Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_F11
(438 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0974 + 29831274-29833184 33 0.13
01_06_0747 - 31645136-31646521,31647870-31648142,31649080-316491... 30 0.71
02_02_0489 + 10869482-10871218 30 0.93
06_03_1220 - 28505306-28508497 29 1.6
05_05_0305 - 23970692-23970825,23972323-23973703 29 1.6
12_02_0330 - 17612867-17613161,17613376-17613459,17613554-176137... 29 2.2
04_04_1108 + 30961600-30962013,30963131-30964465 29 2.2
03_05_0272 + 22604458-22604877 28 2.9
09_03_0185 + 13206920-13207650,13208671-13208734,13208927-13208938 28 3.8
12_01_0173 - 1292164-1293036,1294063-1294098,1294195-1294334,129... 27 5.0
09_04_0473 - 17906802-17907964,17908175-17908871,17910323-17910784 27 5.0
08_01_1035 + 10501861-10502044,10502145-10502542 27 5.0
05_04_0177 + 18770409-18770897 27 5.0
03_05_0050 + 20285475-20286092,20287481-20287840 27 5.0
01_01_0812 + 6318453-6318726,6318826-6319041,6319147-6319665,632... 27 5.0
07_03_0141 + 14249788-14249992,14250240-14250295 27 6.6
05_04_0114 + 18090593-18092248 27 6.6
02_04_0654 - 24755339-24755408,24755488-24755624,24756243-247563... 27 6.6
12_02_1057 + 25733376-25735439 27 8.7
11_01_0172 - 1383568-1384440,1385336-1385401,1385470-1385505,138... 27 8.7
07_03_0140 + 14238645-14238849,14239081-14239163 27 8.7
07_03_0134 + 14064515-14064719,14064962-14065044 27 8.7
06_01_0756 + 5653062-5653697 27 8.7
04_04_1395 + 33219711-33220629,33220750-33220787 27 8.7
01_02_0007 + 10132380-10133201 27 8.7
>04_04_0974 + 29831274-29833184
Length = 636
Score = 32.7 bits (71), Expect = 0.13
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -1
Query: 342 CCDGTGSGEARDSFTSMTCMCDPKP 268
CCD TG+G D+FT+ C P P
Sbjct: 137 CCDFTGNGGLLDTFTTTHAACQPAP 161
>01_06_0747 -
31645136-31646521,31647870-31648142,31649080-31649148,
31649486-31649614
Length = 618
Score = 30.3 bits (65), Expect = 0.71
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +2
Query: 218 FMKCERRTPQQMSGGSPGLGSHMHVMEVKESRASPLPVPSQQPNATSTQQ-APQP 379
F +++ PQQ S +P V + + + + P P P QQP ++TQQ PQP
Sbjct: 320 FPPYQQQWPQQSSQPAPA-----PVAQPQPTFSQPFPPPVQQPQLSNTQQFPPQP 369
Score = 26.6 bits (56), Expect = 8.7
Identities = 12/19 (63%), Positives = 14/19 (73%), Gaps = 1/19 (5%)
Frame = +2
Query: 326 PVPSQQPNATSTQQ-APQP 379
P P QQP ++TQQ APQP
Sbjct: 367 PQPMQQPQLSNTQQFAPQP 385
>02_02_0489 + 10869482-10871218
Length = 578
Score = 29.9 bits (64), Expect = 0.93
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Frame = +2
Query: 296 EVKESRASPLPVPS-----QQPNATSTQQAPQPQICAGCSKVITERYLLKA 433
E K+ RA+P P PS +P +S+ AP+P +G SK + KA
Sbjct: 119 EAKKKRAAPEPAPSGKAKKAKPEKSSSAAAPEPAPSSGKSKKAAKAEAAKA 169
>06_03_1220 - 28505306-28508497
Length = 1063
Score = 29.1 bits (62), Expect = 1.6
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -1
Query: 411 VITLLQPAQICGCGACCVDV 352
V+ L+ A ICGC A CV+V
Sbjct: 10 VLVLVLAATICGCAAACVEV 29
>05_05_0305 - 23970692-23970825,23972323-23973703
Length = 504
Score = 29.1 bits (62), Expect = 1.6
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -1
Query: 423 KYRSVITLLQPAQICGCGACCVDVALGCCDGTGSGE 316
KY ++ ++P Q CGC + C+ C G +GE
Sbjct: 426 KYLRPLSSMKPLQGCGCQSVCLPGDPNCACGQHNGE 461
>12_02_0330 -
17612867-17613161,17613376-17613459,17613554-17613744,
17614085-17614995,17615081-17615252,17615337-17615412,
17615515-17615634,17615841-17616005,17616096-17616186,
17616644-17616785,17616848-17617042,17617132-17617185,
17617299-17617397,17618181-17618296,17618376-17618442
Length = 925
Score = 28.7 bits (61), Expect = 2.2
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +1
Query: 25 PITNTPVAIAKNFSVLWNNINI-LREYNHEHNFY 123
P+++ P I+ N S WN IN+ + N HN Y
Sbjct: 524 PLSSFPSQISGNRSNTWNTINVHYPDQNANHNMY 557
>04_04_1108 + 30961600-30962013,30963131-30964465
Length = 582
Score = 28.7 bits (61), Expect = 2.2
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 7/48 (14%)
Frame = +2
Query: 290 VMEVKESRASPLP-----VPSQQPN-ATSTQQAPQPQI-CAGCSKVIT 412
+M + RA PLP VPS P AT+T AP ++ C GC+ V++
Sbjct: 43 LMPPRPRRALPLPGRASVVPSAVPAPATATAAAPPTRVSCGGCAAVLS 90
>03_05_0272 + 22604458-22604877
Length = 139
Score = 28.3 bits (60), Expect = 2.9
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 230 ERRTPQQMSGGSPGLGSHMHVMEVKESRASPLPVPSQQP 346
E + Q+++GG GL + V V+E A P P +QP
Sbjct: 69 EEQPEQRVAGGRAGLEVVLEVARVQERDAHQEPRPREQP 107
>09_03_0185 + 13206920-13207650,13208671-13208734,13208927-13208938
Length = 268
Score = 27.9 bits (59), Expect = 3.8
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +2
Query: 209 GRRFMKCERRTPQQMSGGSPGLGSHMHVME-VKESRASPLPVPSQQPNATSTQQAPQPQI 385
G R + + + + L +HVM+ VK + + L +P++ ATS+ QPQ+
Sbjct: 40 GERLDQVQAKVDLSLESLGQVLQEQIHVMQAVKRTVPATLVIPTRTMEATSSVTREQPQV 99
>12_01_0173 -
1292164-1293036,1294063-1294098,1294195-1294334,
1295592-1295748,1295862-1296035,1296146-1296396,
1299446-1299590
Length = 591
Score = 27.5 bits (58), Expect = 5.0
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = +2
Query: 251 MSGGSPGLGSHMHVMEVKESRAS---PLPVPSQQPNATSTQQAPQPQ 382
+SG +P ++M R S PLP+P+Q N + QQ PQ
Sbjct: 511 VSGSAPPPPPLPNIMSAGFPRLSVPPPLPLPTQSQNQSQPQQQQSPQ 557
>09_04_0473 - 17906802-17907964,17908175-17908871,17910323-17910784
Length = 773
Score = 27.5 bits (58), Expect = 5.0
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = -1
Query: 438 SNAFSKYRSVITLLQPAQICGCGACC--VDVALGCCDGTGSGEA 313
S A+ + S IT + GC + C VD+ G C G G +A
Sbjct: 146 SLAYMRSTSFITRQSMQYVIGCSSTCDNVDLKNGSCSGAGCCQA 189
>08_01_1035 + 10501861-10502044,10502145-10502542
Length = 193
Score = 27.5 bits (58), Expect = 5.0
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 5/40 (12%)
Frame = +2
Query: 290 VMEVKESRA-----SPLPVPSQQPNATSTQQAPQPQICAG 394
VM K SR +P+P P+Q P A QAP P G
Sbjct: 129 VMSEKHSRRGQGFFAPVPAPAQSPLAAGLFQAPAPAPATG 168
>05_04_0177 + 18770409-18770897
Length = 162
Score = 27.5 bits (58), Expect = 5.0
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = +3
Query: 282 TCTSWR*KNRALPRSRCHHSSLMPHLHNRLRNHRSAPVA 398
+C R + P S H P L NR RNH APVA
Sbjct: 108 SCNHRRTPTDSAPTS--HRDHRPPSLMNRHRNHHQAPVA 144
>03_05_0050 + 20285475-20286092,20287481-20287840
Length = 325
Score = 27.5 bits (58), Expect = 5.0
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 203 LAGRRFMKCE-RRTPQQMSGGSPGLGSHMHVMEV 301
L G+RF K + T QQ+ GG G+GS V++V
Sbjct: 111 LKGKRFRKPDISETIQQLLGGKVGIGSRGVVVDV 144
>01_01_0812 +
6318453-6318726,6318826-6319041,6319147-6319665,
6320853-6321064
Length = 406
Score = 27.5 bits (58), Expect = 5.0
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -1
Query: 366 CCVDVALGCCDGTGSGEARDSFTSM 292
CC V L C G G G+ ++TSM
Sbjct: 16 CCSLVRLSRCGGGGGGQRAQNYTSM 40
>07_03_0141 + 14249788-14249992,14250240-14250295
Length = 86
Score = 27.1 bits (57), Expect = 6.6
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = -1
Query: 375 CGACCVDVALGCCDGTGSGEARDSFTSMTCMCDP 274
CG C A CC G + DS TC C P
Sbjct: 30 CGCCISSRAKACCFGCIAAGGSDSICKNTC-CFP 62
>05_04_0114 + 18090593-18092248
Length = 551
Score = 27.1 bits (57), Expect = 6.6
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = -1
Query: 369 ACCVDVALGCCDGTGSGEARDSFTSMTCMCDPKPGLPPLICCGVRLSHFMKRRP 208
+C VD+A G DG G GE R + + + L C GV S + R P
Sbjct: 110 SCVVDLAGGDADGGGVGEGRSAQRLASAFAEALALRFILPCDGVCRSLHLTRAP 163
>02_04_0654 -
24755339-24755408,24755488-24755624,24756243-24756326,
24756929-24756944,24758035-24758405
Length = 225
Score = 27.1 bits (57), Expect = 6.6
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = +2
Query: 227 CERRTPQQMSGGSPGLGSHMHVMEVKESRASPLPVPSQQPNATSTQQAPQP 379
C R P + GG+ G +E RA P P P P ++ Q P+P
Sbjct: 4 CARAEPPR-GGGTLGKRKERDRPSSEEQRAPPPPPPPLFPAMSARPQPPRP 53
>12_02_1057 + 25733376-25735439
Length = 687
Score = 26.6 bits (56), Expect = 8.7
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +2
Query: 320 PLPVPSQQPNATSTQQAPQPQICAG 394
PLP PS+ P+++ +P P + G
Sbjct: 259 PLPPPSRPPSSSPAPPSPPPSVSGG 283
>11_01_0172 -
1383568-1384440,1385336-1385401,1385470-1385505,
1385604-1385743,1386978-1387134,1387245-1387418,
1387540-1387790,1390296-1390446
Length = 615
Score = 26.6 bits (56), Expect = 8.7
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 308 SRASPLPVPSQQPNATSTQQAPQPQ 382
S PLP+P+Q N + QQ PQ
Sbjct: 557 SAPPPLPLPTQPQNQSQPQQQQSPQ 581
>07_03_0140 + 14238645-14238849,14239081-14239163
Length = 95
Score = 26.6 bits (56), Expect = 8.7
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = -1
Query: 375 CGACCVDVALGCCDGTGSGEARDSFTSMTCMCDP 274
CG C A CC G + DS TC C P
Sbjct: 30 CGCCISSRAKACCFGCIAAGGSDSVCKNTC-CFP 62
>07_03_0134 + 14064515-14064719,14064962-14065044
Length = 95
Score = 26.6 bits (56), Expect = 8.7
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = -1
Query: 375 CGACCVDVALGCCDGTGSGEARDSFTSMTCMCDP 274
CG C A CC G + DS TC C P
Sbjct: 30 CGCCISSRAKACCFGCIAAGGSDSVCKNTC-CFP 62
>06_01_0756 + 5653062-5653697
Length = 211
Score = 26.6 bits (56), Expect = 8.7
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = +2
Query: 284 MHVMEVKESRASPLPVPSQQPNATSTQQAPQPQI 385
MH++ +S + P PS P+A+ +Q+P +
Sbjct: 16 MHIISQLDSALASSPSPSTSPSASPPRQSPAAHV 49
>04_04_1395 + 33219711-33220629,33220750-33220787
Length = 318
Score = 26.6 bits (56), Expect = 8.7
Identities = 17/52 (32%), Positives = 22/52 (42%)
Frame = -1
Query: 411 VITLLQPAQICGCGACCVDVALGCCDGTGSGEARDSFTSMTCMCDPKPGLPP 256
V L P + GC C +V + G G G RD F + C + P PP
Sbjct: 15 VTALAAPVALPGCPETCGNVTVPYPFGIGHGCFRDGF-ELAC-DETHPAAPP 64
>01_02_0007 + 10132380-10133201
Length = 273
Score = 26.6 bits (56), Expect = 8.7
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +2
Query: 272 LGSHMHVMEVKESRASPLPVPSQQPNATSTQQAPQPQ 382
+G + ++ R P P+P PN Q PQPQ
Sbjct: 42 VGPQRKLQQLPNPRPQPQPLPQPNPN-PQPQPLPQPQ 77
Score = 26.6 bits (56), Expect = 8.7
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 305 ESRASPLPVPSQQPNATSTQQAPQP 379
+ A PLP+P QPN + Q PQP
Sbjct: 133 DPNAPPLPLP--QPNPNNPQPLPQP 155
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,198,695
Number of Sequences: 37544
Number of extensions: 295784
Number of successful extensions: 1106
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1052
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1100
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 823860276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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