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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_E23
         (483 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0613 + 4904869-4905126,4905389-4906138,4907708-4907767           29   1.5  
11_05_0091 - 18982390-18982948,18983088-18983173                       29   2.0  
02_04_0463 + 23135732-23136888,23138956-23139333,23139506-23139530     29   2.6  
02_02_0099 + 6768115-6768285,6769950-6770034,6770501-6770628,677...    29   2.6  
04_01_0162 + 1845295-1846317,1846430-1846565,1848436-1848626,184...    28   3.4  
10_08_0554 - 18728485-18728676,18728778-18728859,18729083-187291...    28   4.5  
10_01_0126 + 1511963-1512052,1513440-1513785,1513884-1515010           28   4.5  
09_06_0280 + 22010270-22011407,22011890-22013097                       28   4.5  
11_06_0013 - 19252779-19252805,19252947-19253090,19253572-192536...    27   6.0  
04_01_0344 + 4517730-4517918,4518212-4518359,4518454-4518569,451...    27   6.0  
12_01_0222 - 1675077-1675289,1675476-1675553,1675943-1676002,167...    27   7.9  
09_04_0032 - 13953323-13955269                                         27   7.9  

>11_01_0613 + 4904869-4905126,4905389-4906138,4907708-4907767
          Length = 355

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +2

Query: 230 LNPRTKPAPPRSRSW 274
           LNPR  PAPP +R+W
Sbjct: 77  LNPRATPAPPSARTW 91


>11_05_0091 - 18982390-18982948,18983088-18983173
          Length = 214

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +2

Query: 227 NLNPRTKPAPPRSRSWSCC*PGKPRGNSCISSTTP 331
           +L P   P+P    +  CC  G+   NS ++S TP
Sbjct: 130 SLQPSPSPSPTPDSATPCCLTGRLADNSTLNSDTP 164


>02_04_0463 + 23135732-23136888,23138956-23139333,23139506-23139530
          Length = 519

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 20/52 (38%), Positives = 27/52 (51%)
 Frame = +1

Query: 85  RRITRQALAEAKAIKEQINILVYVAEMVATDPVLAWTKAKELYSSLSQPEPE 240
           RRI R    E K +KEQIN+L    ++  T+  ++    K L   LSQ E E
Sbjct: 382 RRIDRPETNEEKDLKEQINLL--RVDLKETEANISDEDKKGLSEKLSQMERE 431


>02_02_0099 +
           6768115-6768285,6769950-6770034,6770501-6770628,
           6771429-6771465,6773108-6774193,6774337-6774447,
           6774701-6774817,6774818-6775120,6776092-6776513,
           6776645-6777274
          Length = 1029

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 18/42 (42%), Positives = 21/42 (50%)
 Frame = -1

Query: 402 VGCKRHVLGNKRQALAYVSRQVRVGVVDEMHEFPRGFPGQQH 277
           VG   HVLG   Q  A     +R+ V+DE  E  RGF  Q H
Sbjct: 782 VGTPCHVLG-MLQGRALCPDHIRMFVLDEADEVLRGFKDQIH 822


>04_01_0162 +
           1845295-1846317,1846430-1846565,1848436-1848626,
           1848780-1848887,1849001-1849204,1849294-1849525,
           1849602-1849751,1849830-1850007,1850416-1850519,
           1850611-1850933,1851274-1851459,1851672-1851899
          Length = 1020

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +1

Query: 16  GETGRAKAAQAVQHGARLKRKLQRRITRQALAEA 117
           G+     + QAV HG +LK +L R +TR+   E+
Sbjct: 640 GQVYHYPSFQAVTHGDKLKHELSRDLTRETAWES 673


>10_08_0554 -
           18728485-18728676,18728778-18728859,18729083-18729170,
           18729286-18729327,18729747-18729858
          Length = 171

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +1

Query: 388 SFAADSLLKTVPVETAMVEIKGWKENSK 471
           S   D+LL TV  E  +  IK W+EN K
Sbjct: 48  SHERDALLTTVATEKRISLIKAWEENEK 75


>10_01_0126 + 1511963-1512052,1513440-1513785,1513884-1515010
          Length = 520

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = -1

Query: 441 DHSSFHGYRLEKRVGCKRHVLGNKRQALAYVSRQ-VRVGVVDEMHEFP 301
           DH S HG++  K  GC+  ++G + + +  V+ + +    + E HE P
Sbjct: 67  DHHSKHGHKKRKHSGCE--IVGEETRKVCNVTMEHLEKSSLSEEHEAP 112


>09_06_0280 + 22010270-22011407,22011890-22013097
          Length = 781

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +2

Query: 263 SRSWSCC*PGKPRGNSCISSTTPTRTCLETY 355
           + +WSC  PG+ R ++CIS+ +      + Y
Sbjct: 279 ANNWSCPTPGEARRSACISNNSYCHNVTDNY 309


>11_06_0013 -
           19252779-19252805,19252947-19253090,19253572-19253663,
           19253757-19253835,19253965-19254031,19254163-19254254,
           19254986-19255102,19255254-19255365,19255479-19255594,
           19255680-19255756,19255912-19255993,19256077-19256214,
           19258806-19259009
          Length = 448

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = +2

Query: 233 NPRTKPAPPRSRSWSCC*PGKPRGNSCISSTTPTRTCL 346
           +PR  P PP + SW C  P  P G   +SS     TCL
Sbjct: 288 SPRNGPLPPNAPSW-CEAPFDPEG--LLSSLMAIVTCL 322


>04_01_0344 +
           4517730-4517918,4518212-4518359,4518454-4518569,
           4518917-4518979,4519084-4519152,4519317-4519352
          Length = 206

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 17/53 (32%), Positives = 23/53 (43%)
 Frame = +2

Query: 188 LGQKPRSYTRL*ANLNPRTKPAPPRSRSWSCC*PGKPRGNSCISSTTPTRTCL 346
           +G K   Y+ +    +  TKP    +R WS C     RGN   S+   TR  L
Sbjct: 105 MGDKDMDYSSI--EYHKPTKPRVRHTRPWSSCIKSSNRGNFHPSTKLRTRVNL 155


>12_01_0222 -
           1675077-1675289,1675476-1675553,1675943-1676002,
           1676103-1676206,1676321-1676479,1676768-1676894,
           1677569-1677736,1677890-1678000,1678090-1678243,
           1678409-1678744,1678854-1679038,1679141-1679239,
           1679376-1679639,1679776-1679952,1680351-1680644,
           1680753-1680920,1681574-1681918,1682002-1682171,
           1682272-1682422,1683296-1683365,1683456-1683640,
           1683999-1684092,1684195-1684313,1684658-1684717,
           1684844-1684930,1685631-1685717,1685905-1686013,
           1686105-1686183,1686350-1686437,1686611-1686675,
           1687570-1687722,1688514-1688620,1688702-1688784,
           1688926-1689016,1689095-1689231,1689612-1689701,
           1689795-1689962,1690366-1690560
          Length = 1809

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
 Frame = +1

Query: 13  EGETGRAKAAQAVQHGARLKRKLQRRITRQALAE-AKAIKEQINILVYVAEMVATDPVLA 189
           E  +  A AA A Q  A  +  L R +TR ALAE A+       +L Y    +A+     
Sbjct: 3   ETSSPAAAAAAAAQTDAEREEALDRMLTRLALAEDARLAPLLARVLPYAITSLASPAASV 62

Query: 190 WTKAKELYSSLSQ 228
                E+ S +++
Sbjct: 63  RKLVMEILSHINK 75


>09_04_0032 - 13953323-13955269
          Length = 648

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -3

Query: 319 RDARISSRFPWSATRPTPRAWRG 251
           RDA +  R PW+++  +P  WRG
Sbjct: 40  RDA-VGPRLPWASSSSSPCGWRG 61


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.315    0.128    0.354 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,537,103
Number of Sequences: 37544
Number of extensions: 287777
Number of successful extensions: 991
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 975
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 991
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 987904180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)

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