Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_E22
(593 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79755-6|CAB02104.1| 192|Caenorhabditis elegans Hypothetical pr... 156 1e-38
AF169201-2|AAF01679.1| 192|Caenorhabditis elegans CPN-1 protein. 156 1e-38
U97013-5|AAB52338.1| 142|Caenorhabditis elegans Calponin protei... 126 1e-29
AF039711-7|AAB96713.3| 154|Caenorhabditis elegans Calponin prot... 113 9e-26
AF040641-1|AAB94947.2| 203|Caenorhabditis elegans Calponin prot... 85 3e-17
U23520-5|AAC46554.4| 975|Caenorhabditis elegans Mammalian vav (... 45 5e-05
U23520-4|ABB88236.1| 1007|Caenorhabditis elegans Mammalian vav (... 45 5e-05
DQ136172-1|AAZ66767.1| 1007|Caenorhabditis elegans VAV-1 protein. 45 5e-05
U39645-2|AAA80365.2| 638|Caenorhabditis elegans Hypothetical pr... 38 0.004
AY157938-1|AAN35200.1| 1751|Caenorhabditis elegans ANC-1 protein. 33 0.20
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 33 0.20
U64854-2|AAK77611.1| 2257|Caenorhabditis elegans Uncoordinated p... 32 0.35
U64854-1|AAK77612.2| 2302|Caenorhabditis elegans Uncoordinated p... 32 0.35
AF261891-1|AAF72996.1| 2257|Caenorhabditis elegans beta-spectrin... 32 0.35
AF166170-1|AAD49859.1| 2257|Caenorhabditis elegans beta-G spectr... 32 0.35
AF166169-1|AAD49858.1| 2302|Caenorhabditis elegans beta-G spectr... 32 0.35
AL032657-13|CAB76744.1| 87|Caenorhabditis elegans Hypothetical... 29 2.5
Z75552-2|CAA99944.1| 894|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z75552-1|CAA99941.1| 920|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z82268-12|CAL64003.1| 1210|Caenorhabditis elegans Hypothetical p... 28 5.8
Z82268-10|CAB05202.1| 972|Caenorhabditis elegans Hypothetical p... 28 5.8
AL021476-3|CAL63996.1| 1210|Caenorhabditis elegans Hypothetical ... 28 5.8
AL021476-1|CAA16317.1| 972|Caenorhabditis elegans Hypothetical ... 28 5.8
AC006633-5|AAO21429.1| 506|Caenorhabditis elegans Prion-like-(q... 28 5.8
AC006633-4|AAK68376.3| 1128|Caenorhabditis elegans Prion-like-(q... 28 5.8
Z81552-4|CAB04488.2| 765|Caenorhabditis elegans Hypothetical pr... 27 7.6
>Z79755-6|CAB02104.1| 192|Caenorhabditis elegans Hypothetical
protein F43G9.9 protein.
Length = 192
Score = 156 bits (378), Expect = 1e-38
Identities = 78/156 (50%), Positives = 110/156 (70%), Gaps = 1/156 (0%)
Frame = +3
Query: 129 ANNRATKSGFAAEAQRKINSKYSEELAQESLEWIRVITGEPENISGDMDNFYEVLKDGTL 308
+++RA KSG A EAQ+KI KY + LA E L+W++ +TG+ + GD DN +V +DG+L
Sbjct: 6 SSDRAEKSGIALEAQQKIYEKYDKNLAGEILQWVQNVTGQSFDTQGDADNLVKVFQDGSL 65
Query: 309 LCKLVNTIQPNMVKKVNVSKMAFKCMENINAFLEAARQLGVPAQETFQTVDLWERQNLNS 488
LC L N+++P VKKVN S MAFK MENI+ FL+ A + V E FQTVDL+E Q+ N+
Sbjct: 66 LCTLANSLKPGSVKKVNTSAMAFKKMENISFFLKFAEEY-VQKSELFQTVDLYEGQDPNA 124
Query: 489 VVICLQSLGRKA-GGFGKPSIGPKEAEKNVRNFSEE 593
V+ICL SL RK+ FG+ +GPKEA+ + R +++E
Sbjct: 125 VLICLASLARKSEKNFGRSGLGPKEAQGDRREWTDE 160
>AF169201-2|AAF01679.1| 192|Caenorhabditis elegans CPN-1 protein.
Length = 192
Score = 156 bits (378), Expect = 1e-38
Identities = 78/156 (50%), Positives = 110/156 (70%), Gaps = 1/156 (0%)
Frame = +3
Query: 129 ANNRATKSGFAAEAQRKINSKYSEELAQESLEWIRVITGEPENISGDMDNFYEVLKDGTL 308
+++RA KSG A EAQ+KI KY + LA E L+W++ +TG+ + GD DN +V +DG+L
Sbjct: 6 SSDRAEKSGIALEAQQKIYEKYDKNLAGEILQWVQNVTGQSFDTQGDADNLVKVFQDGSL 65
Query: 309 LCKLVNTIQPNMVKKVNVSKMAFKCMENINAFLEAARQLGVPAQETFQTVDLWERQNLNS 488
LC L N+++P VKKVN S MAFK MENI+ FL+ A + V E FQTVDL+E Q+ N+
Sbjct: 66 LCTLANSLKPGSVKKVNTSAMAFKKMENISFFLKFAEEY-VQKSELFQTVDLYEGQDPNA 124
Query: 489 VVICLQSLGRKA-GGFGKPSIGPKEAEKNVRNFSEE 593
V+ICL SL RK+ FG+ +GPKEA+ + R +++E
Sbjct: 125 VLICLASLARKSEKNFGRSGLGPKEAQGDRREWTDE 160
>U97013-5|AAB52338.1| 142|Caenorhabditis elegans Calponin protein 3
protein.
Length = 142
Score = 126 bits (304), Expect = 1e-29
Identities = 64/135 (47%), Positives = 88/135 (65%)
Frame = +3
Query: 135 NRATKSGFAAEAQRKINSKYSEELAQESLEWIRVITGEPENISGDMDNFYEVLKDGTLLC 314
NR T G ++K +SK+ ++ A LEWI+ ++GE + SG+ DNF+ +LKDGTLLC
Sbjct: 3 NRTTAGGIGFAVRQKQDSKFIDKEATLLLEWIKKLSGENISTSGERDNFHNLLKDGTLLC 62
Query: 315 KLVNTIQPNMVKKVNVSKMAFKCMENINAFLEAARQLGVPAQETFQTVDLWERQNLNSVV 494
K N I+ +KKV F CMENINAF+E A++ GVP +ETFQ+V+L E ++L SV
Sbjct: 63 KAANGIEAGSIKKVQKPISTFACMENINAFVEFAKKQGVPNEETFQSVELVEGRDLFSVC 122
Query: 495 ICLQSLGRKAGGFGK 539
+ L SLGR GK
Sbjct: 123 VTLLSLGRVLQKAGK 137
>AF039711-7|AAB96713.3| 154|Caenorhabditis elegans Calponin protein
4 protein.
Length = 154
Score = 113 bits (272), Expect = 9e-26
Identities = 65/146 (44%), Positives = 84/146 (57%)
Frame = +3
Query: 135 NRATKSGFAAEAQRKINSKYSEELAQESLEWIRVITGEPENISGDMDNFYEVLKDGTLLC 314
+R +G A K SK+++ A LEWIR +T E + DNF E LKDG LC
Sbjct: 6 HRPRPAGMAGAILDKQASKFNDVEAGYLLEWIRDLTKEDFDCEASRDNFREQLKDGQRLC 65
Query: 315 KLVNTIQPNMVKKVNVSKMAFKCMENINAFLEAARQLGVPAQETFQTVDLWERQNLNSVV 494
KLVN I+ VKK+ F C+ENIN F AAR LGV +ETFQ+VDL++ ++L SV
Sbjct: 66 KLVNAIKAGSVKKIMKPISNFNCLENINQFSTAARSLGVKDEETFQSVDLFDGRDLFSVT 125
Query: 495 ICLQSLGRKAGGFGKPSIGPKEAEKN 572
+ LQSL RK G PK+ K+
Sbjct: 126 VTLQSLARKVEKLG--ITPPKQVSKD 149
>AF040641-1|AAB94947.2| 203|Caenorhabditis elegans Calponin protein
2 protein.
Length = 203
Score = 85.4 bits (202), Expect = 3e-17
Identities = 56/161 (34%), Positives = 82/161 (50%), Gaps = 9/161 (5%)
Frame = +3
Query: 135 NRATKSGFAAEAQRKINSKYSEELAQESLEWIRVITGEPENIS----GDMDNFYEVLKDG 302
N G + E Q+K ++++ E A E L+WI +TGE + + +LKDG
Sbjct: 3 NHGPSYGLSRELQKKNDARFVLEEAIEVLKWIENVTGERFSFDVTTCESSTDVSNLLKDG 62
Query: 303 TLLCKLVNTIQPNMVKKVNVS-KMAFKCMENINAFLEAARQLGVPAQETFQTVDLWERQN 479
+LCKL+ + P+ N KMAF MENI+ FL AA+Q GV FQTVDL+E +
Sbjct: 63 VMLCKLIEKLDPSCRVVYNKKPKMAFPMMENISNFLAAAKQFGVMEISCFQTVDLYENKQ 122
Query: 480 LNSVVICLQSLG----RKAGGFGKPSIGPKEAEKNVRNFSE 590
V+ CL+ L ++ P+ K A+ + R F E
Sbjct: 123 CYKVIECLRLLAAVAQSRSSHLEHPAWVVKLAQSSPRQFPE 163
>U23520-5|AAC46554.4| 975|Caenorhabditis elegans Mammalian vav
(oncogene) relatedprotein 1, isoform a protein.
Length = 975
Score = 44.8 bits (101), Expect = 5e-05
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 5/101 (4%)
Frame = +3
Query: 225 WIRVITGEPENISGDMDNFYEVLKDGTLLCKLVNTIQPNMVKKVNVSK----MAFKCMEN 392
W+R + + +G M F VL+DG LLC+L NT+ PN + + + + F C N
Sbjct: 14 WLRDMKVLTTDKNGTMLEFASVLRDGILLCRLANTLVPNGIDQKKIMRTNQPSPFLCCNN 73
Query: 393 INAF-LEAARQLGVPAQETFQTVDLWERQNLNSVVICLQSL 512
IN F + + + F DL+ V+ L L
Sbjct: 74 INYFAMFCKTYFNLEDADLFTAEDLYYMNGFQKVLKTLSFL 114
>U23520-4|ABB88236.1| 1007|Caenorhabditis elegans Mammalian vav
(oncogene) relatedprotein 1, isoform b protein.
Length = 1007
Score = 44.8 bits (101), Expect = 5e-05
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 5/101 (4%)
Frame = +3
Query: 225 WIRVITGEPENISGDMDNFYEVLKDGTLLCKLVNTIQPNMVKKVNVSK----MAFKCMEN 392
W+R + + +G M F VL+DG LLC+L NT+ PN + + + + F C N
Sbjct: 46 WLRDMKVLTTDKNGTMLEFASVLRDGILLCRLANTLVPNGIDQKKIMRTNQPSPFLCCNN 105
Query: 393 INAF-LEAARQLGVPAQETFQTVDLWERQNLNSVVICLQSL 512
IN F + + + F DL+ V+ L L
Sbjct: 106 INYFAMFCKTYFNLEDADLFTAEDLYYMNGFQKVLKTLSFL 146
>DQ136172-1|AAZ66767.1| 1007|Caenorhabditis elegans VAV-1 protein.
Length = 1007
Score = 44.8 bits (101), Expect = 5e-05
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 5/101 (4%)
Frame = +3
Query: 225 WIRVITGEPENISGDMDNFYEVLKDGTLLCKLVNTIQPNMVKKVNVSK----MAFKCMEN 392
W+R + + +G M F VL+DG LLC+L NT+ PN + + + + F C N
Sbjct: 46 WLRDMKVLTTDKNGTMLEFASVLRDGILLCRLANTLVPNGIDQKKIMRTNQPSPFLCCNN 105
Query: 393 INAF-LEAARQLGVPAQETFQTVDLWERQNLNSVVICLQSL 512
IN F + + + F DL+ V+ L L
Sbjct: 106 INYFAMFCKTYFNLEDADLFTAEDLYYMNGFQKVLKTLSFL 146
>U39645-2|AAA80365.2| 638|Caenorhabditis elegans Hypothetical
protein C14F11.2 protein.
Length = 638
Score = 38.3 bits (85), Expect = 0.004
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Frame = +3
Query: 264 GDMDNFYEVLKDGTLLCKLVNTIQP---NMVKKVNVSKMAFKCMENINAFLEAARQLGVP 434
GD+ +F L DG LCK +N + P ++ + S + N++ FL+ R++GVP
Sbjct: 540 GDI-SFSLQLSDGQELCKFINKLHPESISLASSTDSSIATTRSKMNVDRFLQYCRKIGVP 598
Query: 435 AQETFQTVDLWERQNLNSV 491
+D+ ++N V
Sbjct: 599 ETTLCSQMDIISKRNPQKV 617
>AY157938-1|AAN35200.1| 1751|Caenorhabditis elegans ANC-1 protein.
Length = 1751
Score = 32.7 bits (71), Expect = 0.20
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Frame = +3
Query: 192 YSEELAQESL--EWIRVITGEPENISGDMDNFYEVLKDGTLLCKLVNTI--QPNMVKKVN 359
+ +E AQ++ WI E + SG +++ +E ++DG LLC L+ + + V K
Sbjct: 19 HEDEKAQKNTFTRWINFHL-EEHSSSGRIEDLFEDIRDGVLLCHLIEVLTGEALAVHKGR 77
Query: 360 VSKMAFKCMENINAFLEAARQLGV 431
VSK + N+ L R+ G+
Sbjct: 78 VSKRVHH-IANLTTALTVLRRRGL 100
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 32.7 bits (71), Expect = 0.20
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Frame = +3
Query: 192 YSEELAQESL--EWIRVITGEPENISGDMDNFYEVLKDGTLLCKLVNTI--QPNMVKKVN 359
+ +E AQ++ WI E + SG +++ +E ++DG LLC L+ + + V K
Sbjct: 19 HEDEKAQKNTFTRWINFHL-EEHSSSGRIEDLFEDIRDGVLLCHLIEVLTGEALAVHKGR 77
Query: 360 VSKMAFKCMENINAFLEAARQLGV 431
VSK + N+ L R+ G+
Sbjct: 78 VSKRVHH-IANLTTALTVLRRRGL 100
>U64854-2|AAK77611.1| 2257|Caenorhabditis elegans Uncoordinated
protein 70, isoform a protein.
Length = 2257
Score = 31.9 bits (69), Expect = 0.35
Identities = 14/54 (25%), Positives = 27/54 (50%)
Frame = +3
Query: 258 ISGDMDNFYEVLKDGTLLCKLVNTIQPNMVKKVNVSKMAFKCMENINAFLEAAR 419
+S + + Y ++DG +L +L+ + + K KM C+EN+ L+ R
Sbjct: 57 VSCKVQDLYMDMRDGKMLLRLLAVLSGERLPKPTPGKMRIHCLENVEKGLQFLR 110
>U64854-1|AAK77612.2| 2302|Caenorhabditis elegans Uncoordinated
protein 70, isoform b protein.
Length = 2302
Score = 31.9 bits (69), Expect = 0.35
Identities = 14/54 (25%), Positives = 27/54 (50%)
Frame = +3
Query: 258 ISGDMDNFYEVLKDGTLLCKLVNTIQPNMVKKVNVSKMAFKCMENINAFLEAAR 419
+S + + Y ++DG +L +L+ + + K KM C+EN+ L+ R
Sbjct: 57 VSCKVQDLYMDMRDGKMLLRLLAVLSGERLPKPTPGKMRIHCLENVEKGLQFLR 110
>AF261891-1|AAF72996.1| 2257|Caenorhabditis elegans beta-spectrin
protein.
Length = 2257
Score = 31.9 bits (69), Expect = 0.35
Identities = 14/54 (25%), Positives = 27/54 (50%)
Frame = +3
Query: 258 ISGDMDNFYEVLKDGTLLCKLVNTIQPNMVKKVNVSKMAFKCMENINAFLEAAR 419
+S + + Y ++DG +L +L+ + + K KM C+EN+ L+ R
Sbjct: 57 VSCKVQDLYMDMRDGKMLLRLLAVLSGERLPKPTPGKMRIHCLENVEKGLQFLR 110
>AF166170-1|AAD49859.1| 2257|Caenorhabditis elegans beta-G spectrin
protein.
Length = 2257
Score = 31.9 bits (69), Expect = 0.35
Identities = 14/54 (25%), Positives = 27/54 (50%)
Frame = +3
Query: 258 ISGDMDNFYEVLKDGTLLCKLVNTIQPNMVKKVNVSKMAFKCMENINAFLEAAR 419
+S + + Y ++DG +L +L+ + + K KM C+EN+ L+ R
Sbjct: 57 VSCKVQDLYMDMRDGKMLLRLLAVLSGERLPKPTPGKMRIHCLENVEKGLQFLR 110
>AF166169-1|AAD49858.1| 2302|Caenorhabditis elegans beta-G spectrin
protein.
Length = 2302
Score = 31.9 bits (69), Expect = 0.35
Identities = 14/54 (25%), Positives = 27/54 (50%)
Frame = +3
Query: 258 ISGDMDNFYEVLKDGTLLCKLVNTIQPNMVKKVNVSKMAFKCMENINAFLEAAR 419
+S + + Y ++DG +L +L+ + + K KM C+EN+ L+ R
Sbjct: 57 VSCKVQDLYMDMRDGKMLLRLLAVLSGERLPKPTPGKMRIHCLENVEKGLQFLR 110
>AL032657-13|CAB76744.1| 87|Caenorhabditis elegans Hypothetical
protein Y47H9C.14 protein.
Length = 87
Score = 29.1 bits (62), Expect = 2.5
Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 5/49 (10%)
Frame = +1
Query: 379 NAWKTLTHSSRQRGNSACRL-----KKHSKPSIYGKDRTSIRLLSAFNR 510
NAWK H++ R N A R KKH SI G R I+ L F +
Sbjct: 11 NAWKPENHTNHNRNNKAHRNGITKPKKHIFLSIEGSRRQFIKSLRFFRK 59
>Z75552-2|CAA99944.1| 894|Caenorhabditis elegans Hypothetical
protein W04D2.1b protein.
Length = 894
Score = 28.3 bits (60), Expect = 4.4
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Frame = +3
Query: 198 EELAQES--LEWIRVITGEPENISGDMDNFYEVLKDGTLLCKLVNTIQPNMVKKVNVSKM 371
EEL+ L W + T N++ + NF+ KDG C L++ +P+++ + K
Sbjct: 148 EELSARDGLLLWCQRKTAPYNNVN--VQNFHNSWKDGLAFCALIHRHRPDLLDYSQLHK- 204
Query: 372 AFKCMENIN-AFLEAARQLGVP 434
+ N+N AF A + L +P
Sbjct: 205 -GDPIHNLNLAFDIAEKHLDIP 225
>Z75552-1|CAA99941.1| 920|Caenorhabditis elegans Hypothetical
protein W04D2.1a protein.
Length = 920
Score = 28.3 bits (60), Expect = 4.4
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Frame = +3
Query: 198 EELAQES--LEWIRVITGEPENISGDMDNFYEVLKDGTLLCKLVNTIQPNMVKKVNVSKM 371
EEL+ L W + T N++ + NF+ KDG C L++ +P+++ + K
Sbjct: 148 EELSARDGLLLWCQRKTAPYNNVN--VQNFHNSWKDGLAFCALIHRHRPDLLDYSQLHK- 204
Query: 372 AFKCMENIN-AFLEAARQLGVP 434
+ N+N AF A + L +P
Sbjct: 205 -GDPIHNLNLAFDIAEKHLDIP 225
>Z82268-12|CAL64003.1| 1210|Caenorhabditis elegans Hypothetical
protein Y37A1C.1c protein.
Length = 1210
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +3
Query: 255 NISGDMDNFYEVLKDGTLLCKLVNTI 332
NISGD+ N + + GTLL LV TI
Sbjct: 468 NISGDLANPQQAIPLGTLLAILVTTI 493
>Z82268-10|CAB05202.1| 972|Caenorhabditis elegans Hypothetical
protein Y37A1C.1a protein.
Length = 972
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +3
Query: 255 NISGDMDNFYEVLKDGTLLCKLVNTI 332
NISGD+ N + + GTLL LV TI
Sbjct: 468 NISGDLANPQQAIPLGTLLAILVTTI 493
>AL021476-3|CAL63996.1| 1210|Caenorhabditis elegans Hypothetical
protein Y37A1C.1c protein.
Length = 1210
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +3
Query: 255 NISGDMDNFYEVLKDGTLLCKLVNTI 332
NISGD+ N + + GTLL LV TI
Sbjct: 468 NISGDLANPQQAIPLGTLLAILVTTI 493
>AL021476-1|CAA16317.1| 972|Caenorhabditis elegans Hypothetical
protein Y37A1C.1a protein.
Length = 972
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +3
Query: 255 NISGDMDNFYEVLKDGTLLCKLVNTI 332
NISGD+ N + + GTLL LV TI
Sbjct: 468 NISGDLANPQQAIPLGTLLAILVTTI 493
>AC006633-5|AAO21429.1| 506|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 34,
isoform b protein.
Length = 506
Score = 27.9 bits (59), Expect = 5.8
Identities = 10/33 (30%), Positives = 21/33 (63%)
Frame = +3
Query: 267 DMDNFYEVLKDGTLLCKLVNTIQPNMVKKVNVS 365
+M++ YE + DG LC L++ +P+ + ++S
Sbjct: 197 EMEDLYEDISDGQCLCALLHWYRPHEMPVADIS 229
>AC006633-4|AAK68376.3| 1128|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 34,
isoform a protein.
Length = 1128
Score = 27.9 bits (59), Expect = 5.8
Identities = 10/33 (30%), Positives = 21/33 (63%)
Frame = +3
Query: 267 DMDNFYEVLKDGTLLCKLVNTIQPNMVKKVNVS 365
+M++ YE + DG LC L++ +P+ + ++S
Sbjct: 197 EMEDLYEDISDGQCLCALLHWYRPHEMPVADIS 229
>Z81552-4|CAB04488.2| 765|Caenorhabditis elegans Hypothetical
protein F56G4.6 protein.
Length = 765
Score = 27.5 bits (58), Expect = 7.6
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = +3
Query: 198 EELAQESLEWIRVITGEPE---NISGDMDNFYEVLKDGTLLCKLVNTIQPNMVKKVNVSK 368
E+LA E+LE I E E +++G M+N + D L C+ + I M +K ++ K
Sbjct: 277 EKLANETLEQFLQIQHESEEYPSVAGVMENLSKQNIDERLFCQKICLINDIMHEKYSILK 336
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,503,048
Number of Sequences: 27780
Number of extensions: 315082
Number of successful extensions: 929
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 893
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 922
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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