Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_F11
(438 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC050085-1|AAH50085.1| 145|Homo sapiens LMO3 protein protein. 35 0.11
BC026311-1|AAH26311.1| 145|Homo sapiens LIM domain only 3 (rhom... 35 0.11
BC017777-1|AAH17777.1| 60|Homo sapiens LMO3 protein protein. 35 0.11
AF258348-1|AAF71368.1| 125|Homo sapiens neuronal specific trans... 35 0.11
AB044746-1|BAD93350.1| 145|Homo sapiens hypothetical protein pr... 35 0.11
AB044745-1|BAD93349.1| 156|Homo sapiens hypothetical protein pr... 35 0.11
AK095595-1|BAC04582.1| 145|Homo sapiens protein ( Homo sapiens ... 33 0.33
BC039512-1|AAH39512.1| 217|Homo sapiens LIM domain only 1 (rhom... 33 0.57
M26682-1|AAA36819.1| 156|Homo sapiens protein ( Human T-cell tr... 32 1.00
BC096058-1|AAH96058.1| 137|Homo sapiens LMO1 protein protein. 32 1.00
BC096057-1|AAH96057.1| 156|Homo sapiens LIM domain only 1 (rhom... 32 1.00
BC096056-1|AAH96056.1| 156|Homo sapiens LIM domain only 1 (rhom... 32 1.00
BC069793-1|AAH69793.1| 156|Homo sapiens LIM domain only 1 (rhom... 32 1.00
BC069752-1|AAH69752.1| 156|Homo sapiens LIM domain only 1 (rhom... 32 1.00
BC069673-1|AAH69673.1| 156|Homo sapiens LIM domain only 1 (rhom... 32 1.00
AJ277662-2|CAC14587.1| 156|Homo sapiens LIM domain only 1 prote... 32 1.00
X61118-1|CAA43430.1| 158|Homo sapiens TTG-2a/RBTN-2a protein. 31 1.3
BC042426-1|AAH42426.1| 158|Homo sapiens LMO2 protein protein. 31 1.3
BC035607-1|AAH35607.1| 158|Homo sapiens LMO2 protein protein. 31 1.3
BC034041-1|AAH34041.1| 158|Homo sapiens LMO2 protein protein. 31 1.3
AF182077-1|AAF62874.1| 1509|Homo sapiens glioma tumor suppressor... 31 2.3
U85962-1|AAC51331.2| 2442|Homo sapiens CREB-binding protein prot... 30 3.0
U47741-1|AAC51770.1| 2442|Homo sapiens CREB-binding protein prot... 30 3.0
BC103938-1|AAI03939.1| 362|Homo sapiens LIM homeobox 6 protein. 30 3.0
BC103937-1|AAI03938.1| 363|Homo sapiens LIM homeobox 6 protein. 30 3.0
BC103936-1|AAI03937.1| 348|Homo sapiens LIM homeobox 6 protein. 30 3.0
AL162424-5|CAO03566.1| 377|Homo sapiens LIM homeobox 6 protein. 30 3.0
AL162424-4|CAO03565.1| 392|Homo sapiens LIM homeobox 6 protein. 30 3.0
AL162424-3|CAI14704.1| 348|Homo sapiens LIM homeobox 6 protein. 30 3.0
AL162424-2|CAI14703.1| 363|Homo sapiens LIM homeobox 6 protein. 30 3.0
AB210043-1|BAE06125.1| 2472|Homo sapiens CREBBP variant protein ... 30 3.0
AB031042-1|BAA83423.1| 348|Homo sapiens LIM-homeodomain (LHX) p... 30 3.0
AB031041-1|BAA83422.1| 363|Homo sapiens LIM-homeodomain (LHX) p... 30 3.0
M38561-1|AAA51907.1| 474|Homo sapiens CAD protein. 29 5.3
D78586-1|BAA11423.1| 2225|Homo sapiens multifunctional protein C... 29 5.3
BC131622-1|AAI31623.1| 397|Homo sapiens LIM homeobox 9 protein. 29 5.3
BC065510-1|AAH65510.1| 2225|Homo sapiens carbamoyl-phosphate syn... 29 5.3
BC014178-1|AAH14178.2| 851|Homo sapiens CAD protein protein. 29 5.3
BC000124-1|AAH00124.2| 325|Homo sapiens sideroflexin 3 protein. 29 5.3
AY273889-1|AAP32471.2| 397|Homo sapiens LIM-homeobox 9 protein ... 29 5.3
AL590115-7|CAH71764.1| 330|Homo sapiens LIM homeobox 9 protein. 29 5.3
AL590115-6|CAH71763.1| 397|Homo sapiens LIM homeobox 9 protein. 29 5.3
AL133215-21|CAI10936.1| 321|Homo sapiens sideroflexin 3 protein. 29 5.3
AK074707-1|BAC11151.1| 325|Homo sapiens protein ( Homo sapiens ... 29 5.3
AC013413-1|AAY24293.1| 2151|Homo sapiens unknown protein. 29 5.3
X16660-1|CAA34646.1| 223|Homo sapiens p25 protein protein. 29 7.0
CR457174-1|CAG33455.1| 282|Homo sapiens 8D6A protein. 29 7.0
BC113491-1|AAI13492.1| 372|Homo sapiens LIM homeobox transcript... 29 7.0
BC112120-1|AAI12121.1| 372|Homo sapiens LIM homeobox transcript... 29 7.0
BC069601-1|AAH69601.1| 372|Homo sapiens LIM homeobox transcript... 29 7.0
BC069588-1|AAH69588.1| 377|Homo sapiens LMX1B protein protein. 29 7.0
BC007083-1|AAH07083.1| 282|Homo sapiens CD320 molecule protein. 29 7.0
BC000668-1|AAH00668.1| 282|Homo sapiens CD320 molecule protein. 29 7.0
AY358420-1|AAQ88786.1| 282|Homo sapiens SGGW198 protein. 29 7.0
AL365455-1|CAB97010.1| 282|Homo sapiens 8D6 antigen protein. 29 7.0
AL161908-2|CAH70295.1| 372|Homo sapiens LIM homeobox transcript... 29 7.0
AL161908-1|CAH70294.1| 402|Homo sapiens LIM homeobox transcript... 29 7.0
AL161731-2|CAI40918.1| 372|Homo sapiens LIM homeobox transcript... 29 7.0
AL161731-1|CAI40917.1| 402|Homo sapiens LIM homeobox transcript... 29 7.0
AK222623-1|BAD96343.1| 282|Homo sapiens 8D6 antigen variant pro... 29 7.0
AF528099-1|AAO62630.1| 2948|Homo sapiens transforming acidic coi... 29 7.0
AF161254-1|AAF61850.1| 282|Homo sapiens 8D6 antigen protein. 29 7.0
AF059575-1|AAC27294.1| 379|Homo sapiens LIM homeodomain protein... 29 7.0
AF057135-1|AAC39738.1| 372|Homo sapiens LIM homeodomain protein... 29 7.0
AB126079-1|BAD20206.1| 202|Homo sapiens keratin associated prot... 29 7.0
BC128260-1|AAI28261.1| 657|Homo sapiens VIT protein protein. 29 9.3
BC017841-1|AAH17841.1| 403|Homo sapiens ZNF365 protein protein. 29 9.3
AY358338-1|AAQ88704.1| 678|Homo sapiens VIT protein. 29 9.3
AL135793-9|CAI95134.1| 2948|Homo sapiens transforming, acidic co... 29 9.3
AL135793-7|CAI95132.1| 2675|Homo sapiens transforming, acidic co... 29 9.3
AK056772-1|BAB71279.1| 693|Homo sapiens protein ( Homo sapiens ... 29 9.3
AJ505147-1|CAD43726.1| 407|Homo sapiens zinc finger protein pro... 29 9.3
AF063833-1|AAL18263.1| 656|Homo sapiens vitrin protein. 29 9.3
AC007363-1|AAF19243.2| 693|Homo sapiens unknown protein. 29 9.3
AB020651-1|BAA74867.2| 438|Homo sapiens KIAA0844 protein protein. 29 9.3
>BC050085-1|AAH50085.1| 145|Homo sapiens LMO3 protein protein.
Length = 145
Score = 35.1 bits (77), Expect = 0.11
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2
Query: 356 STQQAPQPQICAGCSKVITERYLLKAL 436
S Q +P+ CAGC++ I +RYLLKAL
Sbjct: 3 SVQPDTKPKGCAGCNRKIKDRYLLKAL 29
>BC026311-1|AAH26311.1| 145|Homo sapiens LIM domain only 3
(rhombotin-like 2) protein.
Length = 145
Score = 35.1 bits (77), Expect = 0.11
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2
Query: 356 STQQAPQPQICAGCSKVITERYLLKAL 436
S Q +P+ CAGC++ I +RYLLKAL
Sbjct: 3 SVQPDTKPKGCAGCNRKIKDRYLLKAL 29
>BC017777-1|AAH17777.1| 60|Homo sapiens LMO3 protein protein.
Length = 60
Score = 35.1 bits (77), Expect = 0.11
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2
Query: 356 STQQAPQPQICAGCSKVITERYLLKAL 436
S Q +P+ CAGC++ I +RYLLKAL
Sbjct: 3 SVQPDTKPKGCAGCNRKIKDRYLLKAL 29
>AF258348-1|AAF71368.1| 125|Homo sapiens neuronal specific
transcription factor DAT1 protein.
Length = 125
Score = 35.1 bits (77), Expect = 0.11
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2
Query: 356 STQQAPQPQICAGCSKVITERYLLKAL 436
S Q +P+ CAGC++ I +RYLLKAL
Sbjct: 3 SVQPDTKPKGCAGCNRKIKDRYLLKAL 29
>AB044746-1|BAD93350.1| 145|Homo sapiens hypothetical protein
protein.
Length = 145
Score = 35.1 bits (77), Expect = 0.11
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2
Query: 356 STQQAPQPQICAGCSKVITERYLLKAL 436
S Q +P+ CAGC++ I +RYLLKAL
Sbjct: 3 SVQPDTKPKGCAGCNRKIKDRYLLKAL 29
>AB044745-1|BAD93349.1| 156|Homo sapiens hypothetical protein
protein.
Length = 156
Score = 35.1 bits (77), Expect = 0.11
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2
Query: 356 STQQAPQPQICAGCSKVITERYLLKAL 436
S Q +P+ CAGC++ I +RYLLKAL
Sbjct: 14 SVQPDTKPKGCAGCNRKIKDRYLLKAL 40
>AK095595-1|BAC04582.1| 145|Homo sapiens protein ( Homo sapiens
cDNA FLJ38276 fis, clone FCBBF3004323, highly similar to
RHOMBOTIN-1. ).
Length = 145
Score = 33.5 bits (73), Expect = 0.33
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +2
Query: 356 STQQAPQPQICAGCSKVITERYLLKA 433
S Q +P+ CAGC++ I +RYLLKA
Sbjct: 3 SVQPDTKPKGCAGCNRKIKDRYLLKA 28
>BC039512-1|AAH39512.1| 217|Homo sapiens LIM domain only 1
(rhombotin 1) protein.
Length = 217
Score = 32.7 bits (71), Expect = 0.57
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +2
Query: 248 QMSGGSPGLGSHMHVMEVKESRASPLPVPSQQPNAT--STQQAPQPQICAGCSKVITERY 421
Q +GG + + ++ + A V Q+ S Q + + CAGC++ I +RY
Sbjct: 37 QAAGGGSRSHAPLRILGASPAGAVGTMVLDQEDGVPMLSVQPKGKQKGCAGCNRKIKDRY 96
Query: 422 LLKAL 436
LLKAL
Sbjct: 97 LLKAL 101
>M26682-1|AAA36819.1| 156|Homo sapiens protein ( Human T-cell
translocation gene 1 (Ttg-1) mRNA, complete cds. ).
Length = 156
Score = 31.9 bits (69), Expect = 1.00
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +2
Query: 356 STQQAPQPQICAGCSKVITERYLLKAL 436
S Q + + CAGC++ I +RYLLKAL
Sbjct: 14 SVQPKGKQKGCAGCNRKIKDRYLLKAL 40
>BC096058-1|AAH96058.1| 137|Homo sapiens LMO1 protein protein.
Length = 137
Score = 31.9 bits (69), Expect = 1.00
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +2
Query: 356 STQQAPQPQICAGCSKVITERYLLKAL 436
S Q + + CAGC++ I +RYLLKAL
Sbjct: 14 SVQPKGKQKGCAGCNRKIKDRYLLKAL 40
>BC096057-1|AAH96057.1| 156|Homo sapiens LIM domain only 1
(rhombotin 1) protein.
Length = 156
Score = 31.9 bits (69), Expect = 1.00
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +2
Query: 356 STQQAPQPQICAGCSKVITERYLLKAL 436
S Q + + CAGC++ I +RYLLKAL
Sbjct: 14 SVQPKGKQKGCAGCNRKIKDRYLLKAL 40
>BC096056-1|AAH96056.1| 156|Homo sapiens LIM domain only 1
(rhombotin 1) protein.
Length = 156
Score = 31.9 bits (69), Expect = 1.00
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +2
Query: 356 STQQAPQPQICAGCSKVITERYLLKAL 436
S Q + + CAGC++ I +RYLLKAL
Sbjct: 14 SVQPKGKQKGCAGCNRKIKDRYLLKAL 40
>BC069793-1|AAH69793.1| 156|Homo sapiens LIM domain only 1
(rhombotin 1) protein.
Length = 156
Score = 31.9 bits (69), Expect = 1.00
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +2
Query: 356 STQQAPQPQICAGCSKVITERYLLKAL 436
S Q + + CAGC++ I +RYLLKAL
Sbjct: 14 SVQPKGKQKGCAGCNRKIKDRYLLKAL 40
>BC069752-1|AAH69752.1| 156|Homo sapiens LIM domain only 1
(rhombotin 1) protein.
Length = 156
Score = 31.9 bits (69), Expect = 1.00
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +2
Query: 356 STQQAPQPQICAGCSKVITERYLLKAL 436
S Q + + CAGC++ I +RYLLKAL
Sbjct: 14 SVQPKGKQKGCAGCNRKIKDRYLLKAL 40
>BC069673-1|AAH69673.1| 156|Homo sapiens LIM domain only 1
(rhombotin 1) protein.
Length = 156
Score = 31.9 bits (69), Expect = 1.00
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +2
Query: 356 STQQAPQPQICAGCSKVITERYLLKAL 436
S Q + + CAGC++ I +RYLLKAL
Sbjct: 14 SVQPKGKQKGCAGCNRKIKDRYLLKAL 40
>AJ277662-2|CAC14587.1| 156|Homo sapiens LIM domain only 1 protein
protein.
Length = 156
Score = 31.9 bits (69), Expect = 1.00
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +2
Query: 356 STQQAPQPQICAGCSKVITERYLLKAL 436
S Q + + CAGC++ I +RYLLKAL
Sbjct: 14 SVQPKGKQKGCAGCNRKIKDRYLLKAL 40
>X61118-1|CAA43430.1| 158|Homo sapiens TTG-2a/RBTN-2a protein.
Length = 158
Score = 31.5 bits (68), Expect = 1.3
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +2
Query: 332 PSQQPNATSTQQAPQPQICAGCSKVITERYLLKAL 436
PS++P Q P C GC + I +RY LKA+
Sbjct: 12 PSEEPVDEVLQIPPSLLTCGGCQQNIGDRYFLKAI 46
>BC042426-1|AAH42426.1| 158|Homo sapiens LMO2 protein protein.
Length = 158
Score = 31.5 bits (68), Expect = 1.3
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +2
Query: 332 PSQQPNATSTQQAPQPQICAGCSKVITERYLLKAL 436
PS++P Q P C GC + I +RY LKA+
Sbjct: 12 PSEEPVDEVLQIPPSLLTCGGCQQNIGDRYFLKAI 46
>BC035607-1|AAH35607.1| 158|Homo sapiens LMO2 protein protein.
Length = 158
Score = 31.5 bits (68), Expect = 1.3
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +2
Query: 332 PSQQPNATSTQQAPQPQICAGCSKVITERYLLKAL 436
PS++P Q P C GC + I +RY LKA+
Sbjct: 12 PSEEPVDEVLQIPPSLLTCGGCQQNIGDRYFLKAI 46
>BC034041-1|AAH34041.1| 158|Homo sapiens LMO2 protein protein.
Length = 158
Score = 31.5 bits (68), Expect = 1.3
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +2
Query: 332 PSQQPNATSTQQAPQPQICAGCSKVITERYLLKAL 436
PS++P Q P C GC + I +RY LKA+
Sbjct: 12 PSEEPVDEVLQIPPSLLTCGGCQQNIGDRYFLKAI 46
>AF182077-1|AAF62874.1| 1509|Homo sapiens glioma tumor suppressor
candidate region protein 1 protein.
Length = 1509
Score = 30.7 bits (66), Expect = 2.3
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +2
Query: 239 TPQQMSGGSPGLGSHMHVMEVKESRASPLPVPSQQPNATSTQQAPQPQICA 391
TP +G + + + + + ++PLP+ QQP A QAP PQ A
Sbjct: 556 TPAAATGEAAPVLTVQPAPQAPPAVSTPLPLGLQQPQAQQPPQAPTPQAAA 606
>U85962-1|AAC51331.2| 2442|Homo sapiens CREB-binding protein protein.
Length = 2442
Score = 30.3 bits (65), Expect = 3.0
Identities = 17/54 (31%), Positives = 22/54 (40%)
Frame = +2
Query: 230 ERRTPQQMSGGSPGLGSHMHVMEVKESRASPLPVPSQQPNATSTQQAPQPQICA 391
+ TP M+ P + V S +P P P P+AT TQ P Q A
Sbjct: 870 QHTTPPGMTPPQPAAPTQPST-PVSSSGQTPTPTPGSVPSATQTQSTPTVQAAA 922
>U47741-1|AAC51770.1| 2442|Homo sapiens CREB-binding protein protein.
Length = 2442
Score = 30.3 bits (65), Expect = 3.0
Identities = 17/54 (31%), Positives = 22/54 (40%)
Frame = +2
Query: 230 ERRTPQQMSGGSPGLGSHMHVMEVKESRASPLPVPSQQPNATSTQQAPQPQICA 391
+ TP M+ P + V S +P P P P+AT TQ P Q A
Sbjct: 870 QHTTPPGMTPPQPAAPTQPST-PVSSSGQTPTPTPGSVPSATQTQSTPTVQAAA 922
>BC103938-1|AAI03939.1| 362|Homo sapiens LIM homeobox 6 protein.
Length = 362
Score = 30.3 bits (65), Expect = 3.0
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Frame = +2
Query: 293 MEVKESRASPL----PVPSQQPNATSTQQAPQPQICAGCSKVITERYLLK 430
++ E +ASP P P+A S+ + IC+ C I +RYLLK
Sbjct: 35 LDKDEGQASPCTPSTPSVCSPPSAASSVPSAGKNICSSCGLEILDRYLLK 84
>BC103937-1|AAI03938.1| 363|Homo sapiens LIM homeobox 6 protein.
Length = 363
Score = 30.3 bits (65), Expect = 3.0
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Frame = +2
Query: 293 MEVKESRASPL----PVPSQQPNATSTQQAPQPQICAGCSKVITERYLLK 430
++ E +ASP P P+A S+ + IC+ C I +RYLLK
Sbjct: 35 LDKDEGQASPCTPSTPSVCSPPSAASSVPSAGKNICSSCGLEILDRYLLK 84
>BC103936-1|AAI03937.1| 348|Homo sapiens LIM homeobox 6 protein.
Length = 348
Score = 30.3 bits (65), Expect = 3.0
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Frame = +2
Query: 293 MEVKESRASPL----PVPSQQPNATSTQQAPQPQICAGCSKVITERYLLK 430
++ E +ASP P P+A S+ + IC+ C I +RYLLK
Sbjct: 35 LDKDEGQASPCTPSTPSVCSPPSAASSVPSAGKNICSSCGLEILDRYLLK 84
>AL162424-5|CAO03566.1| 377|Homo sapiens LIM homeobox 6 protein.
Length = 377
Score = 30.3 bits (65), Expect = 3.0
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Frame = +2
Query: 293 MEVKESRASPL----PVPSQQPNATSTQQAPQPQICAGCSKVITERYLLK 430
++ E +ASP P P+A S+ + IC+ C I +RYLLK
Sbjct: 64 LDKDEGQASPCTPSTPSVCSPPSAASSVPSAGKNICSSCGLEILDRYLLK 113
>AL162424-4|CAO03565.1| 392|Homo sapiens LIM homeobox 6 protein.
Length = 392
Score = 30.3 bits (65), Expect = 3.0
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Frame = +2
Query: 293 MEVKESRASPL----PVPSQQPNATSTQQAPQPQICAGCSKVITERYLLK 430
++ E +ASP P P+A S+ + IC+ C I +RYLLK
Sbjct: 64 LDKDEGQASPCTPSTPSVCSPPSAASSVPSAGKNICSSCGLEILDRYLLK 113
>AL162424-3|CAI14704.1| 348|Homo sapiens LIM homeobox 6 protein.
Length = 348
Score = 30.3 bits (65), Expect = 3.0
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Frame = +2
Query: 293 MEVKESRASPL----PVPSQQPNATSTQQAPQPQICAGCSKVITERYLLK 430
++ E +ASP P P+A S+ + IC+ C I +RYLLK
Sbjct: 35 LDKDEGQASPCTPSTPSVCSPPSAASSVPSAGKNICSSCGLEILDRYLLK 84
>AL162424-2|CAI14703.1| 363|Homo sapiens LIM homeobox 6 protein.
Length = 363
Score = 30.3 bits (65), Expect = 3.0
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Frame = +2
Query: 293 MEVKESRASPL----PVPSQQPNATSTQQAPQPQICAGCSKVITERYLLK 430
++ E +ASP P P+A S+ + IC+ C I +RYLLK
Sbjct: 35 LDKDEGQASPCTPSTPSVCSPPSAASSVPSAGKNICSSCGLEILDRYLLK 84
>AB210043-1|BAE06125.1| 2472|Homo sapiens CREBBP variant protein
protein.
Length = 2472
Score = 30.3 bits (65), Expect = 3.0
Identities = 17/54 (31%), Positives = 22/54 (40%)
Frame = +2
Query: 230 ERRTPQQMSGGSPGLGSHMHVMEVKESRASPLPVPSQQPNATSTQQAPQPQICA 391
+ TP M+ P + V S +P P P P+AT TQ P Q A
Sbjct: 900 QHTTPPGMTPPQPAAPTQPST-PVSSSGQTPTPTPGSVPSATQTQSTPTVQAAA 952
>AB031042-1|BAA83423.1| 348|Homo sapiens LIM-homeodomain (LHX)
protein 6.1b protein.
Length = 348
Score = 30.3 bits (65), Expect = 3.0
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Frame = +2
Query: 293 MEVKESRASPL----PVPSQQPNATSTQQAPQPQICAGCSKVITERYLLK 430
++ E +ASP P P+A S+ + IC+ C I +RYLLK
Sbjct: 35 LDKDEGQASPCTPSTPSVCSPPSAASSVPSAGKNICSSCGLEILDRYLLK 84
>AB031041-1|BAA83422.1| 363|Homo sapiens LIM-homeodomain (LHX)
protein 6.1a protein.
Length = 363
Score = 30.3 bits (65), Expect = 3.0
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Frame = +2
Query: 293 MEVKESRASPL----PVPSQQPNATSTQQAPQPQICAGCSKVITERYLLK 430
++ E +ASP P P+A S+ + IC+ C I +RYLLK
Sbjct: 35 LDKDEGQASPCTPSTPSVCSPPSAASSVPSAGKNICSSCGLEILDRYLLK 84
>M38561-1|AAA51907.1| 474|Homo sapiens CAD protein.
Length = 474
Score = 29.5 bits (63), Expect = 5.3
Identities = 13/49 (26%), Positives = 27/49 (55%)
Frame = +2
Query: 239 TPQQMSGGSPGLGSHMHVMEVKESRASPLPVPSQQPNATSTQQAPQPQI 385
TP++ G PGL + + RAS +P+++P S+++ +P++
Sbjct: 82 TPERPRRGIPGLPDGRFHLPPRIHRASDPGLPAEEPKEKSSRKVAEPEL 130
>D78586-1|BAA11423.1| 2225|Homo sapiens multifunctional protein CAD
protein.
Length = 2225
Score = 29.5 bits (63), Expect = 5.3
Identities = 13/49 (26%), Positives = 27/49 (55%)
Frame = +2
Query: 239 TPQQMSGGSPGLGSHMHVMEVKESRASPLPVPSQQPNATSTQQAPQPQI 385
TP++ G PGL + + RAS +P+++P S+++ +P++
Sbjct: 1833 TPERPRRGIPGLPDGRFHLPPRIHRASDPGLPAEEPKEKSSRKVAEPEL 1881
>BC131622-1|AAI31623.1| 397|Homo sapiens LIM homeobox 9 protein.
Length = 397
Score = 29.5 bits (63), Expect = 5.3
Identities = 23/76 (30%), Positives = 31/76 (40%), Gaps = 6/76 (7%)
Frame = +2
Query: 227 CERRTPQQMSGGSPGLGSHMHVMEVKESRASPLP--VPSQQPNATSTQQAP----QPQIC 388
C R P + G G G +ME E R+ Q N P +P +C
Sbjct: 13 CPFRPPAMLFHGISG-GHIQGIMEEMERRSKTEARLAKGAQLNGRDAGMPPLSPEKPALC 71
Query: 389 AGCSKVITERYLLKAL 436
AGC I++RY L A+
Sbjct: 72 AGCGGKISDRYYLLAV 87
>BC065510-1|AAH65510.1| 2225|Homo sapiens carbamoyl-phosphate
synthetase 2, aspartate transcarbamylase, and
dihydroorotas protein.
Length = 2225
Score = 29.5 bits (63), Expect = 5.3
Identities = 13/49 (26%), Positives = 27/49 (55%)
Frame = +2
Query: 239 TPQQMSGGSPGLGSHMHVMEVKESRASPLPVPSQQPNATSTQQAPQPQI 385
TP++ G PGL + + RAS +P+++P S+++ +P++
Sbjct: 1833 TPERPRRGIPGLPDGRFHLPPRIHRASDPGLPAEEPKEKSSRKVAEPEL 1881
>BC014178-1|AAH14178.2| 851|Homo sapiens CAD protein protein.
Length = 851
Score = 29.5 bits (63), Expect = 5.3
Identities = 13/49 (26%), Positives = 27/49 (55%)
Frame = +2
Query: 239 TPQQMSGGSPGLGSHMHVMEVKESRASPLPVPSQQPNATSTQQAPQPQI 385
TP++ G PGL + + RAS +P+++P S+++ +P++
Sbjct: 459 TPERPRRGIPGLPDGRFHLPPRIHRASDPGLPAEEPKEKSSRKVAEPEL 507
>BC000124-1|AAH00124.2| 325|Homo sapiens sideroflexin 3 protein.
Length = 325
Score = 29.5 bits (63), Expect = 5.3
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -1
Query: 297 SMTCMCDPKPGLPPLICCGVRLSHFMKRRP 208
S CM P +PPLI + F+KRRP
Sbjct: 235 SRICMAIPAMAIPPLIMDTLEKKDFLKRRP 264
>AY273889-1|AAP32471.2| 397|Homo sapiens LIM-homeobox 9 protein
protein.
Length = 397
Score = 29.5 bits (63), Expect = 5.3
Identities = 23/76 (30%), Positives = 31/76 (40%), Gaps = 6/76 (7%)
Frame = +2
Query: 227 CERRTPQQMSGGSPGLGSHMHVMEVKESRASPLP--VPSQQPNATSTQQAP----QPQIC 388
C R P + G G G +ME E R+ Q N P +P +C
Sbjct: 13 CPFRPPAMLFHGISG-GHIQGIMEEMERRSKTEARLAKGAQLNGRDAGMPPLSPEKPALC 71
Query: 389 AGCSKVITERYLLKAL 436
AGC I++RY L A+
Sbjct: 72 AGCGGKISDRYYLLAV 87
>AL590115-7|CAH71764.1| 330|Homo sapiens LIM homeobox 9 protein.
Length = 330
Score = 29.5 bits (63), Expect = 5.3
Identities = 23/76 (30%), Positives = 31/76 (40%), Gaps = 6/76 (7%)
Frame = +2
Query: 227 CERRTPQQMSGGSPGLGSHMHVMEVKESRASPLP--VPSQQPNATSTQQAP----QPQIC 388
C R P + G G G +ME E R+ Q N P +P +C
Sbjct: 13 CPFRPPAMLFHGISG-GHIQGIMEEMERRSKTEARLAKGAQLNGRDAGMPPLSPEKPALC 71
Query: 389 AGCSKVITERYLLKAL 436
AGC I++RY L A+
Sbjct: 72 AGCGGKISDRYYLLAV 87
>AL590115-6|CAH71763.1| 397|Homo sapiens LIM homeobox 9 protein.
Length = 397
Score = 29.5 bits (63), Expect = 5.3
Identities = 23/76 (30%), Positives = 31/76 (40%), Gaps = 6/76 (7%)
Frame = +2
Query: 227 CERRTPQQMSGGSPGLGSHMHVMEVKESRASPLP--VPSQQPNATSTQQAP----QPQIC 388
C R P + G G G +ME E R+ Q N P +P +C
Sbjct: 13 CPFRPPAMLFHGISG-GHIQGIMEEMERRSKTEARLAKGAQLNGRDAGMPPLSPEKPALC 71
Query: 389 AGCSKVITERYLLKAL 436
AGC I++RY L A+
Sbjct: 72 AGCGGKISDRYYLLAV 87
>AL133215-21|CAI10936.1| 321|Homo sapiens sideroflexin 3 protein.
Length = 321
Score = 29.5 bits (63), Expect = 5.3
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -1
Query: 297 SMTCMCDPKPGLPPLICCGVRLSHFMKRRP 208
S CM P +PPLI + F+KRRP
Sbjct: 231 SRICMAIPAMAIPPLIMDTLEKKDFLKRRP 260
>AK074707-1|BAC11151.1| 325|Homo sapiens protein ( Homo sapiens
cDNA FLJ90226 fis, clone NT2RM1000858, highly similar to
Sideroflexin 3. ).
Length = 325
Score = 29.5 bits (63), Expect = 5.3
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -1
Query: 297 SMTCMCDPKPGLPPLICCGVRLSHFMKRRP 208
S CM P +PPLI + F+KRRP
Sbjct: 235 SRICMAIPAMAIPPLIMDTLEKKDFLKRRP 264
>AC013413-1|AAY24293.1| 2151|Homo sapiens unknown protein.
Length = 2151
Score = 29.5 bits (63), Expect = 5.3
Identities = 13/49 (26%), Positives = 27/49 (55%)
Frame = +2
Query: 239 TPQQMSGGSPGLGSHMHVMEVKESRASPLPVPSQQPNATSTQQAPQPQI 385
TP++ G PGL + + RAS +P+++P S+++ +P++
Sbjct: 1759 TPERPRRGIPGLPDGRFHLPPRIHRASDPGLPAEEPKEKSSRKVAEPEL 1807
>X16660-1|CAA34646.1| 223|Homo sapiens p25 protein protein.
Length = 223
Score = 29.1 bits (62), Expect = 7.0
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +2
Query: 233 RRTPQQMSGGSPGLGSHMHVMEVKESRASP-LPVPSQQPNATSTQQAPQP 379
R P ++ G PG G + R P LP + QP+++S QAP P
Sbjct: 101 RGPPARLGGEGPGAGDRRREGPDRSPRQPPVLPAAAAQPDSSSA-QAPGP 149
>CR457174-1|CAG33455.1| 282|Homo sapiens 8D6A protein.
Length = 282
Score = 29.1 bits (62), Expect = 7.0
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = -1
Query: 357 DVALGCCDGTGSGEARDSFTSMTCMCDPKPGLPPLICCGV 238
D L C DG+ E R + C P PGL P C GV
Sbjct: 75 DRDLDCSDGSDEEECRIEPCTQKGQCPPPPGL-PCPCTGV 113
>BC113491-1|AAI13492.1| 372|Homo sapiens LIM homeobox transcription
factor 1, beta protein.
Length = 372
Score = 29.1 bits (62), Expect = 7.0
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = +2
Query: 371 PQPQICAGCSKVITERYLLK 430
P P +C GC + I++R+L++
Sbjct: 28 PHPAVCEGCQRPISDRFLMR 47
>BC112120-1|AAI12121.1| 372|Homo sapiens LIM homeobox transcription
factor 1, beta protein.
Length = 372
Score = 29.1 bits (62), Expect = 7.0
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = +2
Query: 371 PQPQICAGCSKVITERYLLK 430
P P +C GC + I++R+L++
Sbjct: 28 PHPAVCEGCQRPISDRFLMR 47
>BC069601-1|AAH69601.1| 372|Homo sapiens LIM homeobox transcription
factor 1, beta protein.
Length = 372
Score = 29.1 bits (62), Expect = 7.0
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = +2
Query: 371 PQPQICAGCSKVITERYLLK 430
P P +C GC + I++R+L++
Sbjct: 28 PHPAVCEGCQRPISDRFLMR 47
>BC069588-1|AAH69588.1| 377|Homo sapiens LMX1B protein protein.
Length = 377
Score = 29.1 bits (62), Expect = 7.0
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = +2
Query: 371 PQPQICAGCSKVITERYLLK 430
P P +C GC + I++R+L++
Sbjct: 26 PHPAVCEGCQRPISDRFLMR 45
>BC007083-1|AAH07083.1| 282|Homo sapiens CD320 molecule protein.
Length = 282
Score = 29.1 bits (62), Expect = 7.0
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = -1
Query: 357 DVALGCCDGTGSGEARDSFTSMTCMCDPKPGLPPLICCGV 238
D L C DG+ E R + C P PGL P C GV
Sbjct: 75 DRDLDCSDGSDEEECRIEPCTQKGQCPPPPGL-PCPCTGV 113
>BC000668-1|AAH00668.1| 282|Homo sapiens CD320 molecule protein.
Length = 282
Score = 29.1 bits (62), Expect = 7.0
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = -1
Query: 357 DVALGCCDGTGSGEARDSFTSMTCMCDPKPGLPPLICCGV 238
D L C DG+ E R + C P PGL P C GV
Sbjct: 75 DRDLDCSDGSDEEECRIEPCTQKGQCPPPPGL-PCPCTGV 113
>AY358420-1|AAQ88786.1| 282|Homo sapiens SGGW198 protein.
Length = 282
Score = 29.1 bits (62), Expect = 7.0
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = -1
Query: 357 DVALGCCDGTGSGEARDSFTSMTCMCDPKPGLPPLICCGV 238
D L C DG+ E R + C P PGL P C GV
Sbjct: 75 DRDLDCSDGSDEEECRIEPCTQKGQCPPPPGL-PCPCTGV 113
>AL365455-1|CAB97010.1| 282|Homo sapiens 8D6 antigen protein.
Length = 282
Score = 29.1 bits (62), Expect = 7.0
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = -1
Query: 357 DVALGCCDGTGSGEARDSFTSMTCMCDPKPGLPPLICCGV 238
D L C DG+ E R + C P PGL P C GV
Sbjct: 75 DRDLDCSDGSDEEECRIEPCTQKGQCPPPPGL-PCPCTGV 113
>AL161908-2|CAH70295.1| 372|Homo sapiens LIM homeobox transcription
factor 1, beta protein.
Length = 372
Score = 29.1 bits (62), Expect = 7.0
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = +2
Query: 371 PQPQICAGCSKVITERYLLK 430
P P +C GC + I++R+L++
Sbjct: 28 PHPAVCEGCQRPISDRFLMR 47
>AL161908-1|CAH70294.1| 402|Homo sapiens LIM homeobox transcription
factor 1, beta protein.
Length = 402
Score = 29.1 bits (62), Expect = 7.0
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = +2
Query: 371 PQPQICAGCSKVITERYLLK 430
P P +C GC + I++R+L++
Sbjct: 51 PHPAVCEGCQRPISDRFLMR 70
>AL161731-2|CAI40918.1| 372|Homo sapiens LIM homeobox transcription
factor 1, beta protein.
Length = 372
Score = 29.1 bits (62), Expect = 7.0
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = +2
Query: 371 PQPQICAGCSKVITERYLLK 430
P P +C GC + I++R+L++
Sbjct: 28 PHPAVCEGCQRPISDRFLMR 47
>AL161731-1|CAI40917.1| 402|Homo sapiens LIM homeobox transcription
factor 1, beta protein.
Length = 402
Score = 29.1 bits (62), Expect = 7.0
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = +2
Query: 371 PQPQICAGCSKVITERYLLK 430
P P +C GC + I++R+L++
Sbjct: 51 PHPAVCEGCQRPISDRFLMR 70
>AK222623-1|BAD96343.1| 282|Homo sapiens 8D6 antigen variant
protein.
Length = 282
Score = 29.1 bits (62), Expect = 7.0
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = -1
Query: 357 DVALGCCDGTGSGEARDSFTSMTCMCDPKPGLPPLICCGV 238
D L C DG+ E R + C P PGL P C GV
Sbjct: 75 DRDLDCSDGSDEEECRIEPCTQKGQCPPPPGL-PCPCTGV 113
>AF528099-1|AAO62630.1| 2948|Homo sapiens transforming acidic coiled
coil 2, long isoform protein.
Length = 2948
Score = 29.1 bits (62), Expect = 7.0
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 296 EVKESRASPLPVPSQQPNATSTQQAPQPQICA 391
E +E R P+P P Q+ +T A P++ A
Sbjct: 1084 ETQEGRQQPVPAPQQKMECRATSDAESPKLLA 1115
>AF161254-1|AAF61850.1| 282|Homo sapiens 8D6 antigen protein.
Length = 282
Score = 29.1 bits (62), Expect = 7.0
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = -1
Query: 357 DVALGCCDGTGSGEARDSFTSMTCMCDPKPGLPPLICCGV 238
D L C DG+ E R + C P PGL P C GV
Sbjct: 75 DRDLDCSDGSDEEECRIEPCTQKGQCPPPPGL-PCPCTGV 113
>AF059575-1|AAC27294.1| 379|Homo sapiens LIM homeodomain protein
protein.
Length = 379
Score = 29.1 bits (62), Expect = 7.0
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = +2
Query: 371 PQPQICAGCSKVITERYLLK 430
P P +C GC + I++R+L++
Sbjct: 28 PHPAVCEGCQRPISDRFLMR 47
>AF057135-1|AAC39738.1| 372|Homo sapiens LIM homeodomain protein
LMX1B protein.
Length = 372
Score = 29.1 bits (62), Expect = 7.0
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = +2
Query: 371 PQPQICAGCSKVITERYLLK 430
P P +C GC + I++R+L++
Sbjct: 28 PHPAVCEGCQRPISDRFLMR 47
>AB126079-1|BAD20206.1| 202|Homo sapiens keratin associated protein
protein.
Length = 202
Score = 29.1 bits (62), Expect = 7.0
Identities = 14/46 (30%), Positives = 18/46 (39%)
Frame = -1
Query: 381 CGCGACCVDVALGCCDGTGSGEARDSFTSMTCMCDPKPGLPPLICC 244
CGC C + CC +G G S C C +P +CC
Sbjct: 137 CGCSQC--NCCKPCCCSSGCGSCCQSSCCNPCCCQSSCCVP--VCC 178
>BC128260-1|AAI28261.1| 657|Homo sapiens VIT protein protein.
Length = 657
Score = 28.7 bits (61), Expect = 9.3
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 284 MHVMEVKESRASPLPVPSQQPNATSTQQAPQPQ 382
M ++ V + A+P +P P+A ST P+PQ
Sbjct: 185 MQLLAVTVAVATPTTLPRPSPSAASTTSIPRPQ 217
>BC017841-1|AAH17841.1| 403|Homo sapiens ZNF365 protein protein.
Length = 403
Score = 28.7 bits (61), Expect = 9.3
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 306 NRALPRSRCHHSSLMPHLHNRLRNH 380
+R P S C+H L H H + RNH
Sbjct: 322 SRGHPHSVCNHPDLKAHFHPKGRNH 346
>AY358338-1|AAQ88704.1| 678|Homo sapiens VIT protein.
Length = 678
Score = 28.7 bits (61), Expect = 9.3
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 284 MHVMEVKESRASPLPVPSQQPNATSTQQAPQPQ 382
M ++ V + A+P +P P+A ST P+PQ
Sbjct: 185 MQLLAVTVAVATPTTLPRPSPSAASTTSIPRPQ 217
>AL135793-9|CAI95134.1| 2948|Homo sapiens transforming, acidic
coiled-coil containing protein 2 protein.
Length = 2948
Score = 28.7 bits (61), Expect = 9.3
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 296 EVKESRASPLPVPSQQPNATSTQQAPQPQICA 391
E +E R P+P P Q+ +T A P++ A
Sbjct: 1084 ETQEGRQQPVPAPQQKMECWATSDAESPKLLA 1115
>AL135793-7|CAI95132.1| 2675|Homo sapiens transforming, acidic
coiled-coil containing protein 2 protein.
Length = 2675
Score = 28.7 bits (61), Expect = 9.3
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 296 EVKESRASPLPVPSQQPNATSTQQAPQPQICA 391
E +E R P+P P Q+ +T A P++ A
Sbjct: 811 ETQEGRQQPVPAPQQKMECWATSDAESPKLLA 842
>AK056772-1|BAB71279.1| 693|Homo sapiens protein ( Homo sapiens
cDNA FLJ32210 fis, clone PLACE6003383, weakly similar to
COCHLIN PRECURSOR. ).
Length = 693
Score = 28.7 bits (61), Expect = 9.3
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 284 MHVMEVKESRASPLPVPSQQPNATSTQQAPQPQ 382
M ++ V + A+P +P P+A ST P+PQ
Sbjct: 185 MQLLAVTVAVATPTTLPRPSPSAASTTSIPRPQ 217
>AJ505147-1|CAD43726.1| 407|Homo sapiens zinc finger protein
protein.
Length = 407
Score = 28.7 bits (61), Expect = 9.3
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 306 NRALPRSRCHHSSLMPHLHNRLRNH 380
+R P S C+H L H H + RNH
Sbjct: 322 SRGHPHSVCNHPDLKSHFHPKGRNH 346
>AF063833-1|AAL18263.1| 656|Homo sapiens vitrin protein.
Length = 656
Score = 28.7 bits (61), Expect = 9.3
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 284 MHVMEVKESRASPLPVPSQQPNATSTQQAPQPQ 382
M ++ V + A+P +P P+A ST P+PQ
Sbjct: 185 MQLLAVTVAVATPTTLPRPSPSAASTTSIPRPQ 217
>AC007363-1|AAF19243.2| 693|Homo sapiens unknown protein.
Length = 693
Score = 28.7 bits (61), Expect = 9.3
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 284 MHVMEVKESRASPLPVPSQQPNATSTQQAPQPQ 382
M ++ V + A+P +P P+A ST P+PQ
Sbjct: 185 MQLLAVTVAVATPTTLPRPSPSAASTTSIPRPQ 217
>AB020651-1|BAA74867.2| 438|Homo sapiens KIAA0844 protein protein.
Length = 438
Score = 28.7 bits (61), Expect = 9.3
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 306 NRALPRSRCHHSSLMPHLHNRLRNH 380
+R P S C+H L H H + RNH
Sbjct: 353 SRGHPHSVCNHPDLKSHFHPKGRNH 377
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,668,563
Number of Sequences: 237096
Number of extensions: 1621656
Number of successful extensions: 5451
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 4998
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5447
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3545165828
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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