Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_F09
         (506 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    21   5.6  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   5.6  
AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    21   7.3  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   7.3  
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    21   7.3  
AB086196-1|BAD06465.1|  289|Apis mellifera Period protein.             21   7.3  
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    21   7.3  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       21   9.7  

>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +1

Query: 280 GLLALSTISIKDIFRFFYFHTYSS 351
           G+L L+   I++  R  YFH+ +S
Sbjct: 247 GILGLALGPIRNNDRILYFHSLAS 270


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -1

Query: 419 IRQTGKGQLRRTYLDQREH 363
           I   GKG ++  +L++REH
Sbjct: 582 IEVKGKGIMKTYWLEKREH 600


>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +2

Query: 278 LVSWHSVPLVLKISFVSSTFIHTRRLRVHVLSGR 379
           L+SW    +V  ++ + S    T R R+ + SGR
Sbjct: 213 LISWGIAQVVTTVAGIVSYPFDTVRRRMMMQSGR 246


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +2

Query: 68  VSSKERKEAEVRGEFMRIRRPPDTTHVSPMIS 163
           V  + ++E  +R E   I  PP +  VSP+ S
Sbjct: 417 VEEERQREYGIRVERDPILTPPSSNPVSPVPS 448


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +2

Query: 278 LVSWHSVPLVLKISFVSSTFIHTRRLRVHVLSGR 379
           L+SW    +V  ++ + S    T R R+ + SGR
Sbjct: 213 LISWGIAQVVTTVAGIVSYPFDTVRRRMMMQSGR 246


>AB086196-1|BAD06465.1|  289|Apis mellifera Period protein.
          Length = 289

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/34 (23%), Positives = 16/34 (47%)
 Frame = +2

Query: 128 PPDTTHVSPMISNATGTQARPLPLDLTSLGKHKG 229
           PP+    +  +   +  + +P  +D T  G+H G
Sbjct: 98  PPEAVSYNVAVPTKSILEKKPELVDATDPGEHNG 131


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +3

Query: 387 SPKLTLTGLPNHPHLINLFRKSSIIHR 467
           S ++T +    HP +    R +S++HR
Sbjct: 156 SKRITASEALKHPWICQRERVASVVHR 182


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = -1

Query: 488 SGFVHTGXMNDRRFTKQIYKVRVIRQTGKGQLR 390
           SG ++    ND  + +   K   I +TG+G+ R
Sbjct: 52  SGTINESEFNDENYWQCNDKKTDIEETGRGKGR 84


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,338
Number of Sequences: 438
Number of extensions: 3114
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13986774
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)