Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_F11
         (438 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    21   3.9  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   3.9  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   5.1  
AY600516-1|AAT11864.1|  143|Tribolium castaneum optomotor-blind-...    21   6.8  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   6.8  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   6.8  

>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 11/43 (25%), Positives = 14/43 (32%)
 Frame = +2

Query: 251 MSGGSPGLGSHMHVMEVKESRASPLPVPSQQPNATSTQQAPQP 379
           M GG  G   H      ++      P   QQP   +    P P
Sbjct: 189 MYGGQQGANMHQQGPPHQQPPIQQQPNQGQQPPGNTAAALPSP 231


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 11/43 (25%), Positives = 14/43 (32%)
 Frame = +2

Query: 251 MSGGSPGLGSHMHVMEVKESRASPLPVPSQQPNATSTQQAPQP 379
           M GG  G   H      ++      P   QQP   +    P P
Sbjct: 191 MYGGQQGANMHQQGPPHQQPPIQQQPNQGQQPPGNTAAALPSP 233


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = +2

Query: 320 PLPVPSQQPNATSTQQAPQ 376
           P+P P  QP  T+  +  Q
Sbjct: 395 PVPTPEPQPTQTTESEPTQ 413


>AY600516-1|AAT11864.1|  143|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 143

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = -3

Query: 151 SLHMEKITTRKNYVHGCIRVKYLYCSTTQKSFSRSQP 41
           S H  K+T   +  HG ++ K +   T   S  + QP
Sbjct: 73  SFHKLKLTNNISDKHGFLKEKAVDFLTILNSMHKYQP 109


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -1

Query: 432 AFSKYRSVITLLQ 394
           AFSKY+ V+ +LQ
Sbjct: 186 AFSKYQFVVLVLQ 198


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -1

Query: 432 AFSKYRSVITLLQ 394
           AFSKY+ V+ +LQ
Sbjct: 186 AFSKYQFVVLVLQ 198


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,281
Number of Sequences: 336
Number of extensions: 2510
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9775509
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)