Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_F06
(653 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_38975| Best HMM Match : Serpin (HMM E-Value=0) 57 1e-08
SB_55237| Best HMM Match : Serpin (HMM E-Value=0) 48 9e-06
SB_55238| Best HMM Match : Serpin (HMM E-Value=0) 45 5e-05
SB_18241| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.029
SB_2329| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.35
SB_34605| Best HMM Match : APG6 (HMM E-Value=0.94) 31 0.82
SB_42208| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_48285| Best HMM Match : Torsin (HMM E-Value=0) 29 2.5
SB_19363| Best HMM Match : Neuromodulin (HMM E-Value=1.4) 29 2.5
SB_27357| Best HMM Match : MFMR (HMM E-Value=3.2) 29 3.3
SB_1509| Best HMM Match : SRR (HMM E-Value=0.22) 29 3.3
SB_50937| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_24828| Best HMM Match : Peptidase_A17 (HMM E-Value=1.7e-23) 29 4.4
>SB_38975| Best HMM Match : Serpin (HMM E-Value=0)
Length = 380
Score = 57.2 bits (132), Expect = 1e-08
Identities = 35/152 (23%), Positives = 79/152 (51%), Gaps = 4/152 (2%)
Frame = +3
Query: 180 NVVSSPLGVMMLMLLYKSGAGEGSRVEIDK-FLGDVDYSEATNPYI-SLSKTFSEMNPDF 353
N+ SP +++ + + GA + ++ K F D E + ++ +L+ + S+ N
Sbjct: 29 NLFYSPASIVVALAMTYLGARGNTATQMTKTFHFPTDVPEKFHDFLQALNASNSDGNQ-- 86
Query: 354 FTMANKIYVGNKYTLDEKFTSSSRQ-YQSEVETIDF-SDTKKAADIINQWANEKTRGHIK 527
MAN+++ + + E+F +S++ + +E+ +D+ ++ A D +N+W +KT+ IK
Sbjct: 87 ILMANRLFAQMGFEILEEFKKASKESFSAEMALVDYVKNSNGARDTVNRWVEQKTKDKIK 146
Query: 528 SPISDDTIDPNAAAALFNVIFFQGHLARAFQR 623
+ I + + + L N ++F+G + F R
Sbjct: 147 NLIPEGMFNKDTILCLVNAVYFKGSWMKHFNR 178
>SB_55237| Best HMM Match : Serpin (HMM E-Value=0)
Length = 363
Score = 47.6 bits (108), Expect = 9e-06
Identities = 33/143 (23%), Positives = 68/143 (47%), Gaps = 6/143 (4%)
Frame = +3
Query: 207 MMLMLLYKSGAGEGSRVEIDKFLG--DVDYSEATNPYISLSKTF--SEMNPDFFTMANKI 374
M L L+Y G + ++I G + ++ E + + S++ + NKI
Sbjct: 3 MALGLVYLGSRGT-TAIQIANIFGWKESEFEETHRTFKQFHEALLTSDLGYGEIQLVNKI 61
Query: 375 YVGNKYTLDEKFTSSSRQ-YQSEVETIDFSDTK-KAADIINQWANEKTRGHIKSPISDDT 548
+ +++ + E+F +R+ Y SE+ +DF + A +N W +++T+G+IK I
Sbjct: 62 WGHDEFEILEEFLHGTREFYHSEMAQVDFVNKAFDARKEVNAWVHQQTKGNIKELIPHGV 121
Query: 549 IDPNAAAALFNVIFFQGHLARAF 617
I+ + N ++F+G + F
Sbjct: 122 INSLTRLIIVNAVYFKGVWKKEF 144
>SB_55238| Best HMM Match : Serpin (HMM E-Value=0)
Length = 345
Score = 45.2 bits (102), Expect = 5e-05
Identities = 22/99 (22%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Frame = +3
Query: 357 TMANKIYVGNKYTLDEKFTS-SSRQYQSEVETIDF-SDTKKAADIINQWANEKTRGHIKS 530
++AN +++ +++ ++FT + Y +++ +D+ +D + A +NQW E+T+ I
Sbjct: 51 SIANNLFLQKDFSILKEFTDICQKYYDADISLVDYKTDFEGARKHVNQWVEERTKKKICD 110
Query: 531 PISDDTIDPNAAAALFNVIFFQGHLARAFQRX*DYKERF 647
I+ + L N I+F+G + F++ + F
Sbjct: 111 LIAPGVFNMLTRLTLVNAIYFKGMWDKPFKKEHSHSSEF 149
>SB_18241| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 65
Score = 35.9 bits (79), Expect = 0.029
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = -1
Query: 569 GSCIWIYGVIRDWRF-NMSSGLLISPLINDVS 477
GSC+W GV R W+F +++ G L+S L N V+
Sbjct: 3 GSCLWKLGVFRAWKFGSVNDGFLLSGLSNQVA 34
>SB_2329| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1181
Score = 32.3 bits (70), Expect = 0.35
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = +3
Query: 282 VDYSEATNPYISLSKTFSEMNPDFFTMANKIYVGNKYTLDEKFTSSSRQYQSEVETIDFS 461
+ S AT P+I + T NP+FF ++ + + T DE + + + ++ I
Sbjct: 276 IKQSNATTPFIVIQNTLEVKNPNFFEVSLSA-LNQQVTWDEHYVVADVSFGNQSVVIPRR 334
Query: 462 DTKKAADI--INQWAN 503
+KK + +NQ+ N
Sbjct: 335 SSKKMEGLHDMNQYLN 350
>SB_34605| Best HMM Match : APG6 (HMM E-Value=0.94)
Length = 1047
Score = 31.1 bits (67), Expect = 0.82
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +3
Query: 342 NPDFFTMANKIYVGNKYTLDEKFTSSSRQYQSEV-ETIDFSDTKKAADIINQWANEKTRG 518
+PD + +K T D + + +SEV E DFS K D + + +EK R
Sbjct: 102 DPDVMERILTERIHDKLTSDSELEPLLNELKSEVAEDYDFSVRKAIVDYVLKDPSEKNRL 161
Query: 519 HIKS 530
HIKS
Sbjct: 162 HIKS 165
>SB_42208| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +1
Query: 358 LWP-IKSTSEINILWMRNSRALPVSTKARLKLLTSAIPKKQLTSLISGLM 504
LWP IK + + W N +LP+ +L S K L L+S +M
Sbjct: 17 LWPAIKDVTHAMVTWTTNGTSLPLRMTNTYDILLSLCQKVGLVRLVSAVM 66
>SB_48285| Best HMM Match : Torsin (HMM E-Value=0)
Length = 636
Score = 29.5 bits (63), Expect = 2.5
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Frame = +3
Query: 384 NKYTLDEKFTSSSRQYQSE------VETIDFSDTKKAADIINQWANEKTRGHIKSPISDD 545
N TL K +SSR Q ++ ID + ++AA+I + A E R HI +PI +
Sbjct: 90 NNTTLSSKTPASSRSMQIGRPKSFGLKDIDLTKNRRAAEI--KAARENNRNHIFTPIRQN 147
Query: 546 TIDPNAAAALFNV 584
+ + FN+
Sbjct: 148 SCPSMTSGQHFNL 160
>SB_19363| Best HMM Match : Neuromodulin (HMM E-Value=1.4)
Length = 361
Score = 29.5 bits (63), Expect = 2.5
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +3
Query: 258 EIDKFLGDVDYSEATNPYISLSKTFS 335
++D F GD+ +EA+NP+I+ K S
Sbjct: 216 DMDSFTGDIPETEASNPFIAPQKVVS 241
>SB_27357| Best HMM Match : MFMR (HMM E-Value=3.2)
Length = 468
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/51 (27%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Frame = +3
Query: 285 DYSEATNPYISLSKTFSEMNPDFFTMA-NKIYVGNKY-TLDEKFTSSSRQY 431
+YS + Y++LSK +S ++ ++ T++ N + Y TL + + + S+ Y
Sbjct: 19 NYSTLSRNYLTLSKNYSTLSKNYLTLSKNYSTLSKNYLTLSKNYLTLSKNY 69
>SB_1509| Best HMM Match : SRR (HMM E-Value=0.22)
Length = 644
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/51 (27%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Frame = +3
Query: 285 DYSEATNPYISLSKTFSEMNPDFFTMA-NKIYVGNKY-TLDEKFTSSSRQY 431
+YS + Y++LSK +S ++ ++ T++ N + Y TL + + + S+ Y
Sbjct: 19 NYSTLSRNYLTLSKNYSTLSKNYLTLSKNYSTLSKNYLTLSKNYLTLSKNY 69
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/49 (26%), Positives = 28/49 (57%)
Frame = +3
Query: 285 DYSEATNPYISLSKTFSEMNPDFFTMANKIYVGNKYTLDEKFTSSSRQY 431
+YS + Y++LSK +S ++ ++ T++ N TL + + + S+ Y
Sbjct: 112 NYSTLSKNYLTLSKNYSTLSKNYLTLSK-----NYSTLSKNYLTLSKNY 155
>SB_50937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2480
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = -1
Query: 521 MSSGLLISPLINDVSCFFGIAEVNSFNLALVL 426
+ G++ S LIND C+F VN +NLA+++
Sbjct: 1803 LGQGIVESVLINDFGCYF---TVNRYNLAMMV 1831
>SB_24828| Best HMM Match : Peptidase_A17 (HMM E-Value=1.7e-23)
Length = 1531
Score = 28.7 bits (61), Expect = 4.4
Identities = 16/59 (27%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +1
Query: 355 LLWPIKSTSEINILWMRNSRALPV--STKARLKLLTSAIPKKQLTSLISGLMRRPEDIL 525
L+WP + E +I+ + +R P+ ST RLK++ + + + + + L +PE+I+
Sbjct: 1302 LVWPTPQSPEFSIVAAK-ARVAPLRQSTIPRLKMMAALVAFRLAKTTVPELKTKPENIV 1359
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,694,244
Number of Sequences: 59808
Number of extensions: 399349
Number of successful extensions: 1012
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 953
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1008
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1669334250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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