Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_F09
(506 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL731568-1|CAH73047.1| 198|Homo sapiens chromosome 10 open read... 58 1e-08
AF267860-1|AAG44729.1| 198|Homo sapiens CDA017 protein. 58 1e-08
AK223110-1|BAD96830.1| 255|Homo sapiens small nuclear ribonucle... 37 0.035
X13482-1|CAA31838.1| 255|Homo sapiens protein ( Human mRNA for ... 36 0.081
BC071717-1|AAH71717.1| 255|Homo sapiens small nuclear ribonucle... 36 0.081
BC022816-1|AAH22816.1| 255|Homo sapiens small nuclear ribonucle... 36 0.081
AL078621-9|CAB81646.1| 255|Homo sapiens protein ( G islands. ).). 36 0.081
AK223070-1|BAD96790.1| 255|Homo sapiens small nuclear ribonucle... 36 0.081
U53209-1|AAC50658.1| 282|Homo sapiens transformer-2 alpha protein. 29 9.3
BC017094-1|AAH17094.1| 282|Homo sapiens transformer-2 alpha pro... 29 9.3
AJ291390-1|CAC19572.1| 901|Homo sapiens MUC3B mucin protein. 29 9.3
AC023105-1|AAQ96870.1| 282|Homo sapiens unknown protein. 29 9.3
AB097048-1|BAC77401.1| 282|Homo sapiens putative MAPK activatin... 29 9.3
AB038783-1|BAB12117.1| 878|Homo sapiens intestinal mucin protein. 29 9.3
AB038781-1|BAB12115.1| 878|Homo sapiens intestinal mucin protein. 29 9.3
>AL731568-1|CAH73047.1| 198|Homo sapiens chromosome 10 open reading
frame 11 protein.
Length = 198
Score = 58.4 bits (135), Expect = 1e-08
Identities = 28/75 (37%), Positives = 49/75 (65%)
Frame = +2
Query: 11 FRYFMIYEMPNLRFLDSRRVSSKERKEAEVRGEFMRIRRPPDTTHVSPMISNATGTQARP 190
+R F++Y++PNL+FLD+++V+ +ER+EA VRG FM++ +P + S ++++ P
Sbjct: 104 YRCFVLYKLPNLKFLDAQKVTRQEREEALVRGVFMKVVKPKAS---SEDVASSPERHYTP 160
Query: 191 LPLDLTSLGKHKGAL 235
LP L H+G L
Sbjct: 161 LPSASRELTSHQGVL 175
>AF267860-1|AAG44729.1| 198|Homo sapiens CDA017 protein.
Length = 198
Score = 58.4 bits (135), Expect = 1e-08
Identities = 28/75 (37%), Positives = 49/75 (65%)
Frame = +2
Query: 11 FRYFMIYEMPNLRFLDSRRVSSKERKEAEVRGEFMRIRRPPDTTHVSPMISNATGTQARP 190
+R F++Y++PNL+FLD+++V+ +ER+EA VRG FM++ +P + S ++++ P
Sbjct: 104 YRCFVLYKLPNLKFLDAQKVTRQEREEALVRGVFMKVVKPKAS---SEDVASSPERHYTP 160
Query: 191 LPLDLTSLGKHKGAL 235
LP L H+G L
Sbjct: 161 LPSASRELTSHQGVL 175
>AK223110-1|BAD96830.1| 255|Homo sapiens small nuclear
ribonucleoprotein polypeptide A' variant protein.
Length = 255
Score = 37.1 bits (82), Expect = 0.035
Identities = 15/29 (51%), Positives = 23/29 (79%)
Frame = +2
Query: 11 FRYFMIYEMPNLRFLDSRRVSSKERKEAE 97
+R ++IY++P +R LD +RV KER+EAE
Sbjct: 131 YRLYVIYKVPQVRVLDFQRVKLKERQEAE 159
>X13482-1|CAA31838.1| 255|Homo sapiens protein ( Human mRNA for U2
snRNP-specific A' protein. ).
Length = 255
Score = 35.9 bits (79), Expect = 0.081
Identities = 14/29 (48%), Positives = 23/29 (79%)
Frame = +2
Query: 11 FRYFMIYEMPNLRFLDSRRVSSKERKEAE 97
+R ++IY++P +R LD ++V KER+EAE
Sbjct: 131 YRLYVIYKVPQVRVLDFQKVKLKERQEAE 159
>BC071717-1|AAH71717.1| 255|Homo sapiens small nuclear
ribonucleoprotein polypeptide A' protein.
Length = 255
Score = 35.9 bits (79), Expect = 0.081
Identities = 14/29 (48%), Positives = 23/29 (79%)
Frame = +2
Query: 11 FRYFMIYEMPNLRFLDSRRVSSKERKEAE 97
+R ++IY++P +R LD ++V KER+EAE
Sbjct: 131 YRLYVIYKVPQVRVLDFQKVKLKERQEAE 159
>BC022816-1|AAH22816.1| 255|Homo sapiens small nuclear
ribonucleoprotein polypeptide A' protein.
Length = 255
Score = 35.9 bits (79), Expect = 0.081
Identities = 14/29 (48%), Positives = 23/29 (79%)
Frame = +2
Query: 11 FRYFMIYEMPNLRFLDSRRVSSKERKEAE 97
+R ++IY++P +R LD ++V KER+EAE
Sbjct: 131 YRLYVIYKVPQVRVLDFQKVKLKERQEAE 159
>AL078621-9|CAB81646.1| 255|Homo sapiens protein ( G islands. ).).
Length = 255
Score = 35.9 bits (79), Expect = 0.081
Identities = 14/29 (48%), Positives = 23/29 (79%)
Frame = +2
Query: 11 FRYFMIYEMPNLRFLDSRRVSSKERKEAE 97
+R ++IY++P +R LD ++V KER+EAE
Sbjct: 131 YRLYVIYKVPQVRVLDFQKVKLKERQEAE 159
>AK223070-1|BAD96790.1| 255|Homo sapiens small nuclear
ribonucleoprotein polypeptide A' variant protein.
Length = 255
Score = 35.9 bits (79), Expect = 0.081
Identities = 14/29 (48%), Positives = 23/29 (79%)
Frame = +2
Query: 11 FRYFMIYEMPNLRFLDSRRVSSKERKEAE 97
+R ++IY++P +R LD ++V KER+EAE
Sbjct: 131 YRLYVIYKVPQVRVLDFQKVKLKERQEAE 159
>U53209-1|AAC50658.1| 282|Homo sapiens transformer-2 alpha protein.
Length = 282
Score = 29.1 bits (62), Expect = 9.3
Identities = 23/71 (32%), Positives = 30/71 (42%)
Frame = +2
Query: 47 RFLDSRRVSSKERKEAEVRGEFMRIRRPPDTTHVSPMISNATGTQARPLPLDLTSLGKHK 226
R+ SR S R+ + R RR +H SPM + T +R P T LG
Sbjct: 67 RYTRSRSHSHSHRRRSRSRSYTPEYRRRRSRSH-SPMSNRRRHTGSRANPDPNTCLGVFG 125
Query: 227 GALYYKSRKLR 259
+LY R LR
Sbjct: 126 LSLYTTERDLR 136
>BC017094-1|AAH17094.1| 282|Homo sapiens transformer-2 alpha
protein.
Length = 282
Score = 29.1 bits (62), Expect = 9.3
Identities = 23/71 (32%), Positives = 30/71 (42%)
Frame = +2
Query: 47 RFLDSRRVSSKERKEAEVRGEFMRIRRPPDTTHVSPMISNATGTQARPLPLDLTSLGKHK 226
R+ SR S R+ + R RR +H SPM + T +R P T LG
Sbjct: 67 RYTRSRSHSHSHRRRSRSRSYTPEYRRRRSRSH-SPMSNRRRHTGSRANPDPNTCLGVFG 125
Query: 227 GALYYKSRKLR 259
+LY R LR
Sbjct: 126 LSLYTTERDLR 136
>AJ291390-1|CAC19572.1| 901|Homo sapiens MUC3B mucin protein.
Length = 901
Score = 29.1 bits (62), Expect = 9.3
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 137 TTHVSPMISNATGTQARPLPLDLT 208
TT P++ +ATGTQ P+P +T
Sbjct: 155 TTQAPPVLMSATGTQTSPVPTTVT 178
>AC023105-1|AAQ96870.1| 282|Homo sapiens unknown protein.
Length = 282
Score = 29.1 bits (62), Expect = 9.3
Identities = 23/71 (32%), Positives = 30/71 (42%)
Frame = +2
Query: 47 RFLDSRRVSSKERKEAEVRGEFMRIRRPPDTTHVSPMISNATGTQARPLPLDLTSLGKHK 226
R+ SR S R+ + R RR +H SPM + T +R P T LG
Sbjct: 67 RYTRSRSHSHSHRRRSRSRSYTPEYRRRRSRSH-SPMSNRRRHTGSRANPDPNTCLGVFG 125
Query: 227 GALYYKSRKLR 259
+LY R LR
Sbjct: 126 LSLYTTERDLR 136
>AB097048-1|BAC77401.1| 282|Homo sapiens putative MAPK activating
protein protein.
Length = 282
Score = 29.1 bits (62), Expect = 9.3
Identities = 23/71 (32%), Positives = 30/71 (42%)
Frame = +2
Query: 47 RFLDSRRVSSKERKEAEVRGEFMRIRRPPDTTHVSPMISNATGTQARPLPLDLTSLGKHK 226
R+ SR S R+ + R RR +H SPM + T +R P T LG
Sbjct: 67 RYTRSRSHSHSHRRRSRSRSYTPEYRRRRSRSH-SPMSNRRRHTGSRANPDPNTCLGVFG 125
Query: 227 GALYYKSRKLR 259
+LY R LR
Sbjct: 126 LSLYTTERDLR 136
>AB038783-1|BAB12117.1| 878|Homo sapiens intestinal mucin protein.
Length = 878
Score = 29.1 bits (62), Expect = 9.3
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 137 TTHVSPMISNATGTQARPLPLDLT 208
TT P++ +ATGTQ P+P +T
Sbjct: 132 TTQAPPVLMSATGTQTSPVPTTVT 155
>AB038781-1|BAB12115.1| 878|Homo sapiens intestinal mucin protein.
Length = 878
Score = 29.1 bits (62), Expect = 9.3
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 137 TTHVSPMISNATGTQARPLPLDLT 208
TT P++ +ATGTQ P+P +T
Sbjct: 132 TTQAPPVLMSATGTQTSPVPTTVT 155
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,052,145
Number of Sequences: 237096
Number of extensions: 1522100
Number of successful extensions: 3394
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3290
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3394
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4706589866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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