Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_F09
(506 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g02290.1 68414.m00171 expressed protein 29 1.8
At3g43300.1 68416.m04570 guanine nucleotide exchange family prot... 28 4.2
At5g62330.1 68418.m07824 expressed protein 27 5.5
At2g23100.1 68415.m02756 DC1 domain-containing protein contains ... 27 5.5
At1g70080.1 68414.m08063 terpene synthase/cyclase family protein... 27 5.5
At3g12980.1 68416.m01617 histone acetyltransferase 5 (HAC5) iden... 27 7.3
At2g48010.1 68415.m06009 serine/threonine protein kinase (RFK3) ... 27 9.6
At1g72080.1 68414.m08332 hypothetical protein 27 9.6
At1g16710.1 68414.m02003 TAZ zinc finger family protein / zinc f... 27 9.6
At1g13520.1 68414.m01585 expressed protein 27 9.6
>At1g02290.1 68414.m00171 expressed protein
Length = 443
Score = 29.1 bits (62), Expect = 1.8
Identities = 16/59 (27%), Positives = 26/59 (44%)
Frame = +2
Query: 41 NLRFLDSRRVSSKERKEAEVRGEFMRIRRPPDTTHVSPMISNATGTQARPLPLDLTSLG 217
NL+ LD RV SKE A R + + +P + + +G+ L + +T G
Sbjct: 177 NLKLLDLNRVPSKEMDSATCRFKTPNVVKPVERNRSKSLTFPRSGSSKNSLKIKITKEG 235
>At3g43300.1 68416.m04570 guanine nucleotide exchange family protein
similar to SP|Q9Y6D5 Brefeldin A-inhibited guanine
nucleotide-exchange protein 2 {Homo sapiens}; contains
Pfam profile PF01369: Sec7 domain
Length = 1756
Score = 27.9 bits (59), Expect = 4.2
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +1
Query: 109 IHADXXXXXXXXRIPYDFKRNGNTSAASAPRLDIIG 216
I AD R P D K NG SA ++PR+ G
Sbjct: 1428 IEADASDSPRVDRNPDDIKDNGKVSAQASPRIGTHG 1463
>At5g62330.1 68418.m07824 expressed protein
Length = 170
Score = 27.5 bits (58), Expect = 5.5
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Frame = +2
Query: 158 ISNATGTQARPLPLDLTSLG--KHKGALYYKSRKLRMRLPAILVSWHSVPLVLK 313
+S++ T R LPL L G +H+G +YKS KL +I + ++VP+ ++
Sbjct: 1 MSSSLSTPLRLLPLLLRPHGCHRHRGRNFYKSTKLH----SIFLQSYNVPIPVR 50
>At2g23100.1 68415.m02756 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 711
Score = 27.5 bits (58), Expect = 5.5
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +3
Query: 381 IRSPKLTLTGLPNHPHLINLF 443
I+ P LT+T L +H H++ LF
Sbjct: 252 IKPPPLTITHLKSHSHILTLF 272
>At1g70080.1 68414.m08063 terpene synthase/cyclase family protein
similar to (+)-delta-cadinene synthase [Gossypium
hirsutum][GI:8389329], sesquiterpene synthases
[GI:11934937][Lycopersicon hirsutum],
[GI:11934933][Lycopersicon esculentum]; contains Pfam
profile: PF01397: Terpene synthase family
Length = 611
Score = 27.5 bits (58), Expect = 5.5
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = -1
Query: 455 RRFTKQIYKVRVIRQTGKGQLRRTYLDQREHVPLTDEYVXXXXXXKISLILMVLS 291
R FT Q Y +R KG L+ R H+P +EY+ +L+ ++
Sbjct: 420 RSFTMQ-YAYEQLRILMKGYLQEAEWSNRGHLPSHEEYIEVGVASTAGEVLLAMT 473
>At3g12980.1 68416.m01617 histone acetyltransferase 5 (HAC5) identical
to HAC5 (GI:21105780) [Arabidopsis thaliana]; similar to
CREB-binding protein GB:S39162 from [Homo sapiens]
Length = 1670
Score = 27.1 bits (57), Expect = 7.3
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -2
Query: 103 SYLSFLTFFRRNSTRIQEP*IRHFVYHEI 17
SYL + +FR + + +R FVYHEI
Sbjct: 1182 SYLDSVKYFRPDVRTVSGEALRTFVYHEI 1210
>At2g48010.1 68415.m06009 serine/threonine protein kinase (RFK3)
identical to receptor-like serine/threonine kinase
[Arabidopsis thaliana] gi|2465927|gb|AAC50045
Length = 617
Score = 26.6 bits (56), Expect = 9.6
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +2
Query: 275 ILVSWHSVPLVLKISFVSSTFIHTRRLRVHVLSGRDT 385
+LVS SV LV + +++ F + RR + +L RDT
Sbjct: 213 VLVSSFSVLLVASVLVITAWFWYCRRKKSKLLKPRDT 249
>At1g72080.1 68414.m08332 hypothetical protein
Length = 243
Score = 26.6 bits (56), Expect = 9.6
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = +1
Query: 217 QTQRCFIL*VPQIANAPARH-FGL 285
Q QRC +L +P I+N RH +GL
Sbjct: 12 QPQRCVVLALPAISNTSLRHRYGL 35
>At1g16710.1 68414.m02003 TAZ zinc finger family protein / zinc finger
(ZZ type) family protein contains Pfam profiles PF02135:
TAZ zinc finger, PF00569: Zinc finger, ZZ type
Length = 1706
Score = 26.6 bits (56), Expect = 9.6
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = -2
Query: 124 TNPHEFPSYLSFLT---FFRRNSTRIQEP*IRHFVYHEI 17
+NP++ YLS+L +FR + +R FVYHEI
Sbjct: 1201 SNPNQRRVYLSYLDSVKYFRPDIKSANGEALRTFVYHEI 1239
>At1g13520.1 68414.m01585 expressed protein
Length = 387
Score = 26.6 bits (56), Expect = 9.6
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -1
Query: 431 KVRVIRQTGKGQLRRTYLDQREHVPLTDE 345
K+ V +TG G RR+Y DQ +P+ D+
Sbjct: 61 KLTVTYRTGTGNDRRSYHDQVLFIPVLDQ 89
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,088,242
Number of Sequences: 28952
Number of extensions: 223707
Number of successful extensions: 563
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 540
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 563
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 908059136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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