Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_F08
(545 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0824 - 32243495-32244319,32244449-32244859 64 5e-11
01_01_1152 + 9170628-9171899 53 2e-07
11_01_0771 + 6453130-6454488 48 6e-06
11_01_0767 + 6438648-6438809,6439146-6440000 47 1e-05
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 47 1e-05
03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869 46 1e-05
11_01_0750 - 6315126-6315896,6316371-6316784 46 2e-05
11_02_0011 - 7337618-7338496,7338596-7338991 43 1e-04
04_04_0619 + 26652923-26653267,26653440-26654273 42 2e-04
11_02_0012 - 7346282-7347136,7347234-7347593 40 0.002
11_02_0014 - 7352619-7352918,7353173-7353418 38 0.004
03_05_0294 + 22855503-22855946,22856346-22856399 32 0.26
09_02_0338 + 7426999-7428322,7428390-7428646 29 1.8
10_08_1040 + 22503641-22503681,22503838-22504299,22506952-225073... 29 2.4
02_05_0043 - 25366965-25368211,25368555-25369070,25369185-25370091 29 3.2
10_08_0960 - 21853010-21853282,21854078-21854449,21854555-218548... 28 4.2
08_02_0095 - 12285976-12286037,12286111-12287229,12287494-122886... 28 4.2
08_01_0978 + 9841441-9842169,9842303-9842590,9842768-9843612,984... 28 5.6
03_06_0584 + 34909800-34910261 28 5.6
10_01_0007 - 79867-79950,80258-80303,80409-80641,80765-80836,811... 27 7.4
12_01_1080 + 11241590-11241625,11241723-11242018,11242113-112422... 27 9.8
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 64.5 bits (150), Expect = 5e-11
Identities = 46/170 (27%), Positives = 73/170 (42%), Gaps = 10/170 (5%)
Frame = +1
Query: 61 DKNVVSSPLGVMMLMLLYKAGAGEGSRAEIDKFLG--NGDYSGVANPYISLSKTFSEMNP 234
DKN+ SPL + + L AGA + +I FLG G +++L + P
Sbjct: 31 DKNLAVSPLSLHAALALLGAGARGETLDQIIAFLGPAGGPAHAALASHVALCSLADDSGP 90
Query: 235 D------YFTMANKIYVGNKYTLDEKFT-ITVRQYQSEVETIDFSDT-KKAADIINQWAN 390
AN ++V L + + +Y++E + F D ++A IN+W
Sbjct: 91 GDDRGGPKVRFANGVWVDAALRLKAAYARVVADKYRAEARPVSFRDKLEEARREINEWFE 150
Query: 391 EKTRGHIKSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETKEKDFML 540
T G IK + D +D A L N ++F+G W F+A T + F L
Sbjct: 151 SATAGRIKDFLPKDAVDRATPAVLGNALYFKGDWESKFDARSTSDDVFYL 200
>01_01_1152 + 9170628-9171899
Length = 423
Score = 52.8 bits (121), Expect = 2e-07
Identities = 38/162 (23%), Positives = 72/162 (44%), Gaps = 3/162 (1%)
Frame = +1
Query: 64 KNVVSSPLGVMMLMLLYKAGAGEGSRAEIDKFLGNGDYSGV-ANPYISLSKTFSEMNPDY 240
+N + SPL + L GA ++ E+ FLG+ + + +P L +
Sbjct: 59 RNFIVSPLSFHAALALVADGARGETQRELLGFLGSPSLAELHRSPTTRLVARLRHLPNTS 118
Query: 241 FTMANKIYVGNKYTLDEKFT-ITVRQYQSEVETIDFS-DTKKAADIINQWANEKTRGHIK 414
F ++V L +F +Y + E DF+ ++A + +N + ++ T G I+
Sbjct: 119 FACG--VWVDRGRALTPEFADAAASRYAAVAEPADFATQPEQARERVNAFVSDATEGLIR 176
Query: 415 SPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETKEKDFML 540
+ +++D + L N + F+G W +PF+ S T F L
Sbjct: 177 DVLPPNSVDSSTVVVLANAVHFKGTWSLPFHPSATFHAPFHL 218
>11_01_0771 + 6453130-6454488
Length = 452
Score = 47.6 bits (108), Expect = 6e-06
Identities = 22/60 (36%), Positives = 31/60 (51%)
Frame = +1
Query: 355 KKAADIINQWANEKTRGHIKSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETKEKDF 534
++A IN WA T I + ++ P A L N I+F+G W PFN S+T+ K F
Sbjct: 171 EEARKQINAWARRATGKLITDVLPPRSVGPETAVVLGNAIYFKGKWDRPFNESDTERKPF 230
>11_01_0767 + 6438648-6438809,6439146-6440000
Length = 338
Score = 46.8 bits (106), Expect = 1e-05
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +1
Query: 307 VRQYQSEVETIDFSDTK-KAADIINQWANEKTRGHIKSPISDDTIDPNAAAALFNVIFFQ 483
V Y+ T+DF + +A IN W T+ I I ++ + + N I+F+
Sbjct: 39 VGTYKGAASTVDFKNHPVEARKEINAWVARATKNLITEVIKPESQSVDTRHVVGNAIYFK 98
Query: 484 GHWHVPFNASETKEKDF 534
G W PF+ S+T E++F
Sbjct: 99 GEWLAPFDKSDTAEREF 115
>03_05_0293 +
22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 46.8 bits (106), Expect = 1e-05
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Frame = +1
Query: 331 ETIDFSDTKKAADI---INQWANEKTRGHIKSPISDDTIDPNAAAALFNVIFFQGHWHVP 501
E I + KAA++ +N W + T G IK + ++D L N ++F+G W
Sbjct: 200 EPITHWTSGKAAEVASQVNSWVEKVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAWTEK 259
Query: 502 FNASETKEKDFML 540
F+AS+TK+ +F L
Sbjct: 260 FDASKTKDGEFHL 272
Score = 43.2 bits (97), Expect = 1e-04
Identities = 21/92 (22%), Positives = 42/92 (45%)
Frame = +1
Query: 265 VGNKYTLDEKFTITVRQYQSEVETIDFSDTKKAADIINQWANEKTRGHIKSPISDDTIDP 444
+ + D F +++ + V + +N W + T G IK+ + +I+
Sbjct: 433 IAEDFVADHPFLFLIQEDMTGVVLFVGHVAAEVLGQVNSWVDRVTSGLIKNIATPRSINH 492
Query: 445 NAAAALFNVIFFQGHWHVPFNASETKEKDFML 540
N L N ++F+G W F+ S+T++ +F L
Sbjct: 493 NTKLVLANALYFKGAWAEKFDVSKTEDGEFHL 524
Score = 33.5 bits (73), Expect = 0.11
Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Frame = +1
Query: 64 KNVVSSPLGVMMLMLLYKAGAGEGSRAEIDKFLGN-GDYSGV---ANPYISL-SKTFSEM 228
+NV SPL + + + L AGAG +R ++ LG G G+ A + L S
Sbjct: 35 RNVAFSPLSLHVALSLVAAGAGGATRDQLASALGGPGSAEGLHAFAEQLVQLVLADASGA 94
Query: 229 NPDYFTMANKIYVGNKYTLDEKF-TITVRQYQSEVETIDF 345
A+ ++V +L + F + V +Y++E ++DF
Sbjct: 95 GGPRVAFADGVFVDASLSLKKTFGDVAVGKYKAETHSVDF 134
>03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869
Length = 258
Score = 46.4 bits (105), Expect = 1e-05
Identities = 20/61 (32%), Positives = 33/61 (54%)
Frame = +1
Query: 358 KAADIINQWANEKTRGHIKSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETKEKDFM 537
+ A +N W + T G IK + ++D L N ++F+G W F+AS+TK+ +F
Sbjct: 4 EVASQVNSWVDRVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAWTEKFDASKTKDGEFR 63
Query: 538 L 540
L
Sbjct: 64 L 64
>11_01_0750 - 6315126-6315896,6316371-6316784
Length = 394
Score = 46.0 bits (104), Expect = 2e-05
Identities = 41/165 (24%), Positives = 70/165 (42%), Gaps = 11/165 (6%)
Frame = +1
Query: 73 VSSPLGVMMLMLLYKAGAGEGSRAEIDKFLG--NGDYSGVANPYISLSKTFSEMNPDYFT 246
VS+P V + + L GA +R ++ + LG G G A+ S+ + D T
Sbjct: 36 VSAP-AVHVSLALAAGGARGATRRQVLQALGCGGGGRGGAADAANVASRVVKRVLRDRST 94
Query: 247 -------MANKIYVGNKYTLDEKFT-ITVRQYQSEVETIDFSDTKK-AADIINQWANEKT 399
A ++ +L +F + Y S + DF + + A D IN W + T
Sbjct: 95 SGGPRLAFAGGVWADASRSLSPEFVGLAGNVYGSAAKKADFKNKPEDAPDQINSWVKDST 154
Query: 400 RGHIKSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETKEKDF 534
+G + + + TID N L + ++F+G W + T E+ F
Sbjct: 155 KGTVTTLLPAGTIDQNTGLVLGSALYFRGRWLDRDDLRRTTEQKF 199
>11_02_0011 - 7337618-7338496,7338596-7338991
Length = 424
Score = 43.2 bits (97), Expect = 1e-04
Identities = 40/169 (23%), Positives = 69/169 (40%), Gaps = 9/169 (5%)
Frame = +1
Query: 55 SKDKNVVSSPLGVMMLMLLYKAGAGEGSRAEIDKFLGNGDYSGVANPY-----ISLSKTF 219
S +KN+V SP + + L AGA + E+ LG + + L+
Sbjct: 28 SSNKNLVFSPASLYAALALVAAGARGTTLDELLALLGAASLDDLEESVRRAVEVGLADES 87
Query: 220 SEMNPDYFTMANKIYVGNKYTLDEK---FTITVRQYQSEVETIDFS-DTKKAADIINQWA 387
+ P +++ V + TL+ K Y++ +F K++ IN+W
Sbjct: 88 ASGGP---RVSDACGVWHDETLELKPAYRAAAAGTYKAVTRAANFQRQPKRSRKKINKWV 144
Query: 388 NEKTRGHIKSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETKEKDF 534
++ T I + D ++ + A L N I+F+G W PF S T F
Sbjct: 145 SKATNKLIPEILPDGSVHVDTALVLVNAIYFKGKWSNPFPRSSTTTGKF 193
>04_04_0619 + 26652923-26653267,26653440-26654273
Length = 392
Score = 42.3 bits (95), Expect = 2e-04
Identities = 36/167 (21%), Positives = 71/167 (42%), Gaps = 3/167 (1%)
Frame = +1
Query: 43 TYTSSKDKNVVSSPLGVMMLMLLYKAGAGEGSRAEIDKFLGNGDYSGVANPYISLSKTFS 222
T ++ N + SPLG+ + L G + ++ FLG+ + + + +
Sbjct: 13 TKAITEQSNFMFSPLGLRAGLALLATGTDGETLRQLLAFLGS---QHIHQLNAASAGLLA 69
Query: 223 EMNP-DYFTMANKIYVGNKYTLDEKFTIT-VRQYQSEVETIDFSDTKKAADI-INQWANE 393
EM + A I+V L +F T + + ++DF + AA +N++ ++
Sbjct: 70 EMRAWPQLSFAAGIFVDRSLRLRPEFQSTAAAAHGAFPRSVDFQNQANAAAAEVNRFISQ 129
Query: 394 KTRGHIKSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETKEKDF 534
T G + + IS T + L N + F+ W F + +T+ + F
Sbjct: 130 ATNGRLNNTISPGTFGSSTKCVLANAMHFKATWGRKFESYDTQRRRF 176
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +1
Query: 355 KKAADIINQWANEKTRGHIKSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETKEKDF 534
K + IN+W ++ T I+ + D ++ A L N I+F+G W PF T F
Sbjct: 122 KSSRKKINKWVSKATNKLIREILPDGSVHGGTALVLVNAIYFKGKWSNPFPRERTTTGKF 181
>11_02_0014 - 7352619-7352918,7353173-7353418
Length = 181
Score = 38.3 bits (85), Expect = 0.004
Identities = 18/62 (29%), Positives = 28/62 (45%)
Frame = +1
Query: 349 DTKKAADIINQWANEKTRGHIKSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETKEK 528
+ KK+ IN+W ++ T I + D ++ L N I+F+G W PF T
Sbjct: 82 EPKKSRKKINEWVSKATNKLIPEILPDGSVHRLTTLVLVNAIYFKGKWSDPFPRESTTTG 141
Query: 529 DF 534
F
Sbjct: 142 KF 143
>03_05_0294 + 22855503-22855946,22856346-22856399
Length = 165
Score = 32.3 bits (70), Expect = 0.26
Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 8/109 (7%)
Frame = +1
Query: 67 NVVSSPLGVMMLMLLYKAGAGEGSRAEIDKFL---GNGDYSGV---ANPYISL-SKTFSE 225
NV SPL + + + L AGAG +R ++ L G G G+ A + L S
Sbjct: 45 NVAFSPLSLHVALSLVAAGAGGATRDQLVSLLGVPGRGTAEGLHAFAEQVVQLVLADSSP 104
Query: 226 MNPDYFTMANKIYVGNKYTLDEKF-TITVRQYQSEVETIDFSDTKKAAD 369
A+ +++ + +L + F + V +Y++E ++DF TK D
Sbjct: 105 AGGPRVAFADGVFIDSSLSLMKSFKDVAVGKYKAETHSVDF-QTKVLRD 152
>09_02_0338 + 7426999-7428322,7428390-7428646
Length = 526
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = -2
Query: 142 HDYLHRRQLCTEALASSRLMVKTQHSCPSMMYTFP 38
H+YLH+ + E + +SRLMV+ +C ++ + P
Sbjct: 379 HNYLHKERNDLERIYNSRLMVQHTRNCVTLPHRNP 413
>10_08_1040 +
22503641-22503681,22503838-22504299,22506952-22507361,
22507484-22507640,22507718-22507937,22508053-22508106,
22508193-22508272,22508359-22508636,22509193-22509515,
22509590-22509853,22510453-22510860
Length = 898
Score = 29.1 bits (62), Expect = 2.4
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -2
Query: 175 NLHCLKTCRSPHDYLHRRQLCTEALASSRLMVKTQHSCPSMMYTF 41
NL+ +C H + RRQL T+ SS + +S PS Y+F
Sbjct: 799 NLNSSSSCGEEHWRMKRRQLETQQDESSYSAKQKSYSYPSTSYSF 843
>02_05_0043 - 25366965-25368211,25368555-25369070,25369185-25370091
Length = 889
Score = 28.7 bits (61), Expect = 3.2
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -2
Query: 214 FYLS*CTDWQPRYNLHCLKTC 152
+ L CTD+ P+Y HC +C
Sbjct: 296 YLLDGCTDYNPKYKEHCSTSC 316
>10_08_0960 -
21853010-21853282,21854078-21854449,21854555-21854862,
21854946-21855102
Length = 369
Score = 28.3 bits (60), Expect = 4.2
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +1
Query: 385 ANEKTRGHIKSPISDDTIDPNAAAA 459
A + RG KSP DD I+PNAAAA
Sbjct: 241 AAAQARGS-KSPEDDDNINPNAAAA 264
>08_02_0095 -
12285976-12286037,12286111-12287229,12287494-12288604,
12288695-12288757,12288851-12288913,12289268-12289318,
12289538-12289617,12290078-12290164,12290349-12290435,
12290889-12290975,12292106-12292308,12292756-12292922
Length = 1059
Score = 28.3 bits (60), Expect = 4.2
Identities = 17/85 (20%), Positives = 37/85 (43%)
Frame = -3
Query: 465 EERGSCIRIYGVIRDWRFNMSSGLLISPLINDVSCFFGIAEVNSFNFALVLTDSDREFLI 286
EE G CI R R+NM + + + +C FG A + + F + +F +
Sbjct: 625 EEYGDCISFDTTYRTNRYNMPFAPFVGVIGHGTTCLFGCAFLEA-EFESLWPQMIEKFNL 683
Query: 285 QSIFISDVDFIGHSEVIRIHLRERF 211
Q++ + + ++ + ++ + F
Sbjct: 684 QNVNYLKIMWKNRAQFVPVYFKYDF 708
>08_01_0978 +
9841441-9842169,9842303-9842590,9842768-9843612,
9843941-9844223,9844303-9844416
Length = 752
Score = 27.9 bits (59), Expect = 5.6
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +1
Query: 313 QYQSEVETIDFSDTKKA-ADIINQWANEKTRGHIKSPISDDTID-PNAA 453
++ E E + S+T++ ADI QWA R +K SD+T+ PN A
Sbjct: 188 EWDKEDEAVAESNTQQVLADIPVQWARNWARARVKKN-SDETLSFPNPA 235
>03_06_0584 + 34909800-34910261
Length = 153
Score = 27.9 bits (59), Expect = 5.6
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -1
Query: 164 PKNLSISARLPSPAPALYRSISIITPNGEDTTFLSFDDVYV 42
P + S +L A A Y+ + +ITP G++ F + DD Y+
Sbjct: 42 PSLKASSKKLDVSAMATYK-VKLITPEGQEHEFEAPDDTYI 81
>10_01_0007 -
79867-79950,80258-80303,80409-80641,80765-80836,
81135-81230,81506-81607,81684-82349
Length = 432
Score = 27.5 bits (58), Expect = 7.4
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +1
Query: 136 SRAEIDKFLGNGDYSGVANPYISLSKTFSEMNPDYFTMANKIYV-GNKYT 282
S A+ D GD V + + L+ F E++PD+ ++N +Y+ G+ Y+
Sbjct: 152 SYADTDAGFRTGDTIAVHHILVFLNNWFQEVHPDF--LSNPLYIAGDSYS 199
>12_01_1080 + 11241590-11241625,11241723-11242018,11242113-11242269,
11242381-11242449,11242551-11243480,11243868-11243906,
11244414-11244478,11244663-11244768,11244850-11245050,
11247001-11247201,11247756-11247779,11249425-11249586,
11249676-11249915,11250267-11250479,11250618-11250968,
11251041-11251193,11251649-11251858,11252049-11252267,
11252365-11252482,11252879-11253828,11254023-11254220,
11254294-11254553,11255316-11255505,11255817-11256169,
11258278-11258386,11258466-11258615,11258748-11258844,
11259315-11259415
Length = 2065
Score = 27.1 bits (57), Expect = 9.8
Identities = 30/136 (22%), Positives = 54/136 (39%), Gaps = 1/136 (0%)
Frame = +1
Query: 85 LGVMMLMLLYKAGAGEGSRAEIDKFLGNGDYSGVANPYISLSKTFSEMNPDYFTMANKIY 264
L +M+ L Y AG G + +G+ SG ++ + + + TM N
Sbjct: 643 LELMLTKLRYAAGEGNSESS-------SGEISGSSSGKMDATHGLQIIGMSA-TMPNVAA 694
Query: 265 VGNKYTLDEKFTITVRQYQSEVETIDFSDTKKAADIINQWANEKTRGHIKSPISD-DTID 441
V + DE+FT YQ+E + + K + + + + + ++D D
Sbjct: 695 VADWLQKDEEFTAQAALYQTEFRPVPLEEFIKVGNQV--FDKDMNVVRVLPKVADLGGKD 752
Query: 442 PNAAAALFNVIFFQGH 489
P+ L N + QGH
Sbjct: 753 PDHIVELCNEVVQQGH 768
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.315 0.131 0.375
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,560,605
Number of Sequences: 37544
Number of extensions: 305864
Number of successful extensions: 935
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 933
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1222086348
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)
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