Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_E22
(593 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g47500.1 68415.m05929 kinesin motor protein-related 45 4e-05
At5g27000.1 68418.m03221 kinesin motor protein-related non-conse... 43 1e-04
At1g09170.1 68414.m01024 kinesin motor protein-related similar t... 39 0.002
At5g55400.1 68418.m06902 fimbrin-like protein, putative similar ... 38 0.007
At5g35700.1 68418.m04269 fimbrin-like protein, putative similar ... 37 0.009
At5g48460.1 68418.m05992 fimbrin-like protein, putative strong s... 37 0.012
At4g26700.1 68417.m03848 fimbrin-like protein (FIM1) identical t... 36 0.027
At2g04750.1 68415.m00485 fimbrin-like protein, putative similar ... 35 0.036
At3g44730.1 68416.m04814 kinesin motor protein-related similar t... 34 0.082
At5g41310.1 68418.m05020 kinesin motor protein-related 30 1.3
At1g63640.2 68414.m07198 kinesin motor protein-related C-termina... 29 1.8
At1g63640.1 68414.m07197 kinesin motor protein-related C-termina... 29 1.8
At1g55970.1 68414.m06419 histone acetyltransferase 4 (HAC4) simi... 29 3.1
At4g33790.1 68417.m04796 acyl CoA reductase, putative similar to... 28 5.4
At2g05420.1 68415.m00570 meprin and TRAF homology domain-contain... 27 7.1
At3g48290.1 68416.m05270 cytochrome P450, putative very strong s... 27 9.4
At1g72120.1 68414.m08336 proton-dependent oligopeptide transport... 27 9.4
>At2g47500.1 68415.m05929 kinesin motor protein-related
Length = 974
Score = 44.8 bits (101), Expect = 4e-05
Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 17/99 (17%)
Frame = +3
Query: 291 LKDGTLLCKLVNTIQPNMVKKVNVSK------------MAFKCMENINAFLEAARQLGVP 434
L+ G +LCK++N +QP V KV S AF+ EN+ FL A +++G P
Sbjct: 79 LRSGIILCKVLNKVQPGAVSKVVESPCDAILVADGAPLSAFQYFENVRNFLVAIQEMGFP 138
Query: 435 AQETFQTVDLWERQNLNSVVICLQSL-----GRKAGGFG 536
TF+ DL + N + VV C+ ++ +++GG G
Sbjct: 139 ---TFEASDLEQGGNASRVVNCVLAIKSYDEWKQSGGIG 174
>At5g27000.1 68418.m03221 kinesin motor protein-related
non-consensus AT donor splice site at exon 12;
non-consensus AC acceptor splice site at exon 13
Length = 987
Score = 43.2 bits (97), Expect = 1e-04
Identities = 39/175 (22%), Positives = 77/175 (44%), Gaps = 13/175 (7%)
Frame = +3
Query: 96 NFVIILVLNKMANNRATKSGFAAEAQRKINSKYSEELAQESLEWIRVITG--EPENISGD 269
+F ++ ++ + +++S RK+ S E+ W+R + G ++ G+
Sbjct: 12 SFSVVSIVEDVLQQHSSRSSDVGLVSRKVEE--SSLRRYEAAGWLRDMIGVSNGKDFPGE 69
Query: 270 M--DNFYEVLKDGTLLCKLVNTIQPNMVKKV---------NVSKMAFKCMENINAFLEAA 416
+ F L+ G +LC ++N + P V KV + AF+ ENI FL A
Sbjct: 70 PSEEEFRLGLRSGIVLCNVLNKVNPGSVSKVVEAPDDVADGAALSAFQYFENIRNFLVAI 129
Query: 417 RQLGVPAQETFQTVDLWERQNLNSVVICLQSLGRKAGGFGKPSIGPKEAEKNVRN 581
++G+P +F+ D+ + +V C+ +L + K GP N+++
Sbjct: 130 EEMGLP---SFEASDMEKGGKSIRIVNCILALKSYSEWKLKGENGPWRYGSNMKH 181
>At1g09170.1 68414.m01024 kinesin motor protein-related similar to
GB:AAB61066
Length = 1010
Score = 39.1 bits (87), Expect = 0.002
Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 16/116 (13%)
Frame = +3
Query: 213 ESLEWIR----VITGEPENISGDMDNFYEVLKDGTLLCKLVNTIQPNMVKKV-------- 356
E+ W+R V+ G ++F L+ G LLC ++N ++P V KV
Sbjct: 59 EAARWVRNTLGVVGGRDLPADPSEEDFRIALRSGILLCNVLNRVKPGAVPKVVEAPNDPL 118
Query: 357 ----NVSKMAFKCMENINAFLEAARQLGVPAQETFQTVDLWERQNLNSVVICLQSL 512
+ AF+ EN+ FL ++G+P TF+ D + +V C+ +L
Sbjct: 119 VNQDGAALSAFQYFENLRNFLVFVEEMGIP---TFEVSDFEKGGKSARIVECVLAL 171
>At5g55400.1 68418.m06902 fimbrin-like protein, putative similar to
fimbrin-like protein (ATFIM1) [Arabidopsis thaliana]
GI:2905893; contains Pfam profile PF00307: Calponin
homology (CH) domain
Length = 714
Score = 37.5 bits (83), Expect = 0.007
Identities = 19/58 (32%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Frame = +3
Query: 267 DMDNFYEVLKDGTLLCKLVNTIQPNMV--KKVNVSKM--AFKCMENINAFLEAARQLG 428
D ++ YE++KDG LLCKL+N P + + +N ++ ++ EN L +A+ +G
Sbjct: 153 DSNDLYELVKDGVLLCKLINIAVPGTIDERAINTKRVLNPWERNENHTLCLNSAKAVG 210
>At5g35700.1 68418.m04269 fimbrin-like protein, putative similar to
fimbrin-like protein (ATFIM1) [Arabidopsis thaliana]
GI:2905893, fimbrin [Schizosaccharomyces pombe]
GI:3057144; contains Pfam profile PF00307: Calponin
homology (CH) domain
Length = 687
Score = 37.1 bits (82), Expect = 0.009
Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Frame = +3
Query: 279 FYEVLKDGTLLCKLVNTIQPNMV--KKVNVSKM--AFKCMENINAFLEAARQLG 428
F++++KDG LLCKL+N P + + +N K ++ EN+ L +A+ +G
Sbjct: 155 FFDLVKDGVLLCKLINVAVPGTIDERAINTKKTLNPWERNENLTLGLNSAKAIG 208
>At5g48460.1 68418.m05992 fimbrin-like protein, putative strong
similarity to fimbrin-like protein AtFim2 [Arabidopsis
thaliana] GI:2737926; contains Pfam profile PF00307:
Calponin homology (CH) domain
Length = 654
Score = 36.7 bits (81), Expect = 0.012
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Frame = +3
Query: 258 ISGDMDNFYEVLKDGTLLCKLVNTIQPNMV--KKVNVSKM--AFKCMENINAFLEAARQL 425
I+ ++ +EV KDG LLCKL+N P + + +N M ++ EN L +A+ +
Sbjct: 150 INPSSNDLFEVAKDGVLLCKLINVAVPGTIDERAINTKSMLNPWERNENHTLCLNSAKAI 209
Query: 426 G 428
G
Sbjct: 210 G 210
>At4g26700.1 68417.m03848 fimbrin-like protein (FIM1) identical to
fimbrin-like protein (ATFIM1) [Arabidopsis thaliana]
GI:2905893
Length = 687
Score = 35.5 bits (78), Expect = 0.027
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Frame = +3
Query: 273 DNFYEVLKDGTLLCKLVNTIQPNMV--KKVNVSKM--AFKCMENINAFLEAARQLG 428
+ YE++KDG LLCKL+N P + + +N ++ ++ EN L +A+ +G
Sbjct: 154 NQLYELVKDGVLLCKLINVAVPGTIDERAINTKRVLNPWERNENHTLCLNSAKAVG 209
>At2g04750.1 68415.m00485 fimbrin-like protein, putative similar to
fimbrin-like protein (ATFIM1) [Arabidopsis thaliana]
GI:2905893; contains Pfam profile PF00307: Calponin
homology (CH) domain
Length = 652
Score = 35.1 bits (77), Expect = 0.036
Identities = 17/53 (32%), Positives = 32/53 (60%), Gaps = 4/53 (7%)
Frame = +3
Query: 282 YEVLKDGTLLCKLVNTIQPNMV--KKVNVSK--MAFKCMENINAFLEAARQLG 428
++++KDG LLCKL+N P + + +N K ++ EN++ L +A+ +G
Sbjct: 150 FDLVKDGVLLCKLINIAVPGTIDERAINTKKELNPWERTENLSLCLNSAKAIG 202
>At3g44730.1 68416.m04814 kinesin motor protein-related similar to 4
other kinesin-like proteins of A. thaliana: F02P16.12
(PID:g2191180), katA (D11371), katB (D21137), and katC
(D21138); contains non-consensus AT-AC splice sites at
intron 10
Length = 1087
Score = 33.9 bits (74), Expect = 0.082
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 18/106 (16%)
Frame = +3
Query: 273 DNFYEVLKDGTLLCKLVNTIQPNMVKKV-------------NVSKMAFKCMENINAFLEA 413
D F L++G +LC ++N + P V KV ++ A + EN+ FL+A
Sbjct: 16 DEFSLALRNGLILCNVLNKVNPGSVLKVVENPITPAIQYADGAAQSAIQYFENMRNFLKA 75
Query: 414 ARQLGVPAQETFQTVDLWERQNLNSVVICLQSL-----GRKAGGFG 536
+ + TF DL + + N VV C+ L ++AGG G
Sbjct: 76 VEDMQL---LTFGASDLEKGGSSNKVVDCILCLKGFYEWKQAGGVG 118
>At5g41310.1 68418.m05020 kinesin motor protein-related
Length = 961
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = +3
Query: 291 LKDGTLLCKLVNTIQPNMVKKVNVSKMAFKCMENINAFLEAARQLGVPAQETFQTV 458
L DGT+LC L+N + P ++ + C+ NI FL A ++ +P E+ + +
Sbjct: 72 LVDGTVLCNLLNQLSPGSMRMGGSFEPG--CV-NIERFLAAMDEMTLPRFESLKAL 124
>At1g63640.2 68414.m07198 kinesin motor protein-related C-terminal
region is similar to C-term region of kinesin motor
protein GB:AAB51397 (Mus musculus); contains Pfam
profile: PF00225 Kinesin motor domain
Length = 1065
Score = 29.5 bits (63), Expect = 1.8
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +3
Query: 273 DNFYEVLKDGTLLCKLVNTIQPNMVKKVNVSKMAFKCMENINAFLEAARQLGVPAQE 443
D L+DGT+LC L+N + P ++ + A I FL A ++ +P E
Sbjct: 65 DELRACLRDGTVLCSLLNQLSPGSMRMGGSFEPA---SVKIERFLTAMDEMALPRFE 118
>At1g63640.1 68414.m07197 kinesin motor protein-related C-terminal
region is similar to C-term region of kinesin motor
protein GB:AAB51397 (Mus musculus); contains Pfam
profile: PF00225 Kinesin motor domain
Length = 1064
Score = 29.5 bits (63), Expect = 1.8
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +3
Query: 273 DNFYEVLKDGTLLCKLVNTIQPNMVKKVNVSKMAFKCMENINAFLEAARQLGVPAQE 443
D L+DGT+LC L+N + P ++ + A I FL A ++ +P E
Sbjct: 65 DELRACLRDGTVLCSLLNQLSPGSMRMGGSFEPA---SVKIERFLTAMDEMALPRFE 118
>At1g55970.1 68414.m06419 histone acetyltransferase 4 (HAC4) similar
to CREB-binding protein GB:AAC51770 GI:2443859 from [Homo
sapiens]; contains Pfam PF02135: TAZ zinc finger profile;
contains Pfam PF00569: Zinc finger, ZZ type domain;
identical to histone acetyltransferase HAC4 (GI:14794966)
{Arabidopsis thaliana}
Length = 1456
Score = 28.7 bits (61), Expect = 3.1
Identities = 22/80 (27%), Positives = 35/80 (43%)
Frame = +3
Query: 354 VNVSKMAFKCMENINAFLEAARQLGVPAQETFQTVDLWERQNLNSVVICLQSLGRKAGGF 533
V V K +E FLE R+ P++ +++ ++ Q + +V +CL G F
Sbjct: 905 VRVVASVDKVLEVKERFLELFREENYPSEFPYKSKAIFLFQKIENVEVCL--FGMFVQEF 962
Query: 534 GKPSIGPKEAEKNVRNFSEE 593
G S GP + R S E
Sbjct: 963 GTDS-GPPNERRTFRTVSGE 981
>At4g33790.1 68417.m04796 acyl CoA reductase, putative similar to
acyl CoA reductase [Simmondsia chinensis] GI:5020215;
contains Pfam profile PF03015: Male sterility protein;
No start codon identified, may contain anomalous
splicing at 5' end.
Length = 380
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 180 INSKYSEELAQESLEWIRVITGEPENISGDM 272
++ Y ++L QE L+ +RVI PE I+ M
Sbjct: 81 LDINYEKKLVQEKLDQLRVIGAAPETITETM 111
>At2g05420.1 68415.m00570 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein similar to
ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471; contains Pfam profile PF00917: MATH domain
Length = 297
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 235 LSPANPKTFPVIWTTSMKYSKT 300
L+ AN K+FP+ WT K+S T
Sbjct: 63 LNVANSKSFPIGWTRHTKFSLT 84
>At3g48290.1 68416.m05270 cytochrome P450, putative very strong
similarity to Cytochrome P450 71A24
(SP:Q9STK9)[Arabidopsis thaliana];
Length = 488
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/28 (42%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +3
Query: 219 LEWIRVITGEPENISGDMDNFYE-VLKD 299
++WIR + G+ IS D+D F E V++D
Sbjct: 223 IDWIRGLDGQLIKISNDLDEFLERVVQD 250
>At1g72120.1 68414.m08336 proton-dependent oligopeptide transport
(POT) family protein contains Pfam profile: PF00854 POT
family
Length = 1095
Score = 27.1 bits (57), Expect = 9.4
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +2
Query: 47 VTTSLRTY-RVL*FYLLKFCYYISFKQNGQQPCNQVWICRRSAEKDQQ 187
VT+S ++ VL F+ L Y ++ Q+G +PC Q + + EKD Q
Sbjct: 131 VTSSTSSFLNVLFFFSL---YLVAIGQSGHKPCVQAFGADQFDEKDSQ 175
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,649,588
Number of Sequences: 28952
Number of extensions: 288371
Number of successful extensions: 828
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 805
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 827
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1180950720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -