Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_F08
(545 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or cys... 77 1e-14
AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin prote... 77 1e-14
AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or cys... 76 2e-14
AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin prote... 76 2e-14
U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein... 73 2e-13
AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or cys... 73 2e-13
AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or cys... 65 3e-11
AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protei... 65 3e-11
U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein ... 60 1e-09
U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein ... 60 1e-09
U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein ... 60 1e-09
AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or cys... 60 1e-09
AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or cys... 60 1e-09
AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or cys... 60 1e-09
U70851-2|AAM97996.1| 671|Caenorhabditis elegans Osmotic avoidan... 27 6.7
U70851-1|AAM97997.1| 699|Caenorhabditis elegans Osmotic avoidan... 27 6.7
D38632-1|BAA07612.1| 672|Caenorhabditis elegans OSM-3 (kinesin ... 27 6.7
AF149285-1|AAF99084.1| 672|Caenorhabditis elegans Osm-3 protein. 27 6.7
Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical pr... 27 8.8
U53149-4|AAA96120.1| 956|Caenorhabditis elegans Patched related... 27 8.8
AJ505020-1|CAD43602.1| 382|Caenorhabditis elegans alpha-1->3-fu... 27 8.8
AC006674-5|AAF39933.2| 382|Caenorhabditis elegans Fucosyl trans... 27 8.8
>AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 76.6 bits (180), Expect = 1e-14
Identities = 52/168 (30%), Positives = 87/168 (51%), Gaps = 3/168 (1%)
Frame = +1
Query: 49 TSSKDKNVVSSPLGVMMLMLLYKAGAGEGSRAEIDKFLGNGDYSGVANPYIS-LSKTFSE 225
TS + V SP+ +++ + L GA +R +I + NG + S ++K +
Sbjct: 24 TSDQLTPCVFSPVSILLSLALVHLGAKGHTRHDIRNSVVNGSTDEQFIEHFSFINKLLNS 83
Query: 226 MNPDYFTM-ANKIYVGNKYTLDEKFTITVRQ-YQSEVETIDFSDTKKAADIINQWANEKT 399
D T+ AN+++V + + + FT +R+ Y +E TIDF +++AA I+NQ+ +E T
Sbjct: 84 SVNDVETLIANRLFVSPEQAIRKAFTDELREHYNAETATIDFKKSQEAAKIMNQFISEST 143
Query: 400 RGHIKSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETKEKDFMLT 543
+G I I D + + A L N IFFQG W F E E +F ++
Sbjct: 144 KGKIPDMIKPDNL-KDVDAILINAIFFQGDWRRKF--GEPAESNFSIS 188
>AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin protein
1 protein.
Length = 366
Score = 76.6 bits (180), Expect = 1e-14
Identities = 52/168 (30%), Positives = 87/168 (51%), Gaps = 3/168 (1%)
Frame = +1
Query: 49 TSSKDKNVVSSPLGVMMLMLLYKAGAGEGSRAEIDKFLGNGDYSGVANPYIS-LSKTFSE 225
TS + V SP+ +++ + L GA +R +I + NG + S ++K +
Sbjct: 24 TSDQLTPCVFSPVSILLSLALVHLGAKGHTRHDIRNSVVNGSTDEQFIEHFSFINKLLNS 83
Query: 226 MNPDYFTM-ANKIYVGNKYTLDEKFTITVRQ-YQSEVETIDFSDTKKAADIINQWANEKT 399
D T+ AN+++V + + + FT +R+ Y +E TIDF +++AA I+NQ+ +E T
Sbjct: 84 SVNDVETLIANRLFVSPEQAIRKAFTDELREHYNAETATIDFKKSQEAAKIMNQFISEST 143
Query: 400 RGHIKSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETKEKDFMLT 543
+G I I D + + A L N IFFQG W F E E +F ++
Sbjct: 144 KGKIPDMIKPDNL-KDVDAILINAIFFQGDWRRKF--GEPAESNFSIS 188
>AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 359
Score = 75.8 bits (178), Expect = 2e-14
Identities = 49/169 (28%), Positives = 85/169 (50%), Gaps = 2/169 (1%)
Frame = +1
Query: 34 LKETYTSSKDKNVVSSPLGVMMLMLLYKAGAGEGSRAEIDKFLGNGDYSGVANPYISLSK 213
LK T +VV SPL + + + L AGA ++ E++ LG S + + L +
Sbjct: 13 LKLLATLPHSGSVVLSPLSISLGLALIHAGACGSTQKELEDVLGG---SRIFEEFSGLME 69
Query: 214 TFSEMNPDYFT-MANKIYVGNKYTLDEKFTITVRQ-YQSEVETIDFSDTKKAADIINQWA 387
+ + T + N+++V YT+ + + TV + Y++ E++DFS T++AA +N +
Sbjct: 70 AVGDTDNGVETKIVNRVFVNQAYTIHQDYLETVEKLYKASGESLDFSQTEQAAKTMNTFV 129
Query: 388 NEKTRGHIKSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETKEKDF 534
T G IK I D+ + NA A L N ++F+ W F T ++F
Sbjct: 130 ENHTNGKIKDLIPADSAN-NAFAFLVNAMYFKADWQSKFAKESTTGREF 177
>AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin protein
2 protein.
Length = 359
Score = 75.8 bits (178), Expect = 2e-14
Identities = 49/169 (28%), Positives = 85/169 (50%), Gaps = 2/169 (1%)
Frame = +1
Query: 34 LKETYTSSKDKNVVSSPLGVMMLMLLYKAGAGEGSRAEIDKFLGNGDYSGVANPYISLSK 213
LK T +VV SPL + + + L AGA ++ E++ LG S + + L +
Sbjct: 13 LKLLATLPHSGSVVLSPLSISLGLALIHAGACGSTQKELEDVLGG---SRIFEEFSGLME 69
Query: 214 TFSEMNPDYFT-MANKIYVGNKYTLDEKFTITVRQ-YQSEVETIDFSDTKKAADIINQWA 387
+ + T + N+++V YT+ + + TV + Y++ E++DFS T++AA +N +
Sbjct: 70 AVGDTDNGVETKIVNRVFVNQAYTIHQDYLETVEKLYKASGESLDFSQTEQAAKTMNTFV 129
Query: 388 NEKTRGHIKSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETKEKDF 534
T G IK I D+ + NA A L N ++F+ W F T ++F
Sbjct: 130 ENHTNGKIKDLIPADSAN-NAFAFLVNAMYFKADWQSKFAKESTTGREF 177
>U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein 6
protein.
Length = 375
Score = 72.5 bits (170), Expect = 2e-13
Identities = 47/162 (29%), Positives = 82/162 (50%), Gaps = 5/162 (3%)
Frame = +1
Query: 64 KNVVSSPLGVMM-LMLLYKAGAGEGSRAEIDKFLGNGDYSGVANPY---ISLSKTFSEMN 231
++ V SPL + + L L++ A GE +R EI K L NG + IS +E
Sbjct: 32 ESFVFSPLSIALALSLVHVAAKGE-TRDEIRKALLNGATDEELEQHFSNISAGLLVAEKG 90
Query: 232 PDYFTMANKIYVGNKYTLDEKFTITVRQ-YQSEVETIDFSDTKKAADIINQWANEKTRGH 408
+ +AN I+ +T+ + + V++ Y + ++F D + +A+ IN + +E T+GH
Sbjct: 91 TEV-NVANHIFSRKTFTIKKLYLNDVKKLYNAGASQLNFEDQEASAEAINNFVSENTKGH 149
Query: 409 IKSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETKEKDF 534
IK I+ D+I A L N +F+ +W F T +++F
Sbjct: 150 IKKIINPDSISEELVAVLTNAFYFKANWQTKFKKESTYKREF 191
>AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 375
Score = 72.5 bits (170), Expect = 2e-13
Identities = 47/162 (29%), Positives = 82/162 (50%), Gaps = 5/162 (3%)
Frame = +1
Query: 64 KNVVSSPLGVMM-LMLLYKAGAGEGSRAEIDKFLGNGDYSGVANPY---ISLSKTFSEMN 231
++ V SPL + + L L++ A GE +R EI K L NG + IS +E
Sbjct: 32 ESFVFSPLSIALALSLVHVAAKGE-TRDEIRKALLNGATDEELEQHFSNISAGLLVAEKG 90
Query: 232 PDYFTMANKIYVGNKYTLDEKFTITVRQ-YQSEVETIDFSDTKKAADIINQWANEKTRGH 408
+ +AN I+ +T+ + + V++ Y + ++F D + +A+ IN + +E T+GH
Sbjct: 91 TEV-NVANHIFSRKTFTIKKLYLNDVKKLYNAGASQLNFEDQEASAEAINNFVSENTKGH 149
Query: 409 IKSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETKEKDF 534
IK I+ D+I A L N +F+ +W F T +++F
Sbjct: 150 IKKIINPDSISEELVAVLTNAFYFKANWQTKFKKESTYKREF 191
>AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 362
Score = 65.3 bits (152), Expect = 3e-11
Identities = 46/163 (28%), Positives = 81/163 (49%), Gaps = 3/163 (1%)
Frame = +1
Query: 61 DKNVVSSPLGVMMLMLLYKAGAGEGSRAEIDKFLGNGDYSGVANPYIS-LSKTFSEMNPD 237
++++V SPL + +++ L G SR +I L +G + S +SK
Sbjct: 21 NESLVFSPLSIALVLSLVHTGVRGSSRDQIRNTLLSGATDEQLVEHFSFVSKEVKNGTKG 80
Query: 238 YFT-MANKIYVGNKYTLDEKFTIT-VRQYQSEVETIDFSDTKKAADIINQWANEKTRGHI 411
+ANK+Y+ +T++ F T ++ Y ++ +++D + T A IN + N T G I
Sbjct: 81 VEVYLANKVYLKKGFTVNPTFLSTALKNYGADAKSLDLT-TPAAVQEINSFVNTATNGKI 139
Query: 412 KSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETKEKDFML 540
K+ + D+I +A A L N I+F+ W F+ E+DF L
Sbjct: 140 KNIATQDSIK-DAIALLINSIYFKADWDDKFDGMSVSEQDFTL 181
>AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protein 3
protein.
Length = 362
Score = 65.3 bits (152), Expect = 3e-11
Identities = 46/163 (28%), Positives = 81/163 (49%), Gaps = 3/163 (1%)
Frame = +1
Query: 61 DKNVVSSPLGVMMLMLLYKAGAGEGSRAEIDKFLGNGDYSGVANPYIS-LSKTFSEMNPD 237
++++V SPL + +++ L G SR +I L +G + S +SK
Sbjct: 21 NESLVFSPLSIALVLSLVHTGVRGSSRDQIRNTLLSGATDEQLVEHFSFVSKEVKNGTKG 80
Query: 238 YFT-MANKIYVGNKYTLDEKFTIT-VRQYQSEVETIDFSDTKKAADIINQWANEKTRGHI 411
+ANK+Y+ +T++ F T ++ Y ++ +++D + T A IN + N T G I
Sbjct: 81 VEVYLANKVYLKKGFTVNPTFLSTALKNYGADAKSLDLT-TPAAVQEINSFVNTATNGKI 139
Query: 412 KSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETKEKDFML 540
K+ + D+I +A A L N I+F+ W F+ E+DF L
Sbjct: 140 KNIATQDSIK-DAIALLINSIYFKADWDDKFDGMSVSEQDFTL 181
>U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform a protein.
Length = 366
Score = 59.7 bits (138), Expect = 1e-09
Identities = 40/162 (24%), Positives = 78/162 (48%), Gaps = 5/162 (3%)
Frame = +1
Query: 64 KNVVSSPLGVMM-LMLLYKAGAGEGSRAEIDKFLGNGDYSGVANPY---ISLSKTFSEMN 231
+++ SPL + + L L++ A GE +R +I + L G + IS + +E
Sbjct: 23 ESLAFSPLSIALALSLVHVAAKGE-TRDQIREALVKGSTDEQLEQHFANISAALLAAERG 81
Query: 232 PDYFTMANKIYVGNKYTLDEKFTITVRQ-YQSEVETIDFSDTKKAADIINQWANEKTRGH 408
+ +AN ++ + + + + V++ Y + ++DF + + A+ IN + E T H
Sbjct: 82 TEV-KLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDH 140
Query: 409 IKSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETKEKDF 534
IK I D+I+ + A L N ++F+ W F T + +F
Sbjct: 141 IKKIIGSDSINSDLVAVLTNALYFKADWQNKFKKDSTFKSEF 182
>U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform b protein.
Length = 366
Score = 59.7 bits (138), Expect = 1e-09
Identities = 40/162 (24%), Positives = 78/162 (48%), Gaps = 5/162 (3%)
Frame = +1
Query: 64 KNVVSSPLGVMM-LMLLYKAGAGEGSRAEIDKFLGNGDYSGVANPY---ISLSKTFSEMN 231
+++ SPL + + L L++ A GE +R +I + L G + IS + +E
Sbjct: 23 ESLAFSPLSIALALSLVHVAAKGE-TRDQIREALVKGSTDEQLEQHFANISAALLAAERG 81
Query: 232 PDYFTMANKIYVGNKYTLDEKFTITVRQ-YQSEVETIDFSDTKKAADIINQWANEKTRGH 408
+ +AN ++ + + + + V++ Y + ++DF + + A+ IN + E T H
Sbjct: 82 TEV-KLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDH 140
Query: 409 IKSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETKEKDF 534
IK I D+I+ + A L N ++F+ W F T + +F
Sbjct: 141 IKKIIGSDSINSDLVAVLTNALYFKADWQNKFKKDSTFKSEF 182
>U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein 7,
isoform c protein.
Length = 365
Score = 59.7 bits (138), Expect = 1e-09
Identities = 40/162 (24%), Positives = 78/162 (48%), Gaps = 5/162 (3%)
Frame = +1
Query: 64 KNVVSSPLGVMM-LMLLYKAGAGEGSRAEIDKFLGNGDYSGVANPY---ISLSKTFSEMN 231
+++ SPL + + L L++ A GE +R +I + L G + IS + +E
Sbjct: 23 ESLAFSPLSIALALSLVHVAAKGE-TRDQIREALVKGSTDEQLEQHFANISAALLAAERG 81
Query: 232 PDYFTMANKIYVGNKYTLDEKFTITVRQ-YQSEVETIDFSDTKKAADIINQWANEKTRGH 408
+ +AN ++ + + + + V++ Y + ++DF + + A+ IN + E T H
Sbjct: 82 TEV-KLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDH 140
Query: 409 IKSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETKEKDF 534
IK I D+I+ + A L N ++F+ W F T + +F
Sbjct: 141 IKKIIGSDSINSDLVAVLTNALYFKADWQNKFKKDSTFKSEF 182
>AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 365
Score = 59.7 bits (138), Expect = 1e-09
Identities = 40/162 (24%), Positives = 78/162 (48%), Gaps = 5/162 (3%)
Frame = +1
Query: 64 KNVVSSPLGVMM-LMLLYKAGAGEGSRAEIDKFLGNGDYSGVANPY---ISLSKTFSEMN 231
+++ SPL + + L L++ A GE +R +I + L G + IS + +E
Sbjct: 23 ESLAFSPLSIALALSLVHVAAKGE-TRDQIREALVKGSTDEQLEQHFANISAALLAAERG 81
Query: 232 PDYFTMANKIYVGNKYTLDEKFTITVRQ-YQSEVETIDFSDTKKAADIINQWANEKTRGH 408
+ +AN ++ + + + + V++ Y + ++DF + + A+ IN + E T H
Sbjct: 82 TEV-KLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDH 140
Query: 409 IKSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETKEKDF 534
IK I D+I+ + A L N ++F+ W F T + +F
Sbjct: 141 IKKIIGSDSINSDLVAVLTNALYFKADWQNKFKKDSTFKSEF 182
>AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 59.7 bits (138), Expect = 1e-09
Identities = 40/162 (24%), Positives = 78/162 (48%), Gaps = 5/162 (3%)
Frame = +1
Query: 64 KNVVSSPLGVMM-LMLLYKAGAGEGSRAEIDKFLGNGDYSGVANPY---ISLSKTFSEMN 231
+++ SPL + + L L++ A GE +R +I + L G + IS + +E
Sbjct: 23 ESLAFSPLSIALALSLVHVAAKGE-TRDQIREALVKGSTDEQLEQHFANISAALLAAERG 81
Query: 232 PDYFTMANKIYVGNKYTLDEKFTITVRQ-YQSEVETIDFSDTKKAADIINQWANEKTRGH 408
+ +AN ++ + + + + V++ Y + ++DF + + A+ IN + E T H
Sbjct: 82 TEV-KLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDH 140
Query: 409 IKSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETKEKDF 534
IK I D+I+ + A L N ++F+ W F T + +F
Sbjct: 141 IKKIIGSDSINSDLVAVLTNALYFKADWQNKFKKDSTFKSEF 182
>AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 59.7 bits (138), Expect = 1e-09
Identities = 40/162 (24%), Positives = 78/162 (48%), Gaps = 5/162 (3%)
Frame = +1
Query: 64 KNVVSSPLGVMM-LMLLYKAGAGEGSRAEIDKFLGNGDYSGVANPY---ISLSKTFSEMN 231
+++ SPL + + L L++ A GE +R +I + L G + IS + +E
Sbjct: 23 ESLAFSPLSIALALSLVHVAAKGE-TRDQIREALVKGSTDEQLEQHFANISAALLAAERG 81
Query: 232 PDYFTMANKIYVGNKYTLDEKFTITVRQ-YQSEVETIDFSDTKKAADIINQWANEKTRGH 408
+ +AN ++ + + + + V++ Y + ++DF + + A+ IN + E T H
Sbjct: 82 TEV-KLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDH 140
Query: 409 IKSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETKEKDF 534
IK I D+I+ + A L N ++F+ W F T + +F
Sbjct: 141 IKKIIGSDSINSDLVAVLTNALYFKADWQNKFKKDSTFKSEF 182
>U70851-2|AAM97996.1| 671|Caenorhabditis elegans Osmotic avoidance
abnormal protein3, isoform a protein.
Length = 671
Score = 27.5 bits (58), Expect = 6.7
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 205 LSKTFSE-MNPDYFTMANKIYVGNKYTLDEKFTITVRQYQSEVETID 342
L+K+ SE + YF +I V NKY D+K + + + S+ T D
Sbjct: 594 LAKSDSENLANSYFKPVKQINVINKYKSDQKLSTSKSLFPSKTPTFD 640
>U70851-1|AAM97997.1| 699|Caenorhabditis elegans Osmotic avoidance
abnormal protein3, isoform b protein.
Length = 699
Score = 27.5 bits (58), Expect = 6.7
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 205 LSKTFSE-MNPDYFTMANKIYVGNKYTLDEKFTITVRQYQSEVETID 342
L+K+ SE + YF +I V NKY D+K + + + S+ T D
Sbjct: 622 LAKSDSENLANSYFKPVKQINVINKYKSDQKLSTSKSLFPSKTPTFD 668
>D38632-1|BAA07612.1| 672|Caenorhabditis elegans OSM-3 (kinesin
protein) protein.
Length = 672
Score = 27.5 bits (58), Expect = 6.7
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 205 LSKTFSE-MNPDYFTMANKIYVGNKYTLDEKFTITVRQYQSEVETID 342
L+K+ SE + YF +I V NKY D+K + + + S+ T D
Sbjct: 595 LAKSDSENLANSYFKPVKQINVINKYKSDQKLSTSKSLFPSKTPTFD 641
>AF149285-1|AAF99084.1| 672|Caenorhabditis elegans Osm-3 protein.
Length = 672
Score = 27.5 bits (58), Expect = 6.7
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 205 LSKTFSE-MNPDYFTMANKIYVGNKYTLDEKFTITVRQYQSEVETID 342
L+K+ SE + YF +I V NKY D+K + + + S+ T D
Sbjct: 594 LAKSDSENLANSYFKPVKQINVINKYKSDQKLSTSKSLFPSKTPTFD 640
>Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical
protein F55H12.3 protein.
Length = 2972
Score = 27.1 bits (57), Expect = 8.8
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 7/79 (8%)
Frame = +1
Query: 250 ANKIYVGNKYTL--DEKFTI--TVRQYQSEVETIDFSDTKKAADIINQ---WANEKTRGH 408
+NK V NKY L D T T+R+YQ+ + F D +Q W T G
Sbjct: 732 SNKTPVENKYELTPDNNHTSYGTMRKYQN-LTNFGFGAFCVCGDERSQPDEWICYNTEGL 790
Query: 409 IKSPISDDTIDPNAAAALF 465
+ +PI++ + P A ALF
Sbjct: 791 MTNPINNACMLPEAQDALF 809
>Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 27.1 bits (57), Expect = 8.8
Identities = 23/74 (31%), Positives = 31/74 (41%)
Frame = +1
Query: 115 KAGAGEGSRAEIDKFLGNGDYSGVANPYISLSKTFSEMNPDYFTMANKIYVGNKYTLDEK 294
K G E R++ +K + SGVA S F E N +M + KY DEK
Sbjct: 1948 KRGIAEFERSKQEKEVQR---SGVAETSHSSKHIFDESN---ISMDDVFNTSQKYKSDEK 2001
Query: 295 FTITVRQYQSEVET 336
+ R + EV T
Sbjct: 2002 LSTPERTVEPEVST 2015
>Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 27.1 bits (57), Expect = 8.8
Identities = 23/74 (31%), Positives = 31/74 (41%)
Frame = +1
Query: 115 KAGAGEGSRAEIDKFLGNGDYSGVANPYISLSKTFSEMNPDYFTMANKIYVGNKYTLDEK 294
K G E R++ +K + SGVA S F E N +M + KY DEK
Sbjct: 1948 KRGIAEFERSKQEKEVQR---SGVAETSHSSKHIFDESN---ISMDDVFNTSQKYKSDEK 2001
Query: 295 FTITVRQYQSEVET 336
+ R + EV T
Sbjct: 2002 LSTPERTVEPEVST 2015
>U53149-4|AAA96120.1| 956|Caenorhabditis elegans Patched related
family protein 1 protein.
Length = 956
Score = 27.1 bits (57), Expect = 8.8
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -3
Query: 504 ERHVPVTLEEYNIEERGSCIRIYGVIRDW 418
E H+ + E NIE+ S + Y RDW
Sbjct: 663 EHHLETEVHELNIEKPNSTVEWYTRCRDW 691
>AJ505020-1|CAD43602.1| 382|Caenorhabditis elegans
alpha-1->3-fucosyltransferase homologueprotein.
Length = 382
Score = 27.1 bits (57), Expect = 8.8
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -1
Query: 485 PWKNITLKSAAAAFGSMVSSEIGDLICPRV 396
P KN+T+ A +G + +E+ L CP +
Sbjct: 50 PRKNVTIYVATTYYGDPIDAEMAFLTCPEL 79
>AC006674-5|AAF39933.2| 382|Caenorhabditis elegans Fucosyl
transferase protein 4 protein.
Length = 382
Score = 27.1 bits (57), Expect = 8.8
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -1
Query: 485 PWKNITLKSAAAAFGSMVSSEIGDLICPRV 396
P KN+T+ A +G + +E+ L CP +
Sbjct: 50 PRKNVTIYVATTYYGDPIDAEMAFLTCPEL 79
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.315 0.131 0.375
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,455,209
Number of Sequences: 27780
Number of extensions: 264111
Number of successful extensions: 881
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 839
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 877
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1102518352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)
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