Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_F06
(653 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0824 - 32243495-32244319,32244449-32244859 49 4e-06
01_01_1152 + 9170628-9171899 45 5e-05
11_01_0750 - 6315126-6315896,6316371-6316784 39 0.004
11_02_0012 - 7346282-7347136,7347234-7347593 38 0.007
11_02_0011 - 7337618-7338496,7338596-7338991 37 0.016
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 32 0.46
11_02_0014 - 7352619-7352918,7353173-7353418 31 0.61
11_01_0771 + 6453130-6454488 31 0.80
03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869 30 1.4
11_01_0767 + 6438648-6438809,6439146-6440000 30 1.9
05_07_0209 + 28420008-28421510 30 1.9
08_01_0978 + 9841441-9842169,9842303-9842590,9842768-9843612,984... 29 4.3
06_03_0813 - 24853119-24854480,24854711-24855442,24855556-248559... 29 4.3
10_08_0960 - 21853010-21853282,21854078-21854449,21854555-218548... 28 5.6
10_05_0047 + 8524345-8524414,8524687-8524776,8525004-8525306,852... 28 5.6
07_01_0021 - 133549-133628,133780-133824,133850-133858,134513-13... 28 5.6
06_01_1101 - 9044679-9045320,9045484-9045890,9046020-9046274,904... 28 5.6
02_05_0622 + 30437533-30437577,30437694-30438177,30438301-304383... 28 5.6
12_01_1080 + 11241590-11241625,11241723-11242018,11242113-112422... 28 7.5
01_06_1630 + 38753016-38753209,38753904-38754039,38754291-387544... 28 7.5
11_08_0007 + 27551173-27551828,27552071-27552282,27553371-275535... 27 9.9
06_02_0341 + 14778915-14778961,14778982-14779860,14780101-14782804 27 9.9
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 48.8 bits (111), Expect = 4e-06
Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 10/154 (6%)
Frame = +3
Query: 168 GKDKNVVSSPLGVMMLMLLYKSGAGEGSRVEIDKFLGDVD--YSEATNPYISLSKTFSEM 341
G DKN+ SPL + + L +GA + +I FLG A +++L +
Sbjct: 29 GGDKNLAVSPLSLHAALALLGAGARGETLDQIIAFLGPAGGPAHAALASHVALCSLADDS 88
Query: 342 NPDF------FTMANKIYVGNKYTLDEKFTSS-SRQYQSEVETIDFSDT-KKAADIINQW 497
P AN ++V L + + +Y++E + F D ++A IN+W
Sbjct: 89 GPGDDRGGPKVRFANGVWVDAALRLKAAYARVVADKYRAEARPVSFRDKLEEARREINEW 148
Query: 498 ANEKTRGHIKSPISDDTIDPNAAAALFNVIFFQG 599
T G IK + D +D A L N ++F+G
Sbjct: 149 FESATAGRIKDFLPKDAVDRATPAVLGNALYFKG 182
>01_01_1152 + 9170628-9171899
Length = 423
Score = 45.2 bits (102), Expect = 5e-05
Identities = 34/147 (23%), Positives = 68/147 (46%), Gaps = 3/147 (2%)
Frame = +3
Query: 168 GKDKNVVSSPLGVMMLMLLYKSGAGEGSRVEIDKFLGDVDYSEA-TNPYISLSKTFSEMN 344
G+ +N + SPL + L GA ++ E+ FLG +E +P L +
Sbjct: 56 GQGRNFIVSPLSFHAALALVADGARGETQRELLGFLGSPSLAELHRSPTTRLVARLRHLP 115
Query: 345 PDFFTMANKIYVGNKYTLDEKFT-SSSRQYQSEVETIDF-SDTKKAADIINQWANEKTRG 518
F A ++V L +F +++ +Y + E DF + ++A + +N + ++ T G
Sbjct: 116 NTSF--ACGVWVDRGRALTPEFADAAASRYAAVAEPADFATQPEQARERVNAFVSDATEG 173
Query: 519 HIKSPISDDTIDPNAAAALFNVIFFQG 599
I+ + +++D + L N + F+G
Sbjct: 174 LIRDVLPPNSVDSSTVVVLANAVHFKG 200
>11_01_0750 - 6315126-6315896,6316371-6316784
Length = 394
Score = 38.7 bits (86), Expect = 0.004
Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = +3
Query: 363 ANKIYVGNKYTLDEKFTS-SSRQYQSEVETIDFSDTKK-AADIINQWANEKTRGHIKSPI 536
A ++ +L +F + Y S + DF + + A D IN W + T+G + + +
Sbjct: 103 AGGVWADASRSLSPEFVGLAGNVYGSAAKKADFKNKPEDAPDQINSWVKDSTKGTVTTLL 162
Query: 537 SDDTIDPNAAAALFNVIFFQG 599
TID N L + ++F+G
Sbjct: 163 PAGTIDQNTGLVLGSALYFRG 183
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 37.9 bits (84), Expect = 0.007
Identities = 40/169 (23%), Positives = 71/169 (42%), Gaps = 6/169 (3%)
Frame = +3
Query: 135 SMKLLKEAYTSG--KDKNVVSSPLGVMMLMLLYKSGAGEGSRVEIDKFLGDV---DYSEA 299
+++L K G ++NVV SP+ + + L SGA + E+ LG D E+
Sbjct: 15 ALRLAKRLADDGDNSNRNVVFSPVSLYAALALVASGARGTTLDELVALLGAASLDDLEES 74
Query: 300 TNPYISLSKTF-SEMNPDFFTMANKIYVGNKYTLDEKFTSSSRQYQSEVETIDFSDTKKA 476
+ + SE + A ++ + L + ++ Q Q + S KK
Sbjct: 75 VRRAVEVGLADESESGGPRVSYACGVWHDERLALKPAYRAADFQRQPK------SSRKK- 127
Query: 477 ADIINQWANEKTRGHIKSPISDDTIDPNAAAALFNVIFFQGHLARAFQR 623
IN+W ++ T I+ + D ++ A L N I+F+G + F R
Sbjct: 128 ---INKWVSKATNKLIREILPDGSVHGGTALVLVNAIYFKGKWSNPFPR 173
>11_02_0011 - 7337618-7338496,7338596-7338991
Length = 424
Score = 36.7 bits (81), Expect = 0.016
Identities = 36/159 (22%), Positives = 71/159 (44%), Gaps = 9/159 (5%)
Frame = +3
Query: 174 DKNVVSSPLGVMMLMLLYKSGAGEGSRVEIDKFLG-----DVDYSEATNPYISLSKTFSE 338
+KN+V SP + + L +GA + E+ LG D++ S + L+ +
Sbjct: 30 NKNLVFSPASLYAALALVAAGARGTTLDELLALLGAASLDDLEESVRRAVEVGLADESAS 89
Query: 339 MNPDFFTMANKIYVGNKYTLDEK---FTSSSRQYQSEVETIDFS-DTKKAADIINQWANE 506
P +++ V + TL+ K +++ Y++ +F K++ IN+W ++
Sbjct: 90 GGP---RVSDACGVWHDETLELKPAYRAAAAGTYKAVTRAANFQRQPKRSRKKINKWVSK 146
Query: 507 KTRGHIKSPISDDTIDPNAAAALFNVIFFQGHLARAFQR 623
T I + D ++ + A L N I+F+G + F R
Sbjct: 147 ATNKLIPEILPDGSVHVDTALVLVNAIYFKGKWSNPFPR 185
>03_05_0293 +
22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 31.9 bits (69), Expect = 0.46
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +3
Query: 486 INQWANEKTRGHIKSPISDDTIDPNAAAALFNVIFFQGHLARAF 617
+N W + T G IK+ + +I+ N L N ++F+G A F
Sbjct: 469 VNSWVDRVTSGLIKNIATPRSINHNTKLVLANALYFKGAWAEKF 512
Score = 31.1 bits (67), Expect = 0.80
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Frame = +3
Query: 444 ETIDFSDTKKAADI---INQWANEKTRGHIKSPISDDTIDPNAAAALFNVIFFQGHLARA 614
E I + KAA++ +N W + T G IK + ++D L N ++F+G
Sbjct: 200 EPITHWTSGKAAEVASQVNSWVEKVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAWTEK 259
Query: 615 F 617
F
Sbjct: 260 F 260
Score = 29.9 bits (64), Expect = 1.9
Identities = 24/104 (23%), Positives = 48/104 (46%), Gaps = 7/104 (6%)
Frame = +3
Query: 168 GKDKNVVSSPLGVMMLMLLYKSGAGEGSRVEIDKFLGDVDYSEATNPY------ISLSKT 329
G +NV SPL + + + L +GAG +R ++ LG +E + + + L+
Sbjct: 32 GAGRNVAFSPLSLHVALSLVAAGAGGATRDQLASALGGPGSAEGLHAFAEQLVQLVLADA 91
Query: 330 FSEMNPDFFTMANKIYVGNKYTLDEKFTS-SSRQYQSEVETIDF 458
P A+ ++V +L + F + +Y++E ++DF
Sbjct: 92 SGAGGPR-VAFADGVFVDASLSLKKTFGDVAVGKYKAETHSVDF 134
>11_02_0014 - 7352619-7352918,7353173-7353418
Length = 181
Score = 31.5 bits (68), Expect = 0.61
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +3
Query: 462 DTKKAADIINQWANEKTRGHIKSPISDDTIDPNAAAALFNVIFFQGHLARAFQR 623
+ KK+ IN+W ++ T I + D ++ L N I+F+G + F R
Sbjct: 82 EPKKSRKKINEWVSKATNKLIPEILPDGSVHRLTTLVLVNAIYFKGKWSDPFPR 135
>11_01_0771 + 6453130-6454488
Length = 452
Score = 31.1 bits (67), Expect = 0.80
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +3
Query: 468 KKAADIINQWANEKTRGHIKSPISDDTIDPNAAAALFNVIFFQGHLARAF 617
++A IN WA T I + ++ P A L N I+F+G R F
Sbjct: 171 EEARKQINAWARRATGKLITDVLPPRSVGPETAVVLGNAIYFKGKWDRPF 220
>03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869
Length = 258
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/49 (26%), Positives = 22/49 (44%)
Frame = +3
Query: 471 KAADIINQWANEKTRGHIKSPISDDTIDPNAAAALFNVIFFQGHLARAF 617
+ A +N W + T G IK + ++D L N ++F+G F
Sbjct: 4 EVASQVNSWVDRVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAWTEKF 52
>11_01_0767 + 6438648-6438809,6439146-6440000
Length = 338
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/73 (26%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Frame = +3
Query: 429 YQSEVETIDFSDTK-KAADIINQWANEKTRGHIKSPISDDTIDPNAAAALFNVIFFQGHL 605
Y+ T+DF + +A IN W T+ I I ++ + + N I+F+G
Sbjct: 42 YKGAASTVDFKNHPVEARKEINAWVARATKNLITEVIKPESQSVDTRHVVGNAIYFKGEW 101
Query: 606 ARAFQRX*DYKER 644
F + D ER
Sbjct: 102 LAPFDKS-DTAER 113
>05_07_0209 + 28420008-28421510
Length = 500
Score = 29.9 bits (64), Expect = 1.9
Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Frame = +3
Query: 249 SRVEIDKFLGDVDYSEATN---PYISLSKTFSEMNPDFFTMANKIYVGNKYTLDEKFTSS 419
S +++ + L D D + A + P + + MNP FT+ + NK +L E+FT+S
Sbjct: 279 SVLQLHRLLVDQDAAAAASFPAPIDGVLDWVASMNPRVFTVVEQEADHNKSSLLERFTNS 338
Query: 420 SRQYQSEVETID 455
Y S ++++
Sbjct: 339 LFYYASMFDSLE 350
>08_01_0978 +
9841441-9842169,9842303-9842590,9842768-9843612,
9843941-9844223,9844303-9844416
Length = 752
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +3
Query: 408 FTSSSRQYQSEVETIDFSDTKKA-ADIINQWANEKTRGHIKSPISDDTID-PNAA 566
+ ++ E E + S+T++ ADI QWA R +K SD+T+ PN A
Sbjct: 182 YAGKQAEWDKEDEAVAESNTQQVLADIPVQWARNWARARVKKN-SDETLSFPNPA 235
>06_03_0813 -
24853119-24854480,24854711-24855442,24855556-24855962,
24856091-24856359,24856681-24856733,24857019-24857078,
24857309-24857363,24858080-24858155,24858225-24858801
Length = 1196
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = -1
Query: 563 CIWIYGVIRDWRFNMSSGLLISPLINDVSCFFGIAEVNSFNL 438
CIW YG I+ + F++ + + I+ L+ +S GI V L
Sbjct: 434 CIWHYGTIKKYEFDLQNKVSINWLLG-LSPNLGIVRVRGIGL 474
>10_08_0960 -
21853010-21853282,21854078-21854449,21854555-21854862,
21854946-21855102
Length = 369
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +3
Query: 498 ANEKTRGHIKSPISDDTIDPNAAAA 572
A + RG KSP DD I+PNAAAA
Sbjct: 241 AAAQARGS-KSPEDDDNINPNAAAA 264
>10_05_0047 +
8524345-8524414,8524687-8524776,8525004-8525306,
8525413-8525872,8525962-8526043,8526157-8526351
Length = 399
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +3
Query: 282 VDYSEATNPYISLSKTFSEMNPDFFTMANKIYVGNKYTLDEKFTSSSRQYQSEVETI 452
++ E N K E N D T NK+ ++ T +EK S+ R+ + + E I
Sbjct: 331 MELKEGDNSERKREKALEEYN-DEITRINKVAAASRLTAEEKRRSAERKVREKAERI 386
>07_01_0021 -
133549-133628,133780-133824,133850-133858,134513-134656,
140098-140391,141324-141908,142034-142198,142364-142406
Length = 454
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/50 (28%), Positives = 32/50 (64%)
Frame = -1
Query: 632 VSXALKGTCQVTLEEYNIEERGSCIWIYGVIRDWRFNMSSGLLISPLIND 483
VS + +CQ+TL++++++E G C+ + + D F+ ++G+ + +ND
Sbjct: 344 VSMNVYSSCQITLKDFSLQESG-CL-LPSMPSDASFDPATGISFTCDLND 391
>06_01_1101 -
9044679-9045320,9045484-9045890,9046020-9046274,
9046375-9046498,9047237-9047289,9047388-9047648,
9047795-9047848,9047975-9048458,9048554-9048592
Length = 772
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -1
Query: 563 CIWIYGVIRDWRFNMSSGLLISPLINDVSCFFGIAEVNSFNL 438
C+W YG + + F++ + + IS L+N + GI V L
Sbjct: 494 CVWHYGTKKKYEFDVQNKVSISWLLN-IGPSLGIVRVRGIGL 534
>02_05_0622 +
30437533-30437577,30437694-30438177,30438301-30438354,
30438565-30438789,30438891-30438943,30439591-30439714,
30439823-30440077,30440171-30440517,30440661-30441266,
30441504-30441546,30441624-30441757
Length = 789
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = -1
Query: 563 CIWIYGVIRDWRFNMSSGLLISPLINDVSCFFGIAEVNSFNL 438
C+W YG I+ + F+ + + ++ L+N + GI V L
Sbjct: 484 CVWHYGTIKKYEFDFQNKVSVNWLLN-LGPSLGIVRVRGIGL 524
>12_01_1080 +
11241590-11241625,11241723-11242018,11242113-11242269,
11242381-11242449,11242551-11243480,11243868-11243906,
11244414-11244478,11244663-11244768,11244850-11245050,
11247001-11247201,11247756-11247779,11249425-11249586,
11249676-11249915,11250267-11250479,11250618-11250968,
11251041-11251193,11251649-11251858,11252049-11252267,
11252365-11252482,11252879-11253828,11254023-11254220,
11254294-11254553,11255316-11255505,11255817-11256169,
11258278-11258386,11258466-11258615,11258748-11258844,
11259315-11259415
Length = 2065
Score = 27.9 bits (59), Expect = 7.5
Identities = 21/88 (23%), Positives = 37/88 (42%), Gaps = 1/88 (1%)
Frame = +3
Query: 357 TMANKIYVGNKYTLDEKFTSSSRQYQSEVETIDFSDTKKAADIINQWANEKTRGHIKSPI 536
TM N V + DE+FT+ + YQ+E + + K + + + + + +
Sbjct: 688 TMPNVAAVADWLQKDEEFTAQAALYQTEFRPVPLEEFIKVGNQV--FDKDMNVVRVLPKV 745
Query: 537 SD-DTIDPNAAAALFNVIFFQGHLARAF 617
+D DP+ L N + QGH F
Sbjct: 746 ADLGGKDPDHIVELCNEVVQQGHSVLLF 773
>01_06_1630 +
38753016-38753209,38753904-38754039,38754291-38754404,
38755053-38755112,38755223-38755252,38755523-38756206
Length = 405
Score = 27.9 bits (59), Expect = 7.5
Identities = 24/101 (23%), Positives = 45/101 (44%), Gaps = 5/101 (4%)
Frame = +1
Query: 361 WPIKSTSEINILWMRNSRALPVSTKARLKLLTSAIPKKQLTSLISG---LMRRPEDILNL 531
W + S +N+ + R S +PV+ L + + +LT I G L+ R E
Sbjct: 266 WQLPDLSSLNLSYNRFSGEIPVNISEMTYLYSIGLQHNKLTGSIPGKFALLSRLESFNVS 325
Query: 532 QSLMTP*IQMQLPR--SSMLYSSRVTWHVPFNAXETIKKDF 648
+L++ I + L + +S ++ VPF++ T D+
Sbjct: 326 DNLLSGPIPVALSKFSTSCFSGNQGLCGVPFDSCSTSYGDY 366
>11_08_0007 +
27551173-27551828,27552071-27552282,27553371-27553550,
27555154-27556187
Length = 693
Score = 27.5 bits (58), Expect = 9.9
Identities = 27/101 (26%), Positives = 39/101 (38%), Gaps = 4/101 (3%)
Frame = +3
Query: 186 VSSPLGVMMLMLLYKSGAGEGSRVEIDKFLGDVDYSEATNPYIS---LSKTFSEMNPDFF 356
V +G + S G S V D G++ P +S SK S D +
Sbjct: 509 VDIAVGCAEALACMHSNIGHKSVVHGDVKSGNILLGNNLEPKVSDFGSSKLMSVAKSDNW 568
Query: 357 T-MANKIYVGNKYTLDEKFTSSSRQYQSEVETIDFSDTKKA 476
+ MA+K Y+ Y +FT S Y V ++ KKA
Sbjct: 569 SVMADKSYIDPAYIKTGRFTEKSDVYSFGVVLLELITRKKA 609
>06_02_0341 + 14778915-14778961,14778982-14779860,14780101-14782804
Length = 1209
Score = 27.5 bits (58), Expect = 9.9
Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 8/90 (8%)
Frame = +3
Query: 297 ATNPYISLSKTFSEMNPDFFTMANKIYVGNKYTLDEKFTSSSRQYQSEVETIDFSD---- 464
A N + L + ++ FT +K+ G+ T ++ S + S T+ ++
Sbjct: 685 ANNGALLLRQFVQTLSGPAFTWYSKLAPGSIRTWEQMQDSFLEHFYSTQRTVGITELTQT 744
Query: 465 ----TKKAADIINQWANEKTRGHIKSPISD 542
+KAAD IN+W N H PI++
Sbjct: 745 EQRANEKAADFINRWRNLSL--HCPQPITE 772
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,259,423
Number of Sequences: 37544
Number of extensions: 351634
Number of successful extensions: 941
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 916
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 939
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -