Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_F07
(721 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g40770.1 68415.m05030 SNF2 domain-containing protein / helica... 30 1.3
At4g25940.1 68417.m03731 epsin N-terminal homology (ENTH) domain... 30 1.8
At5g57200.1 68418.m07145 epsin N-terminal homology (ENTH) domain... 29 2.3
At2g45870.1 68415.m05705 expressed protein contains Pfam profile... 29 2.3
At3g61160.2 68416.m06845 shaggy-related protein kinase beta / AS... 28 5.4
At3g61160.1 68416.m06844 shaggy-related protein kinase beta / AS... 28 5.4
At3g52970.1 68416.m05839 cytochrome P450 family protein cytochro... 28 5.4
At2g23200.1 68415.m02771 protein kinase family protein contains ... 28 7.2
At5g15510.1 68418.m01816 expressed protein 27 9.5
At1g64290.1 68414.m07285 F-box protein-related contains TIGRFAM ... 27 9.5
At1g13260.1 68414.m01539 DNA-binding protein RAV1 (RAV1) identic... 27 9.5
>At2g40770.1 68415.m05030 SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger (C3HC4 type RING
finger) family protein low similarity to SP|P36607 DNA
repair protein rad8 {Schizosaccharomyces pombe};
contains Pfam profiles PF00271: Helicase conserved
C-terminal domain, PF00176: SNF2 family N-terminal
domain, PF00628: PHD-finger, PF00097: Zinc finger, C3HC4
type (RING finger)
Length = 1648
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +1
Query: 70 ARKLISTMKRQLTLSETIGKRTPICMKKKLQRIINDLMKLSLAMCSVQ 213
AR++I T+KR + P+ + +++N L+KL A C Q
Sbjct: 719 AREVIETLKRDILKRGHTSSDNPLVTHAEAAKLLNSLLKLRQACCHPQ 766
>At4g25940.1 68417.m03731 epsin N-terminal homology (ENTH)
domain-containing protein contains Pfam PF01417: ENTH
domain. ENTH (Epsin N-terminal homology) domain; similar
to Chain B, Crystal Structure Of N-Terminal Domain Of
Drosophila Ap180 (GP:13399617) [Drosophila
melanogaster]; supporting cDNA
gi|20465326|gb|AY096427.1|
Length = 601
Score = 29.9 bits (64), Expect = 1.8
Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 14/132 (10%)
Frame = +3
Query: 123 WQENADLYEEEVTKDYQ-RSYEIVARHV---LGAAPKPFD---KHTFMPSALDFYQTALR 281
W L+ EE + Y+ Y+I A + GA+ K D T+ L + +
Sbjct: 139 WIRTYALFLEERLECYRVLKYDIEAERLPKGSGASSKNVDFNASQTYRTRMLSDEELLEQ 198
Query: 282 DPAFYQLYXRIVGYI---NAFKHYLKPYPQE---KLHF-VGVKINDVVVEKLVTFFDYSQ 440
PA QL R++G +A+ +YL Y K F + IND ++ + FF+ S+
Sbjct: 199 LPALQQLLYRLIGCQPEGSAYSNYLIQYALALVLKESFKIYCAINDGIINLVDMFFEMSR 258
Query: 441 FDATNSVFLTKK 476
DA ++ + K+
Sbjct: 259 HDAVKALNIYKR 270
>At5g57200.1 68418.m07145 epsin N-terminal homology (ENTH)
domain-containing protein / clathrin assembly
protein-related low similarity to clathrin assembly
protein AP180 [Xenopus laevis] GI:6492344; contains Pfam
profile PF01417: ENTH domain
Length = 591
Score = 29.5 bits (63), Expect = 2.3
Identities = 35/127 (27%), Positives = 56/127 (44%), Gaps = 9/127 (7%)
Frame = +3
Query: 123 WQENADLYEEEVTKDYQ-RSYEIVARHVLGAAPKPFDKH-TFMPSALDFYQTALRDPAFY 296
W L+ EE + Y+ Y+I A + A+ H T M S D + PA
Sbjct: 139 WVRTYALFLEERLECYRVLKYDIEAERLPKASGAASKTHRTRMLSGEDLLEQL---PALQ 195
Query: 297 QLYXRIVGYIN---AFKHYLKPYPQE---KLHF-VGVKINDVVVEKLVTFFDYSQFDATN 455
QL R++G A+ +YL Y K F + IND ++ + FF+ S+ DA
Sbjct: 196 QLLYRLIGCQPEGAAYSNYLIQYALALVLKESFKIYCAINDGIINLVDMFFEMSRHDAVK 255
Query: 456 SVFLTKK 476
++ + K+
Sbjct: 256 ALNIYKR 262
>At2g45870.1 68415.m05705 expressed protein contains Pfam profile
PF05249: Uncharacterised protein family (UPF0187)
Length = 410
Score = 29.5 bits (63), Expect = 2.3
Identities = 24/77 (31%), Positives = 40/77 (51%)
Frame = +1
Query: 49 KANSNRMARKLISTMKRQLTLSETIGKRTPICMKKKLQRIINDLMKLSLAMCSVQHLNHS 228
K++ + ++ KLIS +K S+ I +R + K+ L N + S S++HL H
Sbjct: 49 KSDDSPLSEKLISLLKAVPNWSDGIKERR-MQQKRSLYTHENWVRHRS----SLRHLRHV 103
Query: 229 TSTPSCPVRLTFTKPHF 279
+S+PS V L+ P F
Sbjct: 104 SSSPSSRVILSLIPPVF 120
>At3g61160.2 68416.m06845 shaggy-related protein kinase beta /
ASK-beta (ASK2) identical to shaggy-related protein
kinase beta SP:O23145 GI:2569931 from [Arabidopsis
thaliana]
Length = 438
Score = 28.3 bits (60), Expect = 5.4
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 600 LGPKYNDXGFPITLEENWHKFY 665
+ P+YND FP + WHK +
Sbjct: 337 MNPRYNDFKFPQIKAQPWHKIF 358
>At3g61160.1 68416.m06844 shaggy-related protein kinase beta /
ASK-beta (ASK2) identical to shaggy-related protein
kinase beta SP:O23145 GI:2569931 from [Arabidopsis
thaliana]
Length = 431
Score = 28.3 bits (60), Expect = 5.4
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 600 LGPKYNDXGFPITLEENWHKFY 665
+ P+YND FP + WHK +
Sbjct: 330 MNPRYNDFKFPQIKAQPWHKIF 351
>At3g52970.1 68416.m05839 cytochrome P450 family protein cytochrome
P450 76A2, eggplant, PIR:S38534
Length = 516
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
Frame = +3
Query: 72 KKIDFHDEKAINFVGNYWQENADLYE----EEVTKDY 170
+K FH EKA G + +E ++ E +E TKDY
Sbjct: 242 RKTQFHVEKAFEIAGEFIRERTEVREREKSDEKTKDY 278
>At2g23200.1 68415.m02771 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 834
Score = 27.9 bits (59), Expect = 7.2
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +3
Query: 564 SDIATDAVIKIFLGPKYNDXGFPITLEENWHKFYELDWFTHKITPGQNKIVR 719
S +A I++F P +D P ++N H Y L+ KITP + + R
Sbjct: 177 SSLALINAIEVFSAP--DDLEIPSASDKNLHTIYRLNVGGEKITPDNDTLGR 226
>At5g15510.1 68418.m01816 expressed protein
Length = 497
Score = 27.5 bits (58), Expect = 9.5
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Frame = +3
Query: 75 KIDFHDEKAINFVGNYWQENA---DLYEEEVTKDYQRSYEIVARHVLGAAPKPFDKHTFM 245
+ D+ + ++F+ Y E L EEE + ++ E+V + A P P+ F+
Sbjct: 397 EFDYQVAEKMSFIEQYKMERERQQKLAEEEEIRRLRK--ELVPK----AQPMPYFDRPFI 450
Query: 246 PSALDFYQTALRDPAFY 296
P + TA RDP F+
Sbjct: 451 PRRSSKHPTAPRDPKFH 467
>At1g64290.1 68414.m07285 F-box protein-related contains TIGRFAM
TIGR01640 : F-box protein interaction domain;
Length = 364
Score = 27.5 bits (58), Expect = 9.5
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = -3
Query: 527 ESWLTNLEVVWVTSLNLFFGQEYTVSG--IKLAIVKECD*FLNDNI-IDF 387
ESW NL ++ ++ +F Q Y V G ++ + V E N+ + IDF
Sbjct: 39 ESWFVNLNLLRTNRISGYFIQHYIVKGHELRTSFVHERSDLQNNGVSIDF 88
>At1g13260.1 68414.m01539 DNA-binding protein RAV1 (RAV1) identical
to SP|Q9ZWM9 DNA-binding protein RAV1 {Arabidopsis
thaliana}, RAV1 GI:3868857 from [Arabidopsis thaliana]
Length = 344
Score = 27.5 bits (58), Expect = 9.5
Identities = 21/75 (28%), Positives = 35/75 (46%)
Frame = +3
Query: 249 SALDFYQTALRDPAFYQLYXRIVGYINAFKHYLKPYPQEKLHFVGVKINDVVVEKLVTFF 428
SA ++ A+ +L ++ +A KH+ P P + GV +N V V F
Sbjct: 183 SAEALFEKAVTPSDVGKLNRLVIPKHHAEKHF--PLPSSNVSVKGVLLNFEDVNGKVWRF 240
Query: 429 DYSQFDATNSVFLTK 473
YS ++++ S LTK
Sbjct: 241 RYSYWNSSQSYVLTK 255
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,328,085
Number of Sequences: 28952
Number of extensions: 308420
Number of successful extensions: 932
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 909
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 932
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1565336320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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