Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_F11
         (438 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    26   0.16 
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   2.6  
X02007-1|CAA26038.1|   70|Apis mellifera prepromelittin protein.       21   5.9  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   5.9  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   5.9  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   7.9  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   7.9  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 26.2 bits (55), Expect = 0.16
 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
 Frame = +2

Query: 281 HMHVMEVKESRASP--LPVPSQQPNATSTQQAPQPQICAGCSKVITERY 421
           H ++M  + S  SP   P P++Q  +T+T  A  PQ   G  +  T  Y
Sbjct: 728 HNYIMRGEASPRSPNASPSPAEQCASTTTITARSPQGSQGLLQCATSNY 776



 Score = 21.0 bits (42), Expect = 5.9
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 312 ALPRSRCHHSSLMPHLHNRLRN 377
           A  R    ++ L+  +HN+LRN
Sbjct: 347 AADRPGLRNTELVERMHNKLRN 368


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
            protein.
          Length = 1308

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 14/47 (29%), Positives = 21/47 (44%)
 Frame = +2

Query: 233  RRTPQQMSGGSPGLGSHMHVMEVKESRASPLPVPSQQPNATSTQQAP 373
            R    Q++G    L S    + V  S +  + +  QQP+   TQQ P
Sbjct: 1194 RMVTAQLAGKPIVLASGNKNVGVGVSNSGSVVLGKQQPSQQQTQQQP 1240


>X02007-1|CAA26038.1|   70|Apis mellifera prepromelittin protein.
          Length = 70

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +2

Query: 314 ASPLPVPSQQPNATSTQQAPQPQICAGCSKVIT 412
           A+P P P+ +P A +  +A          KV+T
Sbjct: 21  AAPEPEPAPEPEAEADAEADPEAGIGAVLKVLT 53


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -2

Query: 131 HNT*KLCSWLYSRKIFILFHNT 66
           H    L   LYS K F +F+NT
Sbjct: 104 HQAVVLFRLLYSAKTFDVFYNT 125


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -2

Query: 131 HNT*KLCSWLYSRKIFILFHNT 66
           H    L   LYS K F +F+NT
Sbjct: 104 HQAVVLFRLLYSAKTFDVFYNT 125


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 8/20 (40%), Positives = 8/20 (40%)
 Frame = +2

Query: 320 PLPVPSQQPNATSTQQAPQP 379
           P P P Q P A      P P
Sbjct: 23  PQPSPHQSPQAPQRGSPPNP 42


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 8/32 (25%), Positives = 17/32 (53%)
 Frame = +1

Query: 31  TNTPVAIAKNFSVLWNNINILREYNHEHNFYV 126
           +N    I K+  +L+N+  ++ + NH   + V
Sbjct: 207 SNQEYEIMKDNLLLYNHARLMSQDNHSKEYLV 238


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,994
Number of Sequences: 438
Number of extensions: 2708
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11327868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)