Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_F13
         (630 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    23   3.2  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   4.3  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    21   7.5  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    21   9.9  

>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = -2

Query: 461 FNTTRSWGGYRVC*RCRIDWHRFNLIRRLSR 369
           F TT   G Y +     I WH+  L+RR SR
Sbjct: 238 FITTEVAGTYAIF--LYISWHQKELVRRDSR 266


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 5/17 (29%), Positives = 12/17 (70%)
 Frame = -2

Query: 299 RPRWNWNSGSLCRNLSR 249
           RP WNW++  + +++ +
Sbjct: 837 RPYWNWSNQDVIKSIEK 853


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 11/27 (40%), Positives = 12/27 (44%)
 Frame = +3

Query: 411 PTPSAHPVTTPGPGSVKQLVNFYDSQG 491
           PTP+ HP T     S K      D QG
Sbjct: 126 PTPNGHPSTPIVYASCKLQAAAVDHQG 152


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +3

Query: 402 PVNPTPSAHPVTTPGPGSVK 461
           P  P P   P ++ GP S K
Sbjct: 338 PPKPAPPPPPPSSSGPDSAK 357


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,408
Number of Sequences: 438
Number of extensions: 3428
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18826962
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)