: 97  PPHQ-KMTP-NPTPTQNPVQLPLPHAVSE 123


>U80024-3|AAK18893.1|  342|Caenorhabditis elegans Seven tm receptor
           protein 190 protein.
          Length = 342

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 8/23 (34%), Positives = 17/23 (73%)
 Frame = -2

Query: 230 LCATAFHINEINICIFINGLVCF 162
           +C T+F ++   +C+FI G++C+
Sbjct: 198 VCQTSFMVSSSLMCVFIFGVLCY 220


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,791,977
Number of Sequences: 27780
Number of extensions: 262055
Number of successful extensions: 857
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 850
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)