Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_E20
(512 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g34220.1 68417.m04862 leucine-rich repeat transmembrane prote... 31 0.46
At5g55210.1 68418.m06882 expressed protein similar to unknown pr... 30 1.1
At2g05645.1 68415.m00604 hypothetical protein 30 1.1
At1g66220.1 68414.m07516 subtilase family protein contains simil... 29 2.4
At5g43190.1 68418.m05276 F-box family protein (FBX6) contains si... 28 3.2
At1g48690.1 68414.m05449 auxin-responsive GH3 family protein sim... 28 3.2
At5g10710.2 68418.m01241 expressed protein 28 4.2
At5g10710.1 68418.m01240 expressed protein 28 4.2
At2g16950.1 68415.m01953 importin beta-2 subunit family protein ... 28 4.2
At1g72800.1 68414.m08416 nuM1-related contains similarity with n... 28 4.2
At4g29200.1 68417.m04177 hypothetical protein 27 5.6
At2g34210.1 68415.m04186 KOW domain-containing transcription fac... 27 5.6
At1g65180.1 68414.m07390 DC1 domain-containing protein contains ... 27 5.6
At1g50940.1 68414.m05727 electron transfer flavoprotein alpha su... 27 5.6
At1g08210.1 68414.m00907 aspartyl protease family protein contai... 27 5.6
At3g01200.1 68416.m00026 expressed protein contains Pfam domain ... 27 7.4
At1g23300.1 68414.m02914 MATE efflux family protein similar to r... 27 7.4
At4g02560.1 68417.m00350 homeobox protein LUMINIDEPENDENS (LD) i... 27 9.8
At2g48050.1 68415.m06014 expressed protein ; expression supporte... 27 9.8
>At4g34220.1 68417.m04862 leucine-rich repeat transmembrane protein
kinase, putative protein kinase TMKL1, Arabidopsis
thaliana, PID:E353150
Length = 757
Score = 31.1 bits (67), Expect = 0.46
Identities = 22/74 (29%), Positives = 38/74 (51%)
Frame = -3
Query: 507 NSTDKRISPSLVDISIDGKTIPVLTGVTMTNIWRGKPPRVPRGNRSLCGKPRRLLYHQLS 328
N +K + + VD+S + T P+ + +++ N + GN+ LCGKP ++L S
Sbjct: 238 NFAEKFPANATVDLSFNNLTGPIPSSLSLLN----QKAESFSGNQELCGKPLKILCSIPS 293
Query: 327 MLLKPVPVVSKPFS 286
L P P +S+ S
Sbjct: 294 TLSNP-PNISETTS 306
>At5g55210.1 68418.m06882 expressed protein similar to unknown
protein (pir||T04913)
Length = 168
Score = 29.9 bits (64), Expect = 1.1
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +3
Query: 195 INSTLVRTTSSAARSRCTAL-SNRDRGLKTYWKKVSTQLEQVSRASRVGG 341
+ S L RT+S + TA+ S R R K W +VST V RAS+ G
Sbjct: 4 VGSRLSRTSSRYSGPAATAVFSGRVRKWKKKWVRVSTSSVGVFRASKSNG 53
>At2g05645.1 68415.m00604 hypothetical protein
Length = 204
Score = 29.9 bits (64), Expect = 1.1
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = -3
Query: 339 HQLSMLLKPVPVVSKPFSNMFLVHG 265
H+ +LL P P++S P S+MF+ HG
Sbjct: 130 HRPFVLLMPRPLLSSPHSHMFVEHG 154
>At1g66220.1 68414.m07516 subtilase family protein contains
similarity to subtilase; SP1 GI:9957714 from [Oryza
sativa]; contains Pfam profiles: PF00082 Subtilase
family (3 copies)
Length = 753
Score = 28.7 bits (61), Expect = 2.4
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -3
Query: 510 YNSTDKRISPSLVDISIDGKTIPVLTG-VTMTNIWRGKPP 394
YN T + PS++D ++ TIP LTG VT+T R P
Sbjct: 638 YNCTSPK--PSMLDFNLPSITIPSLTGEVTVTRTVRNVGP 675
>At5g43190.1 68418.m05276 F-box family protein (FBX6) contains
similarity to unusual floral organs (UFO) GI:4376159
from [Arabidopsis thaliana]
Length = 403
Score = 28.3 bits (60), Expect = 3.2
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +3
Query: 108 LLVPNTIAWAAS*ASMTNALTCSKSIASSINSTLVRTTSSAARS 239
L PN I+W + +LTC+ S+ SS N L + S ++ S
Sbjct: 112 LFNPNLISWCTLPLPRSLSLTCASSLLSSSNGLLCFSLSPSSVS 155
>At1g48690.1 68414.m05449 auxin-responsive GH3 family protein
similar to auxin-responsive GH3 product [Glycine max]
GI:18591; contains Pfam profile PF03321: GH3
auxin-responsive promoter
Length = 190
Score = 28.3 bits (60), Expect = 3.2
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -3
Query: 318 KPVPVVSKPFSNMFLVHGLCSIT 250
K PV +K F NM +H LCS T
Sbjct: 99 KIFPVNNKYFENMIFIHALCSST 121
>At5g10710.2 68418.m01241 expressed protein
Length = 312
Score = 27.9 bits (59), Expect = 4.2
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = -2
Query: 217 VLTSVEFIDEAIDFEHVKAFVIDAHEAAHAIVFGTNKYTNDCVNSLI*HNIDRHLERLVI 38
VL S F+++ I EH F + + + ++F K D V L+ +DR + +I
Sbjct: 142 VLESKSFLEKMIVLEHTIPFFLPLSDLENDLLFSNAKKFIDNVGDLLQAYVDRKEQVRLI 201
Query: 37 K 35
K
Sbjct: 202 K 202
>At5g10710.1 68418.m01240 expressed protein
Length = 312
Score = 27.9 bits (59), Expect = 4.2
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = -2
Query: 217 VLTSVEFIDEAIDFEHVKAFVIDAHEAAHAIVFGTNKYTNDCVNSLI*HNIDRHLERLVI 38
VL S F+++ I EH F + + + ++F K D V L+ +DR + +I
Sbjct: 142 VLESKSFLEKMIVLEHTIPFFLPLSDLENDLLFSNAKKFIDNVGDLLQAYVDRKEQVRLI 201
Query: 37 K 35
K
Sbjct: 202 K 202
>At2g16950.1 68415.m01953 importin beta-2 subunit family protein
similar to SP|Q92973 Importin beta-2 subunit
(Transportin) {Homo sapiens}; contains Pfam profile
PF03810: Importin-beta N-terminal domain
Length = 891
Score = 27.9 bits (59), Expect = 4.2
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -3
Query: 108 NIRTTASTALSDITSIDTLKGW 43
NIRTT T +S I +I+ + GW
Sbjct: 109 NIRTTVGTIISVIVNIEGVSGW 130
>At1g72800.1 68414.m08416 nuM1-related contains similarity with nuM1
GI:1279563 from [Medicago sativa]
Length = 335
Score = 27.9 bits (59), Expect = 4.2
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Frame = -2
Query: 424 DDEHLERQTAEGSER*QKPVRKAKATLIPP-TLDALETCS---SCVETFFQYVFSPRSLF 257
DD +++ + + S ++PV K A+ P T D+L + + ++ F F P SLF
Sbjct: 109 DDSYMDTSSEDESSSAEEPVNKPAASAAKPATKDSLFSAGFKPAAKDSLFSAGFKPDSLF 168
Query: 256 DNAVHLERAADDVVLTS 206
+ E AA D + ++
Sbjct: 169 --SAGFEPAAKDSLFSA 183
>At4g29200.1 68417.m04177 hypothetical protein
Length = 457
Score = 27.5 bits (58), Expect = 5.6
Identities = 16/60 (26%), Positives = 31/60 (51%)
Frame = +3
Query: 6 IWSTLRVCGVLITSLSRCLSMLCQIRLLTQSFVYLLVPNTIAWAAS*ASMTNALTCSKSI 185
I+ L C VL L CL L + + + F+++++ NT+ A N+++C+ S+
Sbjct: 399 IYCDLTCCTVL---LCLCLKALMEFKSMHFIFLFMVLGNTVCCNALIFEFLNSISCNCSM 455
>At2g34210.1 68415.m04186 KOW domain-containing transcription factor
family protein
Length = 990
Score = 27.5 bits (58), Expect = 5.6
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = +2
Query: 77 DKAVDAVVRIFIGPKYDCMGRLMSINDKRLDMLEIDSFVYKLDTGKNNIVRSSL 238
D V V+I +GP GRL+ + DK L +E+++ K+ TGK + R ++
Sbjct: 683 DHLVGTYVKIRLGPFKGYSGRLVEVKDK-LVRVELEA---KIVTGKLHFERKAI 732
>At1g65180.1 68414.m07390 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 653
Score = 27.5 bits (58), Expect = 5.6
Identities = 13/25 (52%), Positives = 14/25 (56%), Gaps = 2/25 (8%)
Frame = -3
Query: 405 GKPPRVPRGNRSLCGKP--RRLLYH 337
GKPP GN SLCGK + YH
Sbjct: 186 GKPPAYTDGNCSLCGKKIFDEMFYH 210
>At1g50940.1 68414.m05727 electron transfer flavoprotein alpha
subunit family protein contains Pfam profile: PF00766
electron transfer flavoprotein, alpha subunit
Length = 363
Score = 27.5 bits (58), Expect = 5.6
Identities = 22/71 (30%), Positives = 35/71 (49%)
Frame = +3
Query: 21 RVCGVLITSLSRCLSMLCQIRLLTQSFVYLLVPNTIAWAAS*ASMTNALTCSKSIASSIN 200
R + ITSLSRC+S L +L + + P T++ + S+ + + S +A S
Sbjct: 22 RSISISITSLSRCISTL----ILAEHESGTIKPQTVSTVVAANSLGESSSISLLLAGS-G 76
Query: 201 STLVRTTSSAA 233
S+L S AA
Sbjct: 77 SSLQEAASQAA 87
>At1g08210.1 68414.m00907 aspartyl protease family protein contains
Pfam profile PF00026: Eukaryotic aspartyl protease;
similar to CND41, chloroplast nucleoid DNA binding
protein (GI:2541876) {Nicotiana tabacum}
Length = 492
Score = 27.5 bits (58), Expect = 5.6
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -3
Query: 477 LVDISIDGKTIPVLTGVTMTNIWRGKPPR 391
+V+ +DG + P L G+ T + G PPR
Sbjct: 67 VVNFPVDGASDPFLVGLYYTKVKLGTPPR 95
>At3g01200.1 68416.m00026 expressed protein contains Pfam domain
PF03618: Domain of unknown function (DUF299)
Length = 377
Score = 27.1 bits (57), Expect = 7.4
Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Frame = +2
Query: 134 GRLMSINDKRLDMLEIDSFVYKLDTG--KNNIVRSSLEMHGVIE--QRPWTKNILEKGFD 301
GR+ ++ND +E F K D G N+ ++ + + GV + P + I +KG+
Sbjct: 202 GRVKTLNDAYFKRIEAIEFTIKQDDGTLPENLSKADIVLVGVSRTGKTPLSTYIAQKGYK 261
Query: 302 TTGTGF 319
F
Sbjct: 262 VANVPF 267
>At1g23300.1 68414.m02914 MATE efflux family protein similar to
ripening regulated protein DDTFR18 [Lycopersicon
esculentum] GI:12231296; contains Pfam profile PF01554:
Uncharacterized membrane protein family
Length = 515
Score = 27.1 bits (57), Expect = 7.4
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = -3
Query: 495 KRISPSLVDISIDGKTIPVLTGVTMTNIWRGKPPRVPRGNRSLCGKP 355
K+++P L + PVL+GV + W+G V G LCG P
Sbjct: 387 KQLTPLLALTIVINNIQPVLSGVAVGAGWQGIVAYVNIGCYYLCGIP 433
>At4g02560.1 68417.m00350 homeobox protein LUMINIDEPENDENS (LD)
identical to Homeobox protein LUMINIDEPENDENS
(Swiss-Prot:Q38796) [Arabidopsis thaliana]
Length = 953
Score = 26.6 bits (56), Expect = 9.8
Identities = 10/44 (22%), Positives = 26/44 (59%)
Frame = +3
Query: 201 STLVRTTSSAARSRCTALSNRDRGLKTYWKKVSTQLEQVSRASR 332
S ++++ + R + +SNR +GL + W K+ +++ + + +R
Sbjct: 278 SAILQSVNGLRFYRISDISNRAKGLLSRWTKLFAKIQAMKKQNR 321
>At2g48050.1 68415.m06014 expressed protein ; expression supported by
MPSS
Length = 1500
Score = 26.6 bits (56), Expect = 9.8
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +1
Query: 283 IGKRFRHNWNRFQEHRELV 339
IG+ FRH W+R Q + ++V
Sbjct: 980 IGRIFRHIWSRMQSNNDIV 998
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,629,837
Number of Sequences: 28952
Number of extensions: 208610
Number of successful extensions: 664
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 650
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 663
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 927799552
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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