Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_F10
         (516 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC084159-9|AAK39358.1|  569|Caenorhabditis elegans Hypothetical ...    32   0.21 
AL009246-2|CAA15836.3|  362|Caenorhabditis elegans Hypothetical ...    28   3.4  
U53181-12|AAA93490.1|  134|Caenorhabditis elegans Hypothetical p...    28   4.6  
U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily as...    28   4.6  
U39855-5|AAA81084.1|  118|Caenorhabditis elegans Hypothetical pr...    28   4.6  
AF047661-6|AAC04438.2|  577|Caenorhabditis elegans Hypothetical ...    27   6.0  
Z81066-1|CAB02970.1|  919|Caenorhabditis elegans Hypothetical pr...    27   8.0  
U21317-4|AAA62523.1|  719|Caenorhabditis elegans Hypothetical pr...    27   8.0  

>AC084159-9|AAK39358.1|  569|Caenorhabditis elegans Hypothetical
           protein Y73B3A.4 protein.
          Length = 569

 Score = 32.3 bits (70), Expect = 0.21
 Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
 Frame = +2

Query: 62  ETLVNLY-GPTREYRRQEDRVYSSPKTQTQSASINDQIEREIIIDSLFVKHLSPNNGQTK 238
           E L NL     +  + +ED +Y S  ++++ A  +D +++  +  + F+KHLS +    K
Sbjct: 163 EILKNLQISKEKAIKTEEDIIYLSSDSESEDAERDDFLQKSNVSQANFIKHLSKDRAHLK 222


>AL009246-2|CAA15836.3|  362|Caenorhabditis elegans Hypothetical
           protein C47F8.2 protein.
          Length = 362

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = +2

Query: 200 FVKHLSPNNGQTKNIQRVTTVDPMVTTTAATNGDRRHCQCVPYDHC 337
           +VK + P   + KNI ++ +++ ++ T A  NG      CV   HC
Sbjct: 157 YVKQVEPEKKELKNILQIKSINDLMITCAYDNGSAME-SCV---HC 198


>U53181-12|AAA93490.1|  134|Caenorhabditis elegans Hypothetical
           protein F36D4.6 protein.
          Length = 134

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 14/53 (26%), Positives = 27/53 (50%)
 Frame = +2

Query: 104 RQEDRVYSSPKTQTQSASINDQIEREIIIDSLFVKHLSPNNGQTKNIQRVTTV 262
           RQ   +YSSP   +  A+ N ++ER  I   L +  ++  +G+ + + R   +
Sbjct: 29  RQTVFIYSSPPVNSSMATDNVRLERMEIGMQLLLLRMAEKDGEAEKLARAELI 81


>U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 77 protein.
          Length = 1004

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
 Frame = +2

Query: 56  SDETLVNLYGPTREYRRQED-RVYSSPKTQ---TQSASINDQIEREIIIDSLFVKHLSPN 223
           SDE  +N     R +R ++D      PK +   T  A+ + +I  E+  + LFV+    N
Sbjct: 199 SDEESMNSEKHLRRHRHEDDFDELPLPKNERKTTTVAATHSEIMNEM--EHLFVRGGKKN 256

Query: 224 NGQTKNIQRVTTVDPMVTTTAATNGDRR 307
           NG  K  +R + +D + +       +R+
Sbjct: 257 NGVHKQQRRQSNIDEIPSDVGKLRDNRK 284


>U39855-5|AAA81084.1|  118|Caenorhabditis elegans Hypothetical
           protein F18G5.1 protein.
          Length = 118

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = +2

Query: 80  YGPTREYRRQEDRVYSSPKTQTQSASIND 166
           YGP R+Y   E+   SS + +T++ S+ +
Sbjct: 56  YGPNRQYSDDENETLSSDEKETENFSVQN 84


>AF047661-6|AAC04438.2|  577|Caenorhabditis elegans Hypothetical
           protein M70.5 protein.
          Length = 577

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 13/57 (22%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
 Frame = +2

Query: 107 QEDRVYSSPKTQTQSASI--NDQIEREIIIDSLFVKHLSPNNGQTKNIQRVTTVDPM 271
           +ED +Y S  ++++ A    +D +++  +  + F+KHLS +    K +++++ + P+
Sbjct: 182 EEDIIYLSSDSESEDAEAERDDFLQKSNVSQANFIKHLSKDRAHLK-MKKLSKMPPV 237


>Z81066-1|CAB02970.1|  919|Caenorhabditis elegans Hypothetical
           protein F17B5.2 protein.
          Length = 919

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
 Frame = -3

Query: 268 WVNCCNSLNVLRLPIIRT*VFYE*TVDYNFSFDLVIYTGAL-CLGFRAAINPVFL 107
           W + CN+LN  R    +    Y+ T+  N S+   I+   + C      I  VFL
Sbjct: 662 WTDICNNLNNYRNKTPQNPSIYKSTIMINVSYSSCIFLKLIACFSLLVPIATVFL 716


>U21317-4|AAA62523.1|  719|Caenorhabditis elegans Hypothetical
           protein B0495.2 protein.
          Length = 719

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -3

Query: 118 PVFLPAIFTCRPIEIYQCFVR 56
           PVF P +  CR I+ Y+C  R
Sbjct: 341 PVFYPGLMGCRNIDEYECVNR 361


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,778,048
Number of Sequences: 27780
Number of extensions: 218694
Number of successful extensions: 553
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 536
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 551
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)