Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_E24
(652 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70755-3|CAA94782.1| 475|Caenorhabditis elegans Hypothetical pr... 171 5e-43
U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I ho... 108 4e-24
L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophi... 108 4e-24
U88311-8|AAB42341.2| 918|Caenorhabditis elegans Hypothetical pr... 41 9e-04
U80848-1|AAB37990.3| 389|Caenorhabditis elegans Hypothetical pr... 30 1.6
U29488-9|AAA68778.1| 342|Caenorhabditis elegans Hypothetical pr... 29 2.2
U23176-6|AAC46718.1| 1374|Caenorhabditis elegans Hypothetical pr... 28 6.6
AF016655-9|AAK31440.1| 348|Caenorhabditis elegans Hypothetical ... 28 6.6
>Z70755-3|CAA94782.1| 475|Caenorhabditis elegans Hypothetical
protein K06A4.3 protein.
Length = 475
Score = 171 bits (415), Expect = 5e-43
Identities = 84/207 (40%), Positives = 118/207 (57%), Gaps = 1/207 (0%)
Frame = +2
Query: 23 PAFANAGRQAGVEIWRIQNFEPVAVQSKDFGKFYKGDSYIILKTTSDKRNNLSWDIHYWI 202
PA A G++ G+ +WRI F V D G FY GD+YI L D WD+H+W+
Sbjct: 8 PALAEIGKKNGLLVWRINKFVLEPVPEVDHGVFYIGDAYIALYQKYDG----CWDVHFWL 63
Query: 203 GSETSQDEAGAAAILTVGLDDKFGGAAVQHREAMGHESNHFLQYFTSALQYLDGGNPSGF 382
G S DE G AAI TV +DD GG QHRE +ES FL YF ++Y+ GG SG+
Sbjct: 64 GKNASTDEIGVAAIKTVEIDDSLGGIPTQHREIQNYESPLFLSYFPDGIRYVSGGYESGY 123
Query: 383 NHVVTN-PGAEKRMFQVKGKRNVRVRQVDPLISSMNKGDCFILDINNDIYVYVGERTKNV 559
HV + +F KGKRNVR +V+ ++S+N GD FILD+ D+YV++ + +
Sbjct: 124 RHVDDQFKNWKPHLFHCKGKRNVRCTEVECEVNSLNLGDVFILDLGKDLYVWMPPESGRL 183
Query: 560 EKLKAISMANQIRDQDHNGRGRVEIID 640
E++K ++ A I D + G +V I+D
Sbjct: 184 ERIKGMARAKNIADHERMGIPKVHILD 210
Score = 33.1 bits (72), Expect = 0.18
Identities = 39/153 (25%), Positives = 58/153 (37%), Gaps = 2/153 (1%)
Frame = +2
Query: 188 IHYWIGSETSQDEAGAAAILTVG-LDDKFGGAAVQHREAM-GHESNHFLQYFTSALQYLD 361
I WIG E + +E A I L Q + ES F Q+F ++D
Sbjct: 294 IFVWIGHECTLEERSKALIWGQNYLKQHHLPRWTQVTRVLESAESTQFTQWFRD---WVD 350
Query: 362 GGNPSGFNHVVTNPGAEKRMFQVKGKRNVRVRQVDPLISSMNKGDCFILDINNDIYVYVG 541
+ F ++ E + V+ N +D D ILD N IYV+VG
Sbjct: 351 EKKKNTFTPLLFQVSDESGLLHVEEIANFTQEDLDG-------DDVMILDALNSIYVWVG 403
Query: 542 ERTKNVEKLKAISMANQIRDQDHNGRGRVEIID 640
EK +A++ A ++D R + ID
Sbjct: 404 ANANANEKKEALNTAKLYLEKDKLPRHKKTAID 436
>U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I homolog
protein.
Length = 1257
Score = 108 bits (259), Expect = 4e-24
Identities = 59/202 (29%), Positives = 98/202 (48%), Gaps = 3/202 (1%)
Frame = +2
Query: 35 NAGRQAGVEIWRIQNFEPVAVQSKDFGKFYKGDSYIILKTTSDKRNNLSWDIHYWIGSET 214
+ G G+ +W I+NF P + G+FY D+Y++LKTT + L I YW+G
Sbjct: 503 DVGSDEGMWVWEIENFYPSIMDEAFHGQFYDADAYLVLKTTREASGQLRHAIFYWLGEHA 562
Query: 215 SQDEAGAAAILTVGLDDKFGGAAVQHREAMGHESNHFLQYFTSALQYLDGGNP-SGFNHV 391
S D+ +A+ VGL + RE M E+ FL F + Y++GG SGF +
Sbjct: 563 SLDKGMCSAVHAVGLRNHLNATCRTQREEMNDETEEFLTLFGEEIVYIEGGRTISGF-YT 621
Query: 392 VTNPGAEKRMFQ--VKGKRNVRVRQVDPLISSMNKGDCFILDINNDIYVYVGERTKNVEK 565
P R+++ V G V + V + S++ CF+LD I+++ G +++
Sbjct: 622 TEKPAHLTRLYRAGVNGTA-VEMEPVPLSVESLDPRFCFLLDAGETIWIWSGYKSRITVS 680
Query: 566 LKAISMANQIRDQDHNGRGRVE 631
KA A ++ +D G+ +E
Sbjct: 681 NKARLFAERLNKRDRKGKSEIE 702
>L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophila
flightless) homologprotein 1 protein.
Length = 1257
Score = 108 bits (259), Expect = 4e-24
Identities = 59/202 (29%), Positives = 98/202 (48%), Gaps = 3/202 (1%)
Frame = +2
Query: 35 NAGRQAGVEIWRIQNFEPVAVQSKDFGKFYKGDSYIILKTTSDKRNNLSWDIHYWIGSET 214
+ G G+ +W I+NF P + G+FY D+Y++LKTT + L I YW+G
Sbjct: 503 DVGSDEGMWVWEIENFYPSIMDEAFHGQFYDADAYLVLKTTREASGQLRHAIFYWLGEHA 562
Query: 215 SQDEAGAAAILTVGLDDKFGGAAVQHREAMGHESNHFLQYFTSALQYLDGGNP-SGFNHV 391
S D+ +A+ VGL + RE M E+ FL F + Y++GG SGF +
Sbjct: 563 SLDKGMCSAVHAVGLRNHLNATCRTQREEMNDETEEFLTLFGEEIVYIEGGRTISGF-YT 621
Query: 392 VTNPGAEKRMFQ--VKGKRNVRVRQVDPLISSMNKGDCFILDINNDIYVYVGERTKNVEK 565
P R+++ V G V + V + S++ CF+LD I+++ G +++
Sbjct: 622 TEKPAHLTRLYRAGVNGTA-VEMEPVPLSVESLDPRFCFLLDAGETIWIWSGYKSRITVS 680
Query: 566 LKAISMANQIRDQDHNGRGRVE 631
KA A ++ +D G+ +E
Sbjct: 681 NKARLFAERLNKRDRKGKSEIE 702
>U88311-8|AAB42341.2| 918|Caenorhabditis elegans Hypothetical
protein C10H11.1 protein.
Length = 918
Score = 40.7 bits (91), Expect = 9e-04
Identities = 21/66 (31%), Positives = 37/66 (56%)
Frame = +2
Query: 398 NPGAEKRMFQVKGKRNVRVRQVDPLISSMNKGDCFILDINNDIYVYVGERTKNVEKLKAI 577
+P + + QV+G +NV VR V P +SS+++ CF++ + Y G + +EK KA
Sbjct: 214 SPYPDVMLIQVRGSKNVDVRLVAPAMSSVHEVACFVVVHQKHLMKYEGLYSNILEKTKAS 273
Query: 578 SMANQI 595
+ +I
Sbjct: 274 QLCIEI 279
>U80848-1|AAB37990.3| 389|Caenorhabditis elegans Hypothetical
protein T10H10.3 protein.
Length = 389
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +2
Query: 65 WRIQNFEPVAVQSKDFGKFYKGDSYIILKTTSDKRNNLSWDIH 193
W + NFE + K YK + + I+K KRN L+ +IH
Sbjct: 332 WDLFNFEQLTEYEHLMMKLYKQEVFDIVKKYEKKRNVLNREIH 374
>U29488-9|AAA68778.1| 342|Caenorhabditis elegans Hypothetical
protein C56C10.10 protein.
Length = 342
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -1
Query: 481 GRYQWVYLSHSNIPLAFNLEHTFLGTRIRHDVVET 377
G +WV L NIPL N+ +L H+ ET
Sbjct: 231 GEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEET 265
>U23176-6|AAC46718.1| 1374|Caenorhabditis elegans Hypothetical protein
F21H12.6 protein.
Length = 1374
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +2
Query: 188 IHYWIGSETSQDEAGAAAILTVGLDDKFGGAAVQHREAM 304
+H +G++ S D A +A+ T+G + KF G A+ + M
Sbjct: 966 VHVKLGNKISVDLAASASDATLGKECKFAGKALLPNQEM 1004
>AF016655-9|AAK31440.1| 348|Caenorhabditis elegans Hypothetical
protein C17F4.5 protein.
Length = 348
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = -3
Query: 146 ELYRNLLCRTSQSLSIGLRLVQNSESAKFRHQL 48
+L LL + LSIGL L+ NSE KF L
Sbjct: 95 DLISRLLSGYQEPLSIGLLLIPNSEVLKFPESL 127
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,618,041
Number of Sequences: 27780
Number of extensions: 347421
Number of successful extensions: 916
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 912
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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