Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_E22
(593 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0997 + 7884974-7885043,7885689-7885975,7886056-7886311,788... 46 2e-05
11_06_0689 - 26294961-26294976,26295271-26295414,26295506-262959... 41 9e-04
05_06_0116 - 25719030-25719458,25720138-25720301,25720390-257206... 40 0.001
03_02_0712 - 10600147-10600196,10600257-10600378,10600993-106014... 37 0.014
01_05_0108 + 18183250-18183336,18183451-18183962,18184074-181842... 35 0.043
02_04_0414 - 22685981-22686178,22686374-22686465,22686580-226866... 31 0.52
02_05_0540 + 29852109-29852195,29852304-29852477,29852585-298528... 31 0.69
02_04_0532 + 23711530-23711755,23712984-23713093,23713204-237152... 30 1.6
07_03_0603 - 19890664-19890823,19891104-19891329,19891498-198916... 29 3.7
09_02_0371 + 8064616-8065683,8066194-8068318,8068425-8068468 28 4.9
01_03_0175 + 13450869-13451013,13451293-13451372,13451417-134522... 28 6.5
03_05_1065 + 30061588-30061883,30061995-30062056,30062196-300622... 27 8.5
>01_01_0997 +
7884974-7885043,7885689-7885975,7886056-7886311,
7886455-7886537,7886634-7886687,7887941-7888012,
7889093-7889155,7889274-7889324,7889432-7889513,
7889606-7889701,7889774-7889944,7890024-7890130,
7890229-7890326,7890798-7891048,7891235-7891398,
7891689-7891979,7892067-7892377,7892477-7892655,
7893231-7893301
Length = 918
Score = 46.0 bits (104), Expect = 2e-05
Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 12/116 (10%)
Frame = +3
Query: 177 KINSKYSEELA---QESLEWIRVITGEPENISG--DMDNFYEVLKDGTLLCKLVNTIQPN 341
++ S+ +EE A ++ W+ + G P +S F +++G +LCK +N IQP
Sbjct: 14 RLASRKAEEAALRRHQAATWLESVIG-PFGLSRCPSEQEFVAAVRNGIVLCKAINKIQPG 72
Query: 342 MVKKV--NVS-----KMAFKCMENINAFLEAARQLGVPAQETFQTVDLWERQNLNS 488
V KV N S AF+ ENI FL A ++L +P F+ DL E+ N+++
Sbjct: 73 AVPKVVANASCDSQPSTAFQYFENIRNFLVAVQELKLPC---FEASDL-EKDNIDA 124
>11_06_0689 -
26294961-26294976,26295271-26295414,26295506-26295909,
26296112-26296261,26296334-26296497,26296526-26296836,
26296948-26297084,26297276-26297416,26297821-26297867,
26297977-26298072,26298168-26298249,26298332-26298472,
26298607-26298702,26298809-26298877,26298959-26299030,
26299201-26299368,26299577-26299711,26299792-26299958,
26301213-26301369
Length = 898
Score = 40.7 bits (91), Expect = 9e-04
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 13/113 (11%)
Frame = +3
Query: 213 ESLEWIR----VITGEPENISGDMDNFYEVLKDGTLLCKLVNTIQPNMVKKV-------- 356
E+ W+R V+ G+ + F L++G +LC +N +QP V KV
Sbjct: 58 EAANWLRRVVGVVCGKDLAEEPSEEEFRLGLRNGIVLCNALNKVQPGSVPKVVEAPSDSA 117
Query: 357 -NVSKMAFKCMENINAFLEAARQLGVPAQETFQTVDLWERQNLNSVVICLQSL 512
+ A++ EN+ FL + LG+P TF+ DL + VV C+ SL
Sbjct: 118 DGAALCAYQYFENVRNFLMGLQDLGLP---TFEASDLEKGGKGVRVVDCVLSL 167
>05_06_0116 -
25719030-25719458,25720138-25720301,25720390-25720643,
25720727-25720782,25721032-25721169,25721315-25721421,
25721502-25721681,25721757-25721852,25721926-25722007,
25722084-25722425,25722666-25722695,25722788-25722880,
25722963-25723040,25723122-25723222,25723833-25724058,
25724647-25724760,25724855-25725009,25725515-25725554
Length = 894
Score = 39.9 bits (89), Expect = 0.001
Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 2/99 (2%)
Frame = +3
Query: 213 ESLEWIRVITGEP-ENISGDMDNFYEVLKDGTLLCKLVNTIQPNMVKKV-NVSKMAFKCM 386
E +EW+ + E + D E+L DGT+LC +VN + P ++++ + +
Sbjct: 19 EVIEWLNALLPEYCLPLDSSDDELRELLSDGTVLCHIVNALIPGVLEESWGAYASSDQHA 78
Query: 387 ENINAFLEAARQLGVPAQETFQTVDLWERQNLNSVVICL 503
++ FL +G+P F DL E +++ VV CL
Sbjct: 79 GHVKKFLAVVADMGLPG---FSVKDL-EEGSMSGVVDCL 113
>03_02_0712 -
10600147-10600196,10600257-10600378,10600993-10601489,
10601663-10601851,10601936-10602099,10602193-10602446,
10602535-10602691,10602830-10602995,10603121-10603227,
10603305-10603478,10603594-10603689,10603781-10603862,
10603948-10604058,10604253-10604309,10604638-10604709,
10604799-10605041,10605195-10605341,10605381-10605616,
10605745-10605865
Length = 1014
Score = 36.7 bits (81), Expect = 0.014
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Frame = +3
Query: 318 LVNTIQPNMVKKVNVSKMAFKCMENINAFLEAARQLGVPAQETFQTVDLWERQNLNSVVI 497
+VNT ++++ + AF+ EN+ FL AA+++G+P E + + + V+
Sbjct: 121 VVNTAADSVLQPDGAALSAFQYFENVRNFLVAAQEIGLPCFEASDLEQGGKSARVVNCVL 180
Query: 498 CLQSLG--RKAGGFG 536
L+S G ++ GG G
Sbjct: 181 ALKSYGDWKQCGGTG 195
>01_05_0108 +
18183250-18183336,18183451-18183962,18184074-18184245,
18184984-18185022,18185117-18185185,18185281-18185397,
18185842-18186056,18187085-18187240,18187328-18187527,
18187927-18188084,18188321-18188417,18188738-18188829,
18189018-18189191
Length = 695
Score = 35.1 bits (77), Expect = 0.043
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Frame = +3
Query: 273 DNFYEVLKDGTLLCKLVNTIQPNMV--KKVNVSKM--AFKCMENINAFLEAARQLG 428
D+ + + KDG LLCKL+N P + + +N K+ ++ EN L +A+ +G
Sbjct: 187 DHLFHLTKDGVLLCKLINLAVPGTIDERAINTKKLLNLWEKNENHTLCLNSAKAIG 242
>02_04_0414 -
22685981-22686178,22686374-22686465,22686580-22686676,
22686801-22686916,22687314-22687513,22687588-22687740,
22687960-22688171,22688403-22688519,22688613-22688687,
22688815-22688853,22689518-22689689,22689809-22690056,
22690151-22690324,22690418-22690504
Length = 659
Score = 31.5 bits (68), Expect = 0.52
Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Frame = +3
Query: 273 DNFYEVLKDGTLLCKLVNTIQPNMV--KKVNVSK--MAFKCMENINAFLEAARQLG 428
++ + +++DG LLCKL+N P + + +N K ++ EN L +A+ +G
Sbjct: 157 NDIFNLVRDGVLLCKLINVAVPGTIDERAINTKKDPNPWERNENHTLCLNSAKAIG 212
>02_05_0540 +
29852109-29852195,29852304-29852477,29852585-29852841,
29852954-29853125,29853513-29853551,29853647-29853715,
29853795-29853911,29854190-29854401,29854578-29854736,
29854810-29855009,29855100-29855266,29855346-29855442,
29855560-29855651,29855861-29856139
Length = 706
Score = 31.1 bits (67), Expect = 0.69
Identities = 15/56 (26%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Frame = +3
Query: 273 DNFYEVLKDGTLLCKLVNTIQPNMVKKVNVSKM----AFKCMENINAFLEAARQLG 428
+ +++++DG LLCKL+N P + + ++K ++ EN L +A+ +G
Sbjct: 160 NQLFDLVRDGVLLCKLINLAVPGTIDERAINKKRVLNPWERNENHTLCLNSAKAIG 215
>02_04_0532 +
23711530-23711755,23712984-23713093,23713204-23715298,
23716092-23716153,23716236-23716277,23716614-23716673,
23716873-23717010,23717333-23717374,23717452-23717574
Length = 965
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 157 LPQKRRERSTVNTAKNLPRSRWNGSELSP 243
L R E+S + K+L + WNG ELSP
Sbjct: 892 LDSMRMEKSYYDKDKDLNNTHWNGKELSP 920
>07_03_0603 -
19890664-19890823,19891104-19891329,19891498-19891636,
19891849-19891942,19892291-19892311,19892506-19892941,
19893133-19893280,19893369-19893476,19893543-19893659,
19893960-19894016,19894488-19894553,19895140-19895328,
19895410-19895523,19895684-19895766,19895857-19896322,
19896832-19897476
Length = 1022
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/59 (23%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Frame = +3
Query: 276 NFYEVLKDGTLLCKLVNTIQPN---MVKKVNVSKMAFKCMENINAFLEAARQLGVPAQE 443
N +E L+DG +LC+++ + + ++K + S K + N ++ +Q G P +
Sbjct: 410 NLFEDLQDGIILCRIIQLLTSDASIILKVIAPSDTYKKRLHNCTMAIQYIKQAGFPLSD 468
>09_02_0371 + 8064616-8065683,8066194-8068318,8068425-8068468
Length = 1078
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -1
Query: 431 HAELPRCLEECVNVFHAFERHLGYVHFLHHVRLNGVHQLAQ 309
H + R LE A +++G + FL H+ L G H LA+
Sbjct: 599 HLKHLRYLELGYTNISALPQNIGKMKFLEHIGLRGCHSLAE 639
>01_03_0175 +
13450869-13451013,13451293-13451372,13451417-13452240,
13452287-13452638
Length = 466
Score = 27.9 bits (59), Expect = 6.5
Identities = 28/101 (27%), Positives = 39/101 (38%)
Frame = -2
Query: 325 FTSLHNNVPSLSTS*KLSISPEMFSGSPVITRIHSNDSWASSSLYLLLIFLCASAANPDL 146
F+SLH + S + ++SP S S R W+SS+ LL L AS P L
Sbjct: 177 FSSLHRHGAVAVLSSRTAVSPLSSSSSSPAHRHPRRPHWSSSAAQGLLPLLRASP--PHL 234
Query: 145 VARLLAILXXXXXXXXXXXXKSQNTVGT**SSHCVQNVNRR 23
+A L + VG SS N++ R
Sbjct: 235 QVATVATLGRWSSYLYIASNVAVQAVGPATSSSSSSNMSHR 275
>03_05_1065 + 30061588-30061883,30061995-30062056,30062196-30062276,
30062391-30062464,30062547-30062629,30063044-30063147,
30063526-30063665,30063736-30063783,30063939-30063991,
30064178-30064262,30064346-30064412,30064496-30064606,
30065262-30065283,30066244-30071110,30071186-30071374,
30071463-30071577,30072329-30073388,30074247-30074694,
30074966-30075019,30075105-30076898,30076989-30077949,
30078271-30078384,30078459-30078613,30078934-30079026,
30079341-30079613,30093423-30093975,30094465-30094540,
30094619-30094718
Length = 4025
Score = 27.5 bits (58), Expect = 8.5
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 172 RERSTVNTAKNLPRSRWNGSELSPANPKTFP 264
+ER + N NLP + G E ++PK++P
Sbjct: 3929 KERKSENENTNLPFKQIRGQECDNSDPKSYP 3959
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,927,141
Number of Sequences: 37544
Number of extensions: 355656
Number of successful extensions: 986
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 964
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 985
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1411925004
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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