Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_E23
(483 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_10199| Best HMM Match : DUF1625 (HMM E-Value=2.1e-08) 33 0.093
SB_16808| Best HMM Match : DUF1454 (HMM E-Value=1.7) 29 1.5
SB_32051| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.0
SB_29994| Best HMM Match : Ank (HMM E-Value=0) 28 3.5
SB_19346| Best HMM Match : ATP-synt_E_2 (HMM E-Value=2.4) 28 3.5
SB_5534| Best HMM Match : Peptidase_C48 (HMM E-Value=0.00016) 28 3.5
SB_47849| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.5
SB_25298| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.5
SB_26444| Best HMM Match : CAP_GLY (HMM E-Value=1.2e-23) 28 4.6
SB_43502| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.1
SB_10966| Best HMM Match : Peptidase_C48 (HMM E-Value=1.6) 27 6.1
SB_57474| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.1
>SB_10199| Best HMM Match : DUF1625 (HMM E-Value=2.1e-08)
Length = 401
Score = 33.5 bits (73), Expect = 0.093
Identities = 21/65 (32%), Positives = 30/65 (46%)
Frame = +1
Query: 145 LVYVAEMVATDPVLAWTKAKELYSSLSQPEPENQARPAXXXXXXXXXXRETARKFVHLVN 324
LV + ++A PVL W + + + +SLS E R R+ K VHLV
Sbjct: 163 LVGIGLVLAAFPVLYWNEGRAVQTSLSLDE---GLRAVIPLHSINEINRKNQDKLVHLVG 219
Query: 325 YTHTD 339
+ HTD
Sbjct: 220 HLHTD 224
>SB_16808| Best HMM Match : DUF1454 (HMM E-Value=1.7)
Length = 364
Score = 29.5 bits (63), Expect = 1.5
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Frame = +1
Query: 298 ARKFVHLVNYTH-----TDLPRNVRQGLTL-VTKHMSFAADSLLKTVPVETAMVEIKGWK 459
A +F+ +NYT D+P++ G+T + FAA+ TVPV+ + I WK
Sbjct: 122 AGEFLVTINYTSGSWYSVDIPKSAFTGMTWDAVFQLKFAANGAGSTVPVDIYLDNIYFWK 181
>SB_32051| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1090
Score = 29.1 bits (62), Expect = 2.0
Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +1
Query: 376 TKHMS-FAADSLLKTVPVETAMVEIKGWKE 462
TK +S F DS LK V E+ VE+ GW+E
Sbjct: 819 TKWLSNFVIDSYLKIVKSESTNVEVFGWEE 848
>SB_29994| Best HMM Match : Ank (HMM E-Value=0)
Length = 407
Score = 28.3 bits (60), Expect = 3.5
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 348 KRTPRLDACYQAHVFCSRLSSQDGTRGN 431
KRTP +AC Q +V C+ L G + N
Sbjct: 260 KRTPLHEACQQGNVLCTTLLLDAGAKPN 287
>SB_19346| Best HMM Match : ATP-synt_E_2 (HMM E-Value=2.4)
Length = 528
Score = 28.3 bits (60), Expect = 3.5
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 388 SFAADSLLKTVPVETAMVEIKGWKE 462
+F DS LK V E+ VE+ GW+E
Sbjct: 409 NFVIDSYLKIVKSESTNVEVFGWEE 433
>SB_5534| Best HMM Match : Peptidase_C48 (HMM E-Value=0.00016)
Length = 313
Score = 28.3 bits (60), Expect = 3.5
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 388 SFAADSLLKTVPVETAMVEIKGWKE 462
+F DS LK V E+ VE+ GW+E
Sbjct: 126 NFVIDSYLKIVKSESTNVEVFGWEE 150
>SB_47849| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1922
Score = 28.3 bits (60), Expect = 3.5
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 388 SFAADSLLKTVPVETAMVEIKGWKE 462
+F DS LK V E+ VE+ GW+E
Sbjct: 1674 NFVIDSYLKIVKSESTNVEVFGWEE 1698
>SB_25298| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 824
Score = 28.3 bits (60), Expect = 3.5
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +2
Query: 167 WQRTQC*LGQKPRSYTRL*ANLNPRTKPAPPRSRSWSC 280
W+ + G R +TR LN R+ P P R+RS +C
Sbjct: 686 WKSNESASGYPSRYHTRSYFLLNNRSTPRPTRARSVTC 723
>SB_26444| Best HMM Match : CAP_GLY (HMM E-Value=1.2e-23)
Length = 1024
Score = 27.9 bits (59), Expect = 4.6
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Frame = +1
Query: 7 GVEGETGRAKAAQAVQHGARLKRKLQR--RITRQALAEAKAIKEQINILVYVAEMVATDP 180
GVEG A+ Q Q RLK + R I + +++++Q+ L + D
Sbjct: 371 GVEGAAANAQVKQLEQQNTRLKEAIVRFKEIQMSDKQQLQSLQKQVKDLHSANTSLQADK 430
Query: 181 VLAWTKAKELYSSLSQ 228
+A++L S+L++
Sbjct: 431 DQLMEEAEQLESTLAE 446
>SB_43502| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 189
Score = 27.5 bits (58), Expect = 6.1
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = -2
Query: 404 ESAAKDMCLVTSVKPWRTFLGKSVWV*LTRCTN 306
+ ++ C T KPW + L K W TRC +
Sbjct: 106 QDVKEETCENTPTKPWLSLLLKFSWEIFTRCVH 138
>SB_10966| Best HMM Match : Peptidase_C48 (HMM E-Value=1.6)
Length = 495
Score = 27.5 bits (58), Expect = 6.1
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 388 SFAADSLLKTVPVETAMVEIKGWKE 462
+F DS LK V E+ VE+ GW+E
Sbjct: 284 NFVIDSHLKIVKSESTNVEVFGWEE 308
>SB_57474| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 53
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +3
Query: 381 AHVFCSRLSSQDGTRGNCYGRDQRLEGKLQISI 479
A VFC R + D C+G D + GK+ S+
Sbjct: 22 ADVFCDRFNRLDSLNIACWG-DNAINGKMDFSV 53
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.315 0.128 0.354
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,712,675
Number of Sequences: 59808
Number of extensions: 302307
Number of successful extensions: 831
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 829
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1013948003
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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